RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 RABGAP1Q9Y3P9 1069 aa19.14■□□□□ 0.65
LIG1-214ENST00000597146 HOXC6P09630 235 aa19.13■□□□□ 0.65
LIG1-214ENST00000597146 ADCYAP1R1P41586 468 aa19.13■□□□□ 0.65
LIG1-214ENST00000597146 CCNA1P78396 465 aa19.13■□□□□ 0.65
LIG1-214ENST00000597146 MAP3K12Q12852 859 aa19.13■□□□□ 0.65
LIG1-214ENST00000597146 ARRDC4Q8NCT1 418 aa19.13■□□□□ 0.65
LIG1-214ENST00000597146 PTPRCP08575 1304 aa19.13■□□□□ 0.65
LIG1-214ENST00000597146 MYH1P12882 1939 aa19.13■□□□□ 0.65
LIG1-214ENST00000597146 SMCHD1A6NHR9 2005 aa19.12■□□□□ 0.65
LIG1-214ENST00000597146 GBF1Q92538 1859 aa19.12■□□□□ 0.65
LIG1-214ENST00000597146 MAP4K4O95819 1239 aaPredicted RBP19.12■□□□□ 0.65
LIG1-214ENST00000597146 IGHA2P01877 340 aa19.12■□□□□ 0.65
LIG1-214ENST00000597146 GSTO1P78417 241 aa19.12■□□□□ 0.65
LIG1-214ENST00000597146 USP17L2Q6R6M4 530 aa19.12■□□□□ 0.65
LIG1-214ENST00000597146 XAGE2Q96GT9 111 aa19.12■□□□□ 0.65
LIG1-214ENST00000597146 ZNF576Q9H609 170 aa19.12■□□□□ 0.65
LIG1-214ENST00000597146 RAI14Q9P0K7 980 aa19.12■□□□□ 0.65
LIG1-214ENST00000597146 HMG20BQ9P0W2 317 aa19.12■□□□□ 0.65
LIG1-214ENST00000597146 BTBD7Q9P203 1132 aa19.12■□□□□ 0.65
LIG1-214ENST00000597146 IVNS1ABPQ9Y6Y0 642 aa19.12■□□□□ 0.65
LIG1-214ENST00000597146 A0A0G2JMZ2 1700 aa19.11■□□□□ 0.65
LIG1-214ENST00000597146 A0A1B0GUL7 405 aa19.11■□□□□ 0.65
LIG1-214ENST00000597146 LDHCP07864 332 aa19.11■□□□□ 0.65
LIG1-214ENST00000597146 HOXD11P31277 338 aaPredicted RBP19.11■□□□□ 0.65
LIG1-214ENST00000597146 TLE2Q04725 743 aa19.11■□□□□ 0.65
LIG1-214ENST00000597146 MAPKAPK5Q8IW41 473 aa19.11■□□□□ 0.65
LIG1-214ENST00000597146 THEGQ9P2T0 379 aa19.11■□□□□ 0.65
LIG1-214ENST00000597146 CRACR2BQ8N4Y2 399 aaPredicted RBP19.1■□□□□ 0.65
LIG1-214ENST00000597146 ATXN2LQ8WWM7 1075 aaKnown RBP19.1■□□□□ 0.65
LIG1-214ENST00000597146 ASB2Q96Q27 587 aa19.1■□□□□ 0.65
LIG1-214ENST00000597146 UHRF1Q96T88 793 aaPredicted RBP19.1■□□□□ 0.65
LIG1-214ENST00000597146 FEZ1Q99689 392 aa19.1■□□□□ 0.65
LIG1-214ENST00000597146 TRIM34Q9BYJ4 488 aa19.1■□□□□ 0.65
LIG1-214ENST00000597146 FLT1P17948 1338 aa19.09■□□□□ 0.65
LIG1-214ENST00000597146 USP17L15C9J2P7 530 aa19.09■□□□□ 0.65
LIG1-214ENST00000597146 USP17L13C9JLJ4 530 aa19.09■□□□□ 0.65
LIG1-214ENST00000597146 USP17L11C9JVI0 530 aa19.09■□□□□ 0.65
LIG1-214ENST00000597146 USP17L18D6R9N7 530 aa19.09■□□□□ 0.65
LIG1-214ENST00000597146 USP17L22D6RA61 530 aa19.09■□□□□ 0.65
LIG1-214ENST00000597146 USP17L17D6RBQ6 530 aa19.09■□□□□ 0.65
LIG1-214ENST00000597146 USP17L19D6RCP7 530 aa19.09■□□□□ 0.65
LIG1-214ENST00000597146 USP17L20D6RJB6 530 aa19.09■□□□□ 0.65
LIG1-214ENST00000597146 CLTBP09497 229 aa19.09■□□□□ 0.65
LIG1-214ENST00000597146 USP17L24Q0WX57 530 aa19.09■□□□□ 0.65
LIG1-214ENST00000597146 LRRC41Q15345 812 aa19.09■□□□□ 0.65
LIG1-214ENST00000597146 FAM47AQ5JRC9 791 aa19.09■□□□□ 0.65
LIG1-214ENST00000597146 SPATA5Q8NB90 893 aa19.09■□□□□ 0.65
LIG1-214ENST00000597146 TIFAQ96CG3 184 aa19.09■□□□□ 0.65
LIG1-214ENST00000597146 DHX36Q9H2U1 1008 aaKnown RBP19.09■□□□□ 0.65
LIG1-214ENST00000597146 AATFQ9NY61 560 aaKnown RBP eCLIP19.09■□□□□ 0.65
LIG1-214ENST00000597146 PALD1Q9ULE6 856 aa19.09■□□□□ 0.65
LIG1-214ENST00000597146 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.09■□□□□ 0.65
LIG1-214ENST00000597146 CHD7Q9P2D1 2997 aa19.09■□□□□ 0.65
LIG1-214ENST00000597146 XIRP2A4UGR9 3374 aa19.09■□□□□ 0.65
LIG1-214ENST00000597146 ZNFX1Q9P2E3 1918 aaKnown RBP19.08■□□□□ 0.65
LIG1-214ENST00000597146 SEPT4O43236 478 aa19.08■□□□□ 0.64
LIG1-214ENST00000597146 UBTFL1P0CB47 393 aaPredicted RBP19.08■□□□□ 0.64
LIG1-214ENST00000597146 MVPQ14764 893 aaKnown RBP19.08■□□□□ 0.64
LIG1-214ENST00000597146 C1orf53Q5VUE5 145 aa19.08■□□□□ 0.64
LIG1-214ENST00000597146 METTL16Q86W50 562 aaKnown RBP19.08■□□□□ 0.64
LIG1-214ENST00000597146 TGFBRAP1Q8WUH2 860 aa19.08■□□□□ 0.64
LIG1-214ENST00000597146 C12orf42Q96LP6 360 aa19.08■□□□□ 0.64
LIG1-214ENST00000597146 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.07■□□□□ 0.64
LIG1-214ENST00000597146 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.07■□□□□ 0.64
LIG1-214ENST00000597146 GH2P01242 217 aa19.07■□□□□ 0.64
LIG1-214ENST00000597146 VCAM1P19320 739 aa19.07■□□□□ 0.64
LIG1-214ENST00000597146 ADORA2AP29274 412 aa19.07■□□□□ 0.64
LIG1-214ENST00000597146 FPGSQ05932 587 aa19.07■□□□□ 0.64
LIG1-214ENST00000597146 TFCP2Q12800 502 aa19.07■□□□□ 0.64
LIG1-214ENST00000597146 PRAMEF19Q5SWL8 479 aa19.07■□□□□ 0.64
LIG1-214ENST00000597146 CATSPERGQ6ZRH7 1159 aa19.07■□□□□ 0.64
LIG1-214ENST00000597146 GAS2L1Q99501 681 aaPredicted RBP19.07■□□□□ 0.64
LIG1-214ENST00000597146 PRDM12Q9H4Q4 367 aa19.07■□□□□ 0.64
LIG1-214ENST00000597146 GINM1Q9NU53 330 aa19.07■□□□□ 0.64
LIG1-214ENST00000597146 SAP30BPQ9UHR5 308 aaKnown RBP19.07■□□□□ 0.64
LIG1-214ENST00000597146 TACC3Q9Y6A5 838 aa19.07■□□□□ 0.64
LIG1-214ENST00000597146 SPDYE16A6NNV3 312 aaPredicted RBP19.06■□□□□ 0.64
LIG1-214ENST00000597146 PQBP1O60828 265 aaKnown RBP19.06■□□□□ 0.64
LIG1-214ENST00000597146 RAG1P15918 1043 aa19.06■□□□□ 0.64
LIG1-214ENST00000597146 CCDC85BQ15834 202 aaPredicted RBP19.06■□□□□ 0.64
LIG1-214ENST00000597146 OLFML2BQ68BL8 750 aa19.06■□□□□ 0.64
LIG1-214ENST00000597146 DPP9Q86TI2 863 aa19.06■□□□□ 0.64
LIG1-214ENST00000597146 NECAB3Q96P71 396 aaPredicted RBP19.06■□□□□ 0.64
LIG1-214ENST00000597146 NOL10Q9BSC4 688 aaKnown RBP19.06■□□□□ 0.64
LIG1-214ENST00000597146 COPRSQ9NQ92 184 aa19.06■□□□□ 0.64
LIG1-214ENST00000597146 KIAA0355O15063 1070 aa19.05■□□□□ 0.64
LIG1-214ENST00000597146 PBX2P40425 430 aa19.05■□□□□ 0.64
LIG1-214ENST00000597146 LBX2Q6XYB7 198 aa19.05■□□□□ 0.64
LIG1-214ENST00000597146 ADGRA1Q86SQ6 560 aa19.05■□□□□ 0.64
LIG1-214ENST00000597146 FOXP4Q8IVH2 680 aaPredicted RBP19.05■□□□□ 0.64
LIG1-214ENST00000597146 SSH1Q8WYL5 1049 aa19.05■□□□□ 0.64
LIG1-214ENST00000597146 PHF24Q9UPV7 400 aa19.05■□□□□ 0.64
LIG1-214ENST00000597146 GRXCR1A8MXD5 290 aa19.04■□□□□ 0.64
LIG1-214ENST00000597146 COBLO75128 1261 aa19.04■□□□□ 0.64
LIG1-214ENST00000597146 MRPS5P82675 430 aaKnown RBP19.04■□□□□ 0.64
LIG1-214ENST00000597146 ADGRE1Q14246 886 aa19.04■□□□□ 0.64
LIG1-214ENST00000597146 AKNAD1Q5T1N1 836 aa19.04■□□□□ 0.64
LIG1-214ENST00000597146 NEUROD6Q96NK8 337 aa19.04■□□□□ 0.64
LIG1-214ENST00000597146 LRP2BPQ9P2M1 347 aa19.04■□□□□ 0.64
LIG1-214ENST00000597146 PARP14Q460N5 1801 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 1337.3 ms