RNA–Protein interactions for RNA: ENST00000597596.1

FARP1-221, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-221ENST00000597596 USP17L12C9JPN9 530 aa7.36□□□□□ -1.23
FARP1-221ENST00000597596 USP17L11C9JVI0 530 aa7.36□□□□□ -1.23
FARP1-221ENST00000597596 USP17L21D6R901 530 aa7.36□□□□□ -1.23
FARP1-221ENST00000597596 USP17L18D6R9N7 530 aa7.36□□□□□ -1.23
FARP1-221ENST00000597596 USP17L22D6RA61 530 aa7.36□□□□□ -1.23
FARP1-221ENST00000597596 USP17L17D6RBQ6 530 aa7.36□□□□□ -1.23
FARP1-221ENST00000597596 USP17L19D6RCP7 530 aa7.36□□□□□ -1.23
FARP1-221ENST00000597596 USP17L20D6RJB6 530 aa7.36□□□□□ -1.23
FARP1-221ENST00000597596 H0YGN5 161 aa7.36□□□□□ -1.23
FARP1-221ENST00000597596 SGPL1O95470 568 aa7.36□□□□□ -1.23
FARP1-221ENST00000597596 GJA8P48165 433 aa7.36□□□□□ -1.23
FARP1-221ENST00000597596 USP17L24Q0WX57 530 aa7.36□□□□□ -1.23
FARP1-221ENST00000597596 SAMD1Q6SPF0 538 aaPredicted RBP7.36□□□□□ -1.23
FARP1-221ENST00000597596 CATSPERGQ6ZRH7 1159 aa7.36□□□□□ -1.23
FARP1-221ENST00000597596 PXYLP1Q8TE99 480 aa7.36□□□□□ -1.23
FARP1-221ENST00000597596 U2AF1L4Q8WU68 220 aaKnown RBP7.36□□□□□ -1.23
FARP1-221ENST00000597596 SHISA4Q96DD7 197 aa7.36□□□□□ -1.23
FARP1-221ENST00000597596 PUS7LQ9H0K6 701 aaKnown RBP7.36□□□□□ -1.23
FARP1-221ENST00000597596 EHD4Q9H223 541 aa7.36□□□□□ -1.23
FARP1-221ENST00000597596 SLC4A4Q9Y6R1 1079 aa7.36□□□□□ -1.23
FARP1-221ENST00000597596 COL2A1P02458 1487 aaPredicted RBP7.36□□□□□ -1.23
FARP1-221ENST00000597596 CNMDO75829 334 aa7.35□□□□□ -1.23
FARP1-221ENST00000597596 AKR1B1P15121 316 aa7.35□□□□□ -1.23
FARP1-221ENST00000597596 CDK8P49336 464 aa7.35□□□□□ -1.23
FARP1-221ENST00000597596 ERVK-9P63128 1117 aa7.35□□□□□ -1.23
FARP1-221ENST00000597596 ERVK-24P63145 666 aa7.35□□□□□ -1.23
FARP1-221ENST00000597596 ATP2B2Q01814 1243 aa7.35□□□□□ -1.23
FARP1-221ENST00000597596 GABPAQ06546 454 aa7.35□□□□□ -1.23
FARP1-221ENST00000597596 IRF5Q13568 498 aa7.35□□□□□ -1.23
FARP1-221ENST00000597596 KIAA1755Q5JYT7 1200 aa7.35□□□□□ -1.23
FARP1-221ENST00000597596 WDR78Q5VTH9 848 aa7.35□□□□□ -1.23
FARP1-221ENST00000597596 TMED8Q6PL24 325 aaPredicted RBP7.35□□□□□ -1.23
FARP1-221ENST00000597596 CLEC10AQ8IUN9 316 aa7.35□□□□□ -1.23
FARP1-221ENST00000597596 SIAH1Q8IUQ4 282 aa7.35□□□□□ -1.23
FARP1-221ENST00000597596 NKX2-3Q8TAU0 364 aa7.35□□□□□ -1.23
FARP1-221ENST00000597596 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.35□□□□□ -1.23
FARP1-221ENST00000597596 PORCNQ9H237 461 aa7.35□□□□□ -1.23
FARP1-221ENST00000597596 CWC22Q9HCG8 908 aaKnown RBP7.35□□□□□ -1.23
FARP1-221ENST00000597596 ECHDC1Q9NTX5 307 aa7.35□□□□□ -1.23
FARP1-221ENST00000597596 MORF4L1Q9UBU8 362 aa7.35□□□□□ -1.23
FARP1-221ENST00000597596 PHIPQ8WWQ0 1821 aa7.34□□□□□ -1.23
FARP1-221ENST00000597596 DOCK2Q92608 1830 aa7.34□□□□□ -1.23
FARP1-221ENST00000597596 LAMB1P07942 1786 aa7.34□□□□□ -1.23
FARP1-221ENST00000597596 MINDY4BA8MYZ0 360 aa7.34□□□□□ -1.23
FARP1-221ENST00000597596 SLC34A2O95436 690 aa7.34□□□□□ -1.23
FARP1-221ENST00000597596 USP14P54578 494 aa7.34□□□□□ -1.23
FARP1-221ENST00000597596 UBE3CQ15386 1083 aa7.34□□□□□ -1.23
FARP1-221ENST00000597596 CCL14Q16627 93 aa7.34□□□□□ -1.23
FARP1-221ENST00000597596 HABP4Q5JVS0 413 aaKnown RBP7.34□□□□□ -1.23
FARP1-221ENST00000597596 C12orf60Q5U649 245 aa7.34□□□□□ -1.23
FARP1-221ENST00000597596 ZSCAN25Q6NSZ9 544 aa7.34□□□□□ -1.23
FARP1-221ENST00000597596 CTR9Q6PD62 1173 aa7.34□□□□□ -1.23
FARP1-221ENST00000597596 PLEKHH3Q7Z736 793 aa7.34□□□□□ -1.23
FARP1-221ENST00000597596 SPICE1Q8N0Z3 855 aa7.34□□□□□ -1.23
FARP1-221ENST00000597596 OTUD7AQ8TE49 926 aaPredicted RBP7.34□□□□□ -1.23
FARP1-221ENST00000597596 OSBP2Q969R2 916 aa7.34□□□□□ -1.23
FARP1-221ENST00000597596 PAWRQ96IZ0 340 aaKnown RBP7.34□□□□□ -1.23
FARP1-221ENST00000597596 STRBPQ96SI9 672 aaKnown RBP7.34□□□□□ -1.23
FARP1-221ENST00000597596 NUDT12Q9BQG2 462 aa7.34□□□□□ -1.23
FARP1-221ENST00000597596 KIAA1683Q9H0B3 1180 aa7.34□□□□□ -1.23
FARP1-221ENST00000597596 RPAP3Q9H6T3 665 aaPredicted RBP7.34□□□□□ -1.23
FARP1-221ENST00000597596 HMX1Q9NP08 348 aaPredicted RBP7.34□□□□□ -1.23
FARP1-221ENST00000597596 ATP8A2Q9NTI2 1148 aa7.34□□□□□ -1.23
FARP1-221ENST00000597596 BTBD7Q9P203 1132 aa7.34□□□□□ -1.23
FARP1-221ENST00000597596 COLQQ9Y215 455 aaPredicted RBP7.34□□□□□ -1.23
FARP1-221ENST00000597596 BRCA2P51587 3418 aa7.34□□□□□ -1.23
FARP1-221ENST00000597596 CEP290O15078 2479 aa7.33□□□□□ -1.24
FARP1-221ENST00000597596 DOCK1Q14185 1865 aa7.33□□□□□ -1.24
FARP1-221ENST00000597596 GSG1L2A8MUP6 293 aa7.33□□□□□ -1.24
FARP1-221ENST00000597596 RNF113AO15541 343 aaKnown RBP7.33□□□□□ -1.24
FARP1-221ENST00000597596 RAD21O60216 631 aa7.33□□□□□ -1.24
FARP1-221ENST00000597596 FARP2O94887 1054 aaPredicted RBP7.33□□□□□ -1.24
FARP1-221ENST00000597596 APPP05067 770 aa7.33□□□□□ -1.24
FARP1-221ENST00000597596 VCAM1P19320 739 aa7.33□□□□□ -1.24
FARP1-221ENST00000597596 MAPK4P31152 587 aa7.33□□□□□ -1.24
FARP1-221ENST00000597596 CACNB2Q08289 660 aaPredicted RBP7.33□□□□□ -1.24
FARP1-221ENST00000597596 COG2Q14746 738 aa7.33□□□□□ -1.24
FARP1-221ENST00000597596 MORN1Q5T089 497 aa7.33□□□□□ -1.24
FARP1-221ENST00000597596 CENPQQ7L2Z9 268 aaPredicted RBP7.33□□□□□ -1.24
FARP1-221ENST00000597596 GPR142Q7Z601 462 aa7.33□□□□□ -1.24
FARP1-221ENST00000597596 DIS3LQ8TF46 1054 aaKnown RBP7.33□□□□□ -1.24
FARP1-221ENST00000597596 TRIB2Q92519 343 aa7.33□□□□□ -1.24
FARP1-221ENST00000597596 C12orf42Q96LP6 360 aa7.33□□□□□ -1.24
FARP1-221ENST00000597596 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.33□□□□□ -1.24
FARP1-221ENST00000597596 PAK6Q9NQU5 681 aaPredicted RBP7.33□□□□□ -1.24
FARP1-221ENST00000597596 HOXC10Q9NYD6 342 aa7.33□□□□□ -1.24
FARP1-221ENST00000597596 SWAP70Q9UH65 585 aa7.33□□□□□ -1.24
FARP1-221ENST00000597596 RABGAP1Q9Y3P9 1069 aa7.33□□□□□ -1.24
FARP1-221ENST00000597596 RPTORQ8N122 1335 aa7.32□□□□□ -1.24
FARP1-221ENST00000597596 SPDYE16A6NNV3 312 aaPredicted RBP7.32□□□□□ -1.24
FARP1-221ENST00000597596 HMGCRP04035 888 aa7.32□□□□□ -1.24
FARP1-221ENST00000597596 EEF2P13639 858 aaKnown RBP7.32□□□□□ -1.24
FARP1-221ENST00000597596 PRKAR2AP13861 404 aaKnown RBP7.32□□□□□ -1.24
FARP1-221ENST00000597596 CCND3P30281 292 aaPredicted RBP7.32□□□□□ -1.24
FARP1-221ENST00000597596 RGS2P41220 211 aa7.32□□□□□ -1.24
FARP1-221ENST00000597596 PLS1Q14651 629 aa7.32□□□□□ -1.24
FARP1-221ENST00000597596 ANKRD45Q5TZF3 282 aa7.32□□□□□ -1.24
FARP1-221ENST00000597596 CHRDL2Q6WN34 429 aa7.32□□□□□ -1.24
FARP1-221ENST00000597596 TMEM179Q6ZVK1 233 aa7.32□□□□□ -1.24
FARP1-221ENST00000597596 UBE2Q1Q7Z7E8 422 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms