RNA–Protein interactions for RNA: ENST00000597777.1

FARP1-222, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

Gene FARP1, Length 3,841 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-222	ENST00000597777	MYH2	Q9UKX2	1941 aa		11.24	□□□□□ -0.61
FARP1-222	ENST00000597777		E7EWF7	191 aa		11.24	□□□□□ -0.61
FARP1-222	ENST00000597777	RIMBP2	O15034	1052 aa		11.24	□□□□□ -0.61
FARP1-222	ENST00000597777	ZBTB43	O43298	467 aa		11.24	□□□□□ -0.61
FARP1-222	ENST00000597777	PRKAB2	O43741	272 aa		11.24	□□□□□ -0.61
FARP1-222	ENST00000597777	C21orf2	O43822	256 aa		11.24	□□□□□ -0.61
FARP1-222	ENST00000597777	FGA	P02671	866 aa		11.24	□□□□□ -0.61
FARP1-222	ENST00000597777	PTPN14	Q15678	1187 aa		11.24	□□□□□ -0.61
FARP1-222	ENST00000597777	FAM200A	Q8TCP9	573 aa		11.24	□□□□□ -0.61
FARP1-222	ENST00000597777	PYCARD	Q9ULZ3	195 aa		11.24	□□□□□ -0.61
FARP1-222	ENST00000597777	FOCAD	Q5VW36	1801 aa		11.24	□□□□□ -0.61
FARP1-222	ENST00000597777	LETM1	O95202	739 aa	Predicted RBP	11.24	□□□□□ -0.61
FARP1-222	ENST00000597777	PPP4C	P60510	307 aa		11.24	□□□□□ -0.61
FARP1-222	ENST00000597777	SCRN1	Q12765	414 aa		11.24	□□□□□ -0.61
FARP1-222	ENST00000597777	NAA30	Q147X3	362 aa	Predicted RBP	11.24	□□□□□ -0.61
FARP1-222	ENST00000597777	LCORL	Q8N3X6	602 aa		11.24	□□□□□ -0.61
FARP1-222	ENST00000597777	DHX58	Q96C10	678 aa		11.24	□□□□□ -0.61
FARP1-222	ENST00000597777	MROH7-TTC4	A0A0A0MT08	1334 aa		11.24	□□□□□ -0.61
FARP1-222	ENST00000597777	ECM2	O94769	699 aa	Predicted RBP	11.24	□□□□□ -0.61
FARP1-222	ENST00000597777	FAM193A	P78312	1265 aa		11.24	□□□□□ -0.61
FARP1-222	ENST00000597777	PICALM	Q13492	652 aa		11.24	□□□□□ -0.61
FARP1-222	ENST00000597777	MFSD14B	Q5SR56	506 aa		11.24	□□□□□ -0.61
FARP1-222	ENST00000597777	STRIP1	Q5VSL9	837 aa		11.24	□□□□□ -0.61
FARP1-222	ENST00000597777	PSD	A5PKW4	1024 aa	Predicted RBP	11.23	□□□□□ -0.61
FARP1-222	ENST00000597777	IFNL3	Q8IZI9	196 aa		11.23	□□□□□ -0.61
FARP1-222	ENST00000597777	SPON1	Q9HCB6	807 aa		11.23	□□□□□ -0.61
FARP1-222	ENST00000597777	SAP30BP	Q9UHR5	308 aa	Known RBP	11.23	□□□□□ -0.61
FARP1-222	ENST00000597777	GAK	O14976	1311 aa		11.23	□□□□□ -0.61
FARP1-222	ENST00000597777	WDR19	Q8NEZ3	1342 aa		11.23	□□□□□ -0.61
FARP1-222	ENST00000597777	DDX60L	Q5H9U9	1706 aa	Known RBP	11.23	□□□□□ -0.61
FARP1-222	ENST00000597777	TSPY2	A6NKD2	308 aa		11.23	□□□□□ -0.61
FARP1-222	ENST00000597777	GSG1L2	A8MUP6	293 aa		11.23	□□□□□ -0.61
FARP1-222	ENST00000597777	SYK	P43405	635 aa		11.23	□□□□□ -0.61
FARP1-222	ENST00000597777	FAM47A	Q5JRC9	791 aa		11.23	□□□□□ -0.61
FARP1-222	ENST00000597777	MRI	Q9BWK5	157 aa		11.23	□□□□□ -0.61
FARP1-222	ENST00000597777	NAV1	Q8NEY1	1877 aa		11.23	□□□□□ -0.61
FARP1-222	ENST00000597777	VGLL3	A8MV65	326 aa		11.23	□□□□□ -0.61
FARP1-222	ENST00000597777	ECE2	O60344	883 aa		11.23	□□□□□ -0.61
FARP1-222	ENST00000597777	BAG3	O95817	575 aa		11.23	□□□□□ -0.61
FARP1-222	ENST00000597777	CDC25A	P30304	524 aa		11.23	□□□□□ -0.61
FARP1-222	ENST00000597777	KARS	Q15046	597 aa	Known RBP	11.23	□□□□□ -0.61
FARP1-222	ENST00000597777	CCDC34	Q96HJ3	373 aa		11.23	□□□□□ -0.61
FARP1-222	ENST00000597777	INTS4	Q96HW7	963 aa	Known RBP	11.23	□□□□□ -0.61
FARP1-222	ENST00000597777	CRNKL1	Q9BZJ0	848 aa	Known RBP	11.23	□□□□□ -0.61
FARP1-222	ENST00000597777	LTBP3	Q9NS15	1303 aa		11.23	□□□□□ -0.61
FARP1-222	ENST00000597777	CDK5RAP2	Q96SN8	1893 aa		11.22	□□□□□ -0.61
FARP1-222	ENST00000597777	NT5C2	P49902	561 aa		11.22	□□□□□ -0.61
FARP1-222	ENST00000597777	GTF2I	P78347	998 aa		11.22	□□□□□ -0.61
FARP1-222	ENST00000597777	TEX35	Q5T0J7	233 aa		11.22	□□□□□ -0.61
FARP1-222	ENST00000597777	FBXL16	Q8N461	479 aa		11.22	□□□□□ -0.61
FARP1-222	ENST00000597777	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	11.22	□□□□□ -0.61
FARP1-222	ENST00000597777	CABP5	Q9NP86	173 aa		11.22	□□□□□ -0.61
FARP1-222	ENST00000597777	ATP8A2	Q9NTI2	1148 aa		11.22	□□□□□ -0.61
FARP1-222	ENST00000597777	SPTLC2	O15270	562 aa		11.22	□□□□□ -0.61
FARP1-222	ENST00000597777	PLCG2	P16885	1265 aa		11.22	□□□□□ -0.61
FARP1-222	ENST00000597777	SMAP1	Q8IYB5	467 aa	Predicted RBP	11.22	□□□□□ -0.61
FARP1-222	ENST00000597777	ANAPC4	Q9UJX5	808 aa		11.22	□□□□□ -0.61
FARP1-222	ENST00000597777	UBE2Q2L	H0YL09	131 aa		11.22	□□□□□ -0.61
FARP1-222	ENST00000597777	DOK7	Q18PE1	504 aa		11.22	□□□□□ -0.61
FARP1-222	ENST00000597777	TSR1	Q2NL82	804 aa	Known RBP	11.22	□□□□□ -0.61
FARP1-222	ENST00000597777	ANO10	Q9NW15	660 aa		11.22	□□□□□ -0.61
FARP1-222	ENST00000597777	SCN9A	Q15858	1988 aa		11.22	□□□□□ -0.61
FARP1-222	ENST00000597777	GPR75-ASB3	A0A0A6YYF3	556 aa		11.21	□□□□□ -0.61
FARP1-222	ENST00000597777	PC	P11498	1178 aa	Known RBP	11.21	□□□□□ -0.61
FARP1-222	ENST00000597777	NLRP5	P59047	1200 aa		11.21	□□□□□ -0.61
FARP1-222	ENST00000597777	HDLBP	Q00341	1268 aa	Known RBP	11.21	□□□□□ -0.61
FARP1-222	ENST00000597777	GRAMD1C	Q8IYS0	662 aa		11.21	□□□□□ -0.61
FARP1-222	ENST00000597777	TANGO6	Q9C0B7	1094 aa		11.21	□□□□□ -0.61
FARP1-222	ENST00000597777	MYO3B	Q8WXR4	1341 aa		11.21	□□□□□ -0.61
FARP1-222	ENST00000597777	USP17L3	A6NCW0	530 aa		11.21	□□□□□ -0.61
FARP1-222	ENST00000597777	USP17L4	A6NCW7	530 aa		11.21	□□□□□ -0.61
FARP1-222	ENST00000597777	PPIP5K2	O43314	1243 aa		11.21	□□□□□ -0.61
FARP1-222	ENST00000597777	SSRP1	Q08945	709 aa	Known RBP	11.21	□□□□□ -0.61
FARP1-222	ENST00000597777	WTAP	Q15007	396 aa		11.21	□□□□□ -0.61
FARP1-222	ENST00000597777	ZNF174	Q15697	407 aa		11.21	□□□□□ -0.61
FARP1-222	ENST00000597777	AOC3	Q16853	763 aa		11.21	□□□□□ -0.61
FARP1-222	ENST00000597777	USP17L1	Q7RTZ2	530 aa		11.21	□□□□□ -0.61
FARP1-222	ENST00000597777	AMOTL1	Q8IY63	956 aa		11.21	□□□□□ -0.61
FARP1-222	ENST00000597777	AATF	Q9NY61	560 aa	Known RBP eCLIP	11.21	□□□□□ -0.61
FARP1-222	ENST00000597777	DNAI1	Q9UI46	699 aa		11.21	□□□□□ -0.61
FARP1-222	ENST00000597777	IDE	P14735	1019 aa		11.21	□□□□□ -0.62
FARP1-222	ENST00000597777	DRC1	Q96MC2	740 aa		11.21	□□□□□ -0.62
FARP1-222	ENST00000597777	DDX19A	Q9NUU7	478 aa	Known RBP	11.21	□□□□□ -0.62
FARP1-222	ENST00000597777	CLIC4	Q9Y696	253 aa		11.21	□□□□□ -0.62
FARP1-222	ENST00000597777	ECM29	Q5VYK3	1845 aa		11.21	□□□□□ -0.62
FARP1-222	ENST00000597777	U2AF2	P26368	475 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
FARP1-222	ENST00000597777	HMGN5	P82970	282 aa	Known RBP	11.2	□□□□□ -0.62
FARP1-222	ENST00000597777	DACT2	Q5SW24	774 aa		11.2	□□□□□ -0.62
FARP1-222	ENST00000597777	HHIPL2	Q6UWX4	724 aa		11.2	□□□□□ -0.62
FARP1-222	ENST00000597777	STOX1	Q6ZVD7	989 aa		11.2	□□□□□ -0.62
FARP1-222	ENST00000597777	MRPS27	Q92552	414 aa	Known RBP	11.2	□□□□□ -0.62
FARP1-222	ENST00000597777	DBNDD1	Q9H9R9	158 aa		11.2	□□□□□ -0.62
FARP1-222	ENST00000597777	XBP1	P17861	261 aa		11.2	□□□□□ -0.62
FARP1-222	ENST00000597777	CASP1	P29466	404 aa		11.2	□□□□□ -0.62
FARP1-222	ENST00000597777	GRIK5	Q16478	980 aa		11.2	□□□□□ -0.62
FARP1-222	ENST00000597777	PLEKHA4	Q9H4M7	779 aa		11.2	□□□□□ -0.62
FARP1-222	ENST00000597777	CNNM2	Q9H8M5	875 aa		11.2	□□□□□ -0.62
FARP1-222	ENST00000597777	VPS54	Q9P1Q0	977 aa		11.2	□□□□□ -0.62
FARP1-222	ENST00000597777	TOP1	P11387	765 aa	Known RBP	11.2	□□□□□ -0.62
FARP1-222	ENST00000597777	DYNLL1	P63167	89 aa	Known RBP	11.2	□□□□□ -0.62

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