RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 LRRCC1Q9C099 1032 aa21.63■■□□□ 1.05
HOMER3-208ENST00000595756 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.63■■□□□ 1.05
HOMER3-208ENST00000595756 BOLA2Q9H3K6 86 aa21.63■■□□□ 1.05
HOMER3-208ENST00000595756 DCP1AQ9NPI6 582 aaPredicted RBP21.63■■□□□ 1.05
HOMER3-208ENST00000595756 MCM9Q9NXL9 1143 aa21.63■■□□□ 1.05
HOMER3-208ENST00000595756 A0A0G2JMZ2 1700 aa21.63■■□□□ 1.05
HOMER3-208ENST00000595756 MAPK4P31152 587 aa21.62■■□□□ 1.05
HOMER3-208ENST00000595756 SDR42E1Q8WUS8 393 aa21.62■■□□□ 1.05
HOMER3-208ENST00000595756 CRBNQ96SW2 442 aa21.62■■□□□ 1.05
HOMER3-208ENST00000595756 RBPJLQ9UBG7 517 aa21.62■■□□□ 1.05
HOMER3-208ENST00000595756 USP17L15C9J2P7 530 aa21.61■■□□□ 1.05
HOMER3-208ENST00000595756 USP17L13C9JLJ4 530 aa21.61■■□□□ 1.05
HOMER3-208ENST00000595756 USP17L11C9JVI0 530 aa21.61■■□□□ 1.05
HOMER3-208ENST00000595756 USP17L18D6R9N7 530 aa21.61■■□□□ 1.05
HOMER3-208ENST00000595756 USP17L22D6RA61 530 aa21.61■■□□□ 1.05
HOMER3-208ENST00000595756 USP17L17D6RBQ6 530 aa21.61■■□□□ 1.05
HOMER3-208ENST00000595756 USP17L19D6RCP7 530 aa21.61■■□□□ 1.05
HOMER3-208ENST00000595756 USP17L20D6RJB6 530 aa21.61■■□□□ 1.05
HOMER3-208ENST00000595756 CENPBP07199 599 aaPredicted RBP21.61■■□□□ 1.05
HOMER3-208ENST00000595756 VCAM1P19320 739 aa21.61■■□□□ 1.05
HOMER3-208ENST00000595756 USP17L24Q0WX57 530 aa21.61■■□□□ 1.05
HOMER3-208ENST00000595756 ZYXQ15942 572 aaKnown RBP21.61■■□□□ 1.05
HOMER3-208ENST00000595756 DEFB118Q96PH6 123 aa21.61■■□□□ 1.05
HOMER3-208ENST00000595756 CRISPLD2Q9H0B8 497 aa21.61■■□□□ 1.05
HOMER3-208ENST00000595756 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.61■■□□□ 1.05
HOMER3-208ENST00000595756 MBD4O95243 580 aa21.6■■□□□ 1.05
HOMER3-208ENST00000595756 GUCY1A2P33402 732 aa21.6■■□□□ 1.05
HOMER3-208ENST00000595756 NUDT12Q9BQG2 462 aa21.6■■□□□ 1.05
HOMER3-208ENST00000595756 BCL11AQ9H165 835 aa21.6■■□□□ 1.05
HOMER3-208ENST00000595756 ARMT1Q9H993 441 aa21.6■■□□□ 1.05
HOMER3-208ENST00000595756 ATP8A2Q9NTI2 1148 aa21.6■■□□□ 1.05
HOMER3-208ENST00000595756 SWAP70Q9UH65 585 aa21.6■■□□□ 1.05
HOMER3-208ENST00000595756 ALPK3Q96L96 1907 aa21.59■■□□□ 1.05
HOMER3-208ENST00000595756 H0YGN5 161 aa21.59■■□□□ 1.05
HOMER3-208ENST00000595756 PEX10O60683 326 aa21.59■■□□□ 1.05
HOMER3-208ENST00000595756 XRCC5P13010 732 aaKnown RBP21.59■■□□□ 1.05
HOMER3-208ENST00000595756 UBE3CQ15386 1083 aa21.59■■□□□ 1.05
HOMER3-208ENST00000595756 LBX2Q6XYB7 198 aa21.59■■□□□ 1.05
HOMER3-208ENST00000595756 CATSPERGQ6ZRH7 1159 aa21.59■■□□□ 1.05
HOMER3-208ENST00000595756 ACER1Q8TDN7 264 aa21.59■■□□□ 1.05
HOMER3-208ENST00000595756 TRIB2Q92519 343 aa21.59■■□□□ 1.05
HOMER3-208ENST00000595756 PAGR1Q9BTK6 254 aa21.59■■□□□ 1.05
HOMER3-208ENST00000595756 RABGAP1Q9Y3P9 1069 aa21.59■■□□□ 1.05
HOMER3-208ENST00000595756 ZNF236Q9UL36 1845 aa21.59■■□□□ 1.05
HOMER3-208ENST00000595756 RPTORQ8N122 1335 aa21.58■■□□□ 1.05
HOMER3-208ENST00000595756 EVX2Q03828 476 aa21.58■■□□□ 1.05
HOMER3-208ENST00000595756 SEPT2Q15019 361 aa21.58■■□□□ 1.05
HOMER3-208ENST00000595756 POTEEQ6S8J3 1075 aa21.58■■□□□ 1.05
HOMER3-208ENST00000595756 GPR142Q7Z601 462 aa21.58■■□□□ 1.05
HOMER3-208ENST00000595756 TRMT44Q8IYL2 757 aaKnown RBP21.58■■□□□ 1.05
HOMER3-208ENST00000595756 DPF3Q92784 378 aa21.58■■□□□ 1.05
HOMER3-208ENST00000595756 PORCNQ9H237 461 aa21.58■■□□□ 1.05
HOMER3-208ENST00000595756 PCDH10Q9P2E7 1040 aa21.58■■□□□ 1.05
HOMER3-208ENST00000595756 RLFQ13129 1914 aa21.58■■□□□ 1.04
HOMER3-208ENST00000595756 PARP14Q460N5 1801 aa21.57■■□□□ 1.04
HOMER3-208ENST00000595756 FRMPD3Q5JV73 1810 aa21.57■■□□□ 1.04
HOMER3-208ENST00000595756 CNMDO75829 334 aa21.57■■□□□ 1.04
HOMER3-208ENST00000595756 TFRCP02786 760 aaKnown RBP21.57■■□□□ 1.04
HOMER3-208ENST00000595756 Q3C1V9 767 aa21.57■■□□□ 1.04
HOMER3-208ENST00000595756 MAP3K21Q5TCX8 1036 aa21.57■■□□□ 1.04
HOMER3-208ENST00000595756 ZSCAN25Q6NSZ9 544 aa21.57■■□□□ 1.04
HOMER3-208ENST00000595756 TMEM179Q6ZVK1 233 aa21.57■■□□□ 1.04
HOMER3-208ENST00000595756 ANKLE1Q8NAG6 615 aa21.57■■□□□ 1.04
HOMER3-208ENST00000595756 USP6NLQ92738 828 aa21.57■■□□□ 1.04
HOMER3-208ENST00000595756 HMX1Q9NP08 348 aaPredicted RBP21.57■■□□□ 1.04
HOMER3-208ENST00000595756 MPHOSPH10O00566 681 aaKnown RBP21.56■■□□□ 1.04
HOMER3-208ENST00000595756 CYP2D6P10635 497 aa21.56■■□□□ 1.04
HOMER3-208ENST00000595756 CYP2B6P20813 491 aa21.56■■□□□ 1.04
HOMER3-208ENST00000595756 RGS2P41220 211 aa21.56■■□□□ 1.04
HOMER3-208ENST00000595756 CCNA1P78396 465 aa21.56■■□□□ 1.04
HOMER3-208ENST00000595756 MORN1Q5T089 497 aa21.56■■□□□ 1.04
HOMER3-208ENST00000595756 PLEKHH3Q7Z736 793 aa21.56■■□□□ 1.04
HOMER3-208ENST00000595756 CCAR1Q8IX12 1150 aaKnown RBP21.56■■□□□ 1.04
HOMER3-208ENST00000595756 APBA2Q99767 749 aa21.56■■□□□ 1.04
HOMER3-208ENST00000595756 RPAP3Q9H6T3 665 aaPredicted RBP21.56■■□□□ 1.04
HOMER3-208ENST00000595756 GREB1LQ9C091 1923 aaPredicted RBP21.55■■□□□ 1.04
HOMER3-208ENST00000595756 SPDYE16A6NNV3 312 aaPredicted RBP21.55■■□□□ 1.04
HOMER3-208ENST00000595756 PRKAB2O43741 272 aa21.55■■□□□ 1.04
HOMER3-208ENST00000595756 SMARCA5O60264 1052 aaPredicted RBP21.55■■□□□ 1.04
HOMER3-208ENST00000595756 ZKSCAN1P17029 563 aaPredicted RBP21.55■■□□□ 1.04
HOMER3-208ENST00000595756 TRIM32Q13049 653 aa21.55■■□□□ 1.04
HOMER3-208ENST00000595756 SLFNL1Q499Z3 407 aa21.55■■□□□ 1.04
HOMER3-208ENST00000595756 AMOTL1Q8IY63 956 aa21.55■■□□□ 1.04
HOMER3-208ENST00000595756 SLC44A5Q8NCS7 719 aa21.55■■□□□ 1.04
HOMER3-208ENST00000595756 ECHDC1Q9NTX5 307 aa21.55■■□□□ 1.04
HOMER3-208ENST00000595756 COLQQ9Y215 455 aaPredicted RBP21.55■■□□□ 1.04
HOMER3-208ENST00000595756 A0A1W2PRG0 241 aa21.54■■□□□ 1.04
HOMER3-208ENST00000595756 PRKAR2AP13861 404 aaKnown RBP21.54■■□□□ 1.04
HOMER3-208ENST00000595756 DDRGK1Q96HY6 314 aa21.54■■□□□ 1.04
HOMER3-208ENST00000595756 GPATCH3Q96I76 525 aa21.54■■□□□ 1.04
HOMER3-208ENST00000595756 DCTPP1Q9H773 170 aa21.54■■□□□ 1.04
HOMER3-208ENST00000595756 TRIOBPQ9H2D6 2365 aa21.54■■□□□ 1.04
HOMER3-208ENST00000595756 GLRX3O76003 335 aaKnown RBP21.53■■□□□ 1.04
HOMER3-208ENST00000595756 CHGBP05060 677 aa21.53■■□□□ 1.04
HOMER3-208ENST00000595756 C12orf60Q5U649 245 aa21.53■■□□□ 1.04
HOMER3-208ENST00000595756 DYNLL2Q96FJ2 89 aa21.53■■□□□ 1.04
HOMER3-208ENST00000595756 CWC22Q9HCG8 908 aaKnown RBP21.53■■□□□ 1.04
HOMER3-208ENST00000595756 NR2E3Q9Y5X4 410 aa21.53■■□□□ 1.04
HOMER3-208ENST00000595756 SZT2Q5T011 3432 aa21.52■■□□□ 1.04
HOMER3-208ENST00000595756 C16orf86Q6ZW13 317 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms