RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 GAKO14976 1311 aa14.38□□□□□ -0.11
SHKBP1-213ENST00000597325 GNAT2P19087 354 aa14.37□□□□□ -0.11
SHKBP1-213ENST00000597325 BTDP43251 543 aa14.37□□□□□ -0.11
SHKBP1-213ENST00000597325 CRKP46108 304 aa14.37□□□□□ -0.11
SHKBP1-213ENST00000597325 HHIPL2Q6UWX4 724 aa14.37□□□□□ -0.11
SHKBP1-213ENST00000597325 ADGRA1Q86SQ6 560 aa14.37□□□□□ -0.11
SHKBP1-213ENST00000597325 MYLIPQ8WY64 445 aa14.37□□□□□ -0.11
SHKBP1-213ENST00000597325 ZKSCAN4Q969J2 545 aaPredicted RBP14.37□□□□□ -0.11
SHKBP1-213ENST00000597325 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.37□□□□□ -0.11
SHKBP1-213ENST00000597325 IL25Q9H293 177 aa14.37□□□□□ -0.11
SHKBP1-213ENST00000597325 ARMT1Q9H993 441 aa14.37□□□□□ -0.11
SHKBP1-213ENST00000597325 AATFQ9NY61 560 aaKnown RBP eCLIP14.37□□□□□ -0.11
SHKBP1-213ENST00000597325 SERPINA10Q9UK55 444 aa14.37□□□□□ -0.11
SHKBP1-213ENST00000597325 PFASO15067 1338 aa14.37□□□□□ -0.11
SHKBP1-213ENST00000597325 DOCK3Q8IZD9 2030 aa14.36□□□□□ -0.11
SHKBP1-213ENST00000597325 MCCP23508 829 aa14.36□□□□□ -0.11
SHKBP1-213ENST00000597325 MDM2Q00987 491 aaPredicted RBP14.36□□□□□ -0.11
SHKBP1-213ENST00000597325 LCORLQ8N3X6 602 aa14.36□□□□□ -0.11
SHKBP1-213ENST00000597325 FAM163AQ96GL9 167 aaPredicted RBP14.36□□□□□ -0.11
SHKBP1-213ENST00000597325 CRNKL1Q9BZJ0 848 aaKnown RBP14.36□□□□□ -0.11
SHKBP1-213ENST00000597325 C11orf49Q9H6J7 331 aa14.36□□□□□ -0.11
SHKBP1-213ENST00000597325 TDRD3Q9H7E2 651 aaKnown RBP14.36□□□□□ -0.11
SHKBP1-213ENST00000597325 DAGLAQ9Y4D2 1042 aa14.36□□□□□ -0.11
SHKBP1-213ENST00000597325 GPR75-ASB3A0A0A6YYF3 556 aa14.35□□□□□ -0.11
SHKBP1-213ENST00000597325 EPB41L2O43491 1005 aaKnown RBP14.35□□□□□ -0.11
SHKBP1-213ENST00000597325 SEC24BO95487 1268 aa14.35□□□□□ -0.11
SHKBP1-213ENST00000597325 APPP05067 770 aa14.35□□□□□ -0.11
SHKBP1-213ENST00000597325 DYNLL1P63167 89 aaKnown RBP14.35□□□□□ -0.11
SHKBP1-213ENST00000597325 PPATQ06203 517 aa14.35□□□□□ -0.11
SHKBP1-213ENST00000597325 DDRGK1Q96HY6 314 aa14.35□□□□□ -0.11
SHKBP1-213ENST00000597325 ZDHHC15Q96MV8 337 aa14.35□□□□□ -0.11
SHKBP1-213ENST00000597325 WRNIP1Q96S55 665 aa14.35□□□□□ -0.11
SHKBP1-213ENST00000597325 STRBPQ96SI9 672 aaKnown RBP14.35□□□□□ -0.11
SHKBP1-213ENST00000597325 RIOK1Q9BRS2 568 aaKnown RBP14.35□□□□□ -0.11
SHKBP1-213ENST00000597325 DSCC1Q9BVC3 393 aa14.35□□□□□ -0.11
SHKBP1-213ENST00000597325 MRIQ9BWK5 157 aa14.35□□□□□ -0.11
SHKBP1-213ENST00000597325 TTYH1Q9H313 450 aaPredicted RBP14.35□□□□□ -0.11
SHKBP1-213ENST00000597325 KCNH4Q9UQ05 1017 aa14.35□□□□□ -0.11
SHKBP1-213ENST00000597325 SLC4A4Q9Y6R1 1079 aa14.35□□□□□ -0.11
SHKBP1-213ENST00000597325 RPAP1Q9BWH6 1393 aaPredicted RBP14.34□□□□□ -0.11
SHKBP1-213ENST00000597325 TCP10L2B9ZVM9 353 aa14.34□□□□□ -0.11
SHKBP1-213ENST00000597325 NACAP1Q9BZK3 213 aa14.34□□□□□ -0.11
SHKBP1-213ENST00000597325 LSG1Q9H089 658 aaKnown RBP14.34□□□□□ -0.11
SHKBP1-213ENST00000597325 ARIH1Q9Y4X5 557 aaPredicted RBP14.34□□□□□ -0.11
SHKBP1-213ENST00000597325 U3KPZ7 1027 aaPredicted RBP14.34□□□□□ -0.11
SHKBP1-213ENST00000597325 CYP2C8P10632 490 aa14.33□□□□□ -0.12
SHKBP1-213ENST00000597325 HSPD1P10809 573 aaKnown RBP14.33□□□□□ -0.12
SHKBP1-213ENST00000597325 USP5P45974 858 aa14.33□□□□□ -0.12
SHKBP1-213ENST00000597325 PPP4CP60510 307 aa14.33□□□□□ -0.12
SHKBP1-213ENST00000597325 GPAT2Q6NUI2 795 aa14.33□□□□□ -0.12
SHKBP1-213ENST00000597325 TEX11Q8IYF3 940 aa14.33□□□□□ -0.12
SHKBP1-213ENST00000597325 USP38Q8NB14 1042 aa14.33□□□□□ -0.12
SHKBP1-213ENST00000597325 PARK7Q99497 189 aaKnown RBP14.33□□□□□ -0.12
SHKBP1-213ENST00000597325 TMOD2Q9NZR1 351 aa14.33□□□□□ -0.12
SHKBP1-213ENST00000597325 OGDHLQ9ULD0 1010 aa14.33□□□□□ -0.12
SHKBP1-213ENST00000597325 CHD9Q3L8U1 2897 aa14.33□□□□□ -0.12
SHKBP1-213ENST00000597325 NAV1Q8NEY1 1877 aa14.33□□□□□ -0.12
SHKBP1-213ENST00000597325 COL6A1P12109 1028 aa14.32□□□□□ -0.12
SHKBP1-213ENST00000597325 FOSL2P15408 326 aa14.32□□□□□ -0.12
SHKBP1-213ENST00000597325 TDO2P48775 406 aa14.32□□□□□ -0.12
SHKBP1-213ENST00000597325 PTH1RQ03431 593 aa14.32□□□□□ -0.12
SHKBP1-213ENST00000597325 VPS53Q5VIR6 699 aa14.32□□□□□ -0.12
SHKBP1-213ENST00000597325 SH3RF3Q8TEJ3 882 aaPredicted RBP14.32□□□□□ -0.12
SHKBP1-213ENST00000597325 USP26Q9BXU7 913 aa14.32□□□□□ -0.12
SHKBP1-213ENST00000597325 NAPBQ9H115 298 aa14.32□□□□□ -0.12
SHKBP1-213ENST00000597325 USP40Q9NVE5 1235 aa14.32□□□□□ -0.12
SHKBP1-213ENST00000597325 CTNNA3Q9UI47 895 aa14.32□□□□□ -0.12
SHKBP1-213ENST00000597325 RBM8AQ9Y5S9 174 aaKnown RBP14.32□□□□□ -0.12
SHKBP1-213ENST00000597325 PATL2C9JE40 543 aaKnown RBP14.31□□□□□ -0.12
SHKBP1-213ENST00000597325 TNNI2P48788 182 aa14.31□□□□□ -0.12
SHKBP1-213ENST00000597325 RNF20Q5VTR2 975 aa14.31□□□□□ -0.12
SHKBP1-213ENST00000597325 AMOTL1Q8IY63 956 aa14.31□□□□□ -0.12
SHKBP1-213ENST00000597325 SDR42E1Q8WUS8 393 aa14.31□□□□□ -0.12
SHKBP1-213ENST00000597325 MAP4K1Q92918 833 aa14.31□□□□□ -0.12
SHKBP1-213ENST00000597325 SNX27Q96L92 541 aa14.31□□□□□ -0.12
SHKBP1-213ENST00000597325 C22orf23Q9BZE7 217 aa14.31□□□□□ -0.12
SHKBP1-213ENST00000597325 ATP8A2Q9NTI2 1148 aa14.31□□□□□ -0.12
SHKBP1-213ENST00000597325 ZMYM6O95789 1325 aa14.31□□□□□ -0.12
SHKBP1-213ENST00000597325 FOCADQ5VW36 1801 aa14.3□□□□□ -0.12
SHKBP1-213ENST00000597325 TNPO2O14787 897 aaKnown RBP14.3□□□□□ -0.12
SHKBP1-213ENST00000597325 PRKAB2O43741 272 aa14.3□□□□□ -0.12
SHKBP1-213ENST00000597325 IMMTQ16891 758 aaKnown RBP14.3□□□□□ -0.12
SHKBP1-213ENST00000597325 LRRC26Q2I0M4 334 aa14.3□□□□□ -0.12
SHKBP1-213ENST00000597325 APOBEC3HQ6NTF7 200 aaKnown RBP14.3□□□□□ -0.12
SHKBP1-213ENST00000597325 CDC42EP5Q6NZY7 148 aa14.3□□□□□ -0.12
SHKBP1-213ENST00000597325 GIMAP6Q6P9H5 292 aa14.3□□□□□ -0.12
SHKBP1-213ENST00000597325 LAMA4Q16363 1823 aa14.29□□□□□ -0.12
SHKBP1-213ENST00000597325 GSG1L2A8MUP6 293 aa14.29□□□□□ -0.12
SHKBP1-213ENST00000597325 ZKSCAN1P17029 563 aaPredicted RBP14.29□□□□□ -0.12
SHKBP1-213ENST00000597325 INPP5BP32019 993 aa14.29□□□□□ -0.12
SHKBP1-213ENST00000597325 RHBDL3P58872 404 aa14.29□□□□□ -0.12
SHKBP1-213ENST00000597325 PICALMQ13492 652 aa14.29□□□□□ -0.12
SHKBP1-213ENST00000597325 ALX1Q15699 326 aa14.29□□□□□ -0.12
SHKBP1-213ENST00000597325 IFNL3Q8IZI9 196 aa14.29□□□□□ -0.12
SHKBP1-213ENST00000597325 TGFBRAP1Q8WUH2 860 aa14.29□□□□□ -0.12
SHKBP1-213ENST00000597325 EPB41L4AQ9HCS5 686 aaPredicted RBP14.29□□□□□ -0.12
SHKBP1-213ENST00000597325 ARPP21Q9UBL0 812 aaPredicted RBP14.29□□□□□ -0.12
SHKBP1-213ENST00000597325 FLT1P17948 1338 aa14.29□□□□□ -0.12
SHKBP1-213ENST00000597325 WDFY4Q6ZS81 3184 aa14.29□□□□□ -0.12
SHKBP1-213ENST00000597325 CDK5RAP2Q96SN8 1893 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms