RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 BMP2KLQ5H9B9 411 aa16.41■□□□□ 0.22
SHKBP1-207ENST00000595631 COL13A1Q5TAT6 717 aaPredicted RBP16.41■□□□□ 0.22
SHKBP1-207ENST00000595631 TMEM179Q6ZVK1 233 aa16.41■□□□□ 0.22
SHKBP1-207ENST00000595631 FASTKD5Q7L8L6 764 aaKnown RBP16.41■□□□□ 0.22
SHKBP1-207ENST00000595631 CCDC17Q96LX7 622 aa16.41■□□□□ 0.22
SHKBP1-207ENST00000595631 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.41■□□□□ 0.22
SHKBP1-207ENST00000595631 CFHR5Q9BXR6 569 aa16.41■□□□□ 0.22
SHKBP1-207ENST00000595631 NBPF3Q9H094 633 aa16.41■□□□□ 0.22
SHKBP1-207ENST00000595631 TAOK2Q9UL54 1235 aa16.41■□□□□ 0.22
SHKBP1-207ENST00000595631 ZMYM6O95789 1325 aa16.41■□□□□ 0.22
SHKBP1-207ENST00000595631 RLFQ13129 1914 aa16.41■□□□□ 0.22
SHKBP1-207ENST00000595631 A0A1W2PRG0 241 aa16.4■□□□□ 0.22
SHKBP1-207ENST00000595631 GPR25O00155 361 aa16.4■□□□□ 0.22
SHKBP1-207ENST00000595631 CYP2C8P10632 490 aa16.4■□□□□ 0.22
SHKBP1-207ENST00000595631 SH3D19Q5HYK7 790 aa16.4■□□□□ 0.22
SHKBP1-207ENST00000595631 FAM47AQ5JRC9 791 aa16.4■□□□□ 0.22
SHKBP1-207ENST00000595631 SIAH1Q8IUQ4 282 aa16.4■□□□□ 0.22
SHKBP1-207ENST00000595631 FEZ1Q99689 392 aa16.4■□□□□ 0.22
SHKBP1-207ENST00000595631 PRDM10Q9NQV6 1147 aa16.4■□□□□ 0.22
SHKBP1-207ENST00000595631 EMILIN3Q9NT22 766 aa16.4■□□□□ 0.22
SHKBP1-207ENST00000595631 ANAPC4Q9UJX5 808 aa16.4■□□□□ 0.22
SHKBP1-207ENST00000595631 AGTPBP1Q9UPW5 1226 aa16.4■□□□□ 0.22
SHKBP1-207ENST00000595631 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.4■□□□□ 0.22
SHKBP1-207ENST00000595631 RAD50Q92878 1312 aa16.4■□□□□ 0.22
SHKBP1-207ENST00000595631 SGSM2O43147 1006 aa16.39■□□□□ 0.21
SHKBP1-207ENST00000595631 SLC3A2P08195 630 aaKnown RBP16.39■□□□□ 0.21
SHKBP1-207ENST00000595631 PTH1RQ03431 593 aa16.39■□□□□ 0.21
SHKBP1-207ENST00000595631 ICA1Q05084 483 aa16.39■□□□□ 0.21
SHKBP1-207ENST00000595631 PDE4BQ07343 736 aa16.39■□□□□ 0.21
SHKBP1-207ENST00000595631 TBC1D10CQ8IV04 446 aa16.39■□□□□ 0.21
SHKBP1-207ENST00000595631 PROCA1Q8NCQ7 364 aaPredicted RBP16.39■□□□□ 0.21
SHKBP1-207ENST00000595631 NKX2-3Q8TAU0 364 aa16.39■□□□□ 0.21
SHKBP1-207ENST00000595631 ZNF296Q8WUU4 475 aaPredicted RBP16.39■□□□□ 0.21
SHKBP1-207ENST00000595631 RUFY2Q8WXA3 655 aa16.39■□□□□ 0.21
SHKBP1-207ENST00000595631 DSCC1Q9BVC3 393 aa16.39■□□□□ 0.21
SHKBP1-207ENST00000595631 ZFYVE28Q9HCC9 887 aa16.39■□□□□ 0.21
SHKBP1-207ENST00000595631 ZCCHC17Q9NP64 241 aaKnown RBP16.39■□□□□ 0.21
SHKBP1-207ENST00000595631 COL11A1P12107 1806 aaPredicted RBP16.39■□□□□ 0.21
SHKBP1-207ENST00000595631 ADGRA2Q96PE1 1338 aa16.39■□□□□ 0.21
SHKBP1-207ENST00000595631 C19orf81C9J6K1 198 aa16.38■□□□□ 0.21
SHKBP1-207ENST00000595631 EEF2P13639 858 aaKnown RBP16.38■□□□□ 0.21
SHKBP1-207ENST00000595631 ATP2B2Q01814 1243 aa16.38■□□□□ 0.21
SHKBP1-207ENST00000595631 KIAA1755Q5JYT7 1200 aa16.38■□□□□ 0.21
SHKBP1-207ENST00000595631 USP17L2Q6R6M4 530 aa16.38■□□□□ 0.21
SHKBP1-207ENST00000595631 ZNF444Q8N0Y2 327 aaPredicted RBP16.38■□□□□ 0.21
SHKBP1-207ENST00000595631 TMOD4Q9NZQ9 345 aa16.38■□□□□ 0.21
SHKBP1-207ENST00000595631 CPA4Q9UI42 421 aa16.38■□□□□ 0.21
SHKBP1-207ENST00000595631 CAP1Q01518 475 aa16.37■□□□□ 0.21
SHKBP1-207ENST00000595631 RRP12Q5JTH9 1297 aaKnown RBP16.37■□□□□ 0.21
SHKBP1-207ENST00000595631 KIAA1683Q9H0B3 1180 aa16.37■□□□□ 0.21
SHKBP1-207ENST00000595631 IGKV6D-41A0A0C4DH26 115 aa16.36■□□□□ 0.21
SHKBP1-207ENST00000595631 TLR2O60603 784 aa16.36■□□□□ 0.21
SHKBP1-207ENST00000595631 FKTNO75072 461 aa16.36■□□□□ 0.21
SHKBP1-207ENST00000595631 ECM2O94769 699 aaPredicted RBP16.36■□□□□ 0.21
SHKBP1-207ENST00000595631 TFAP4Q01664 338 aa16.36■□□□□ 0.21
SHKBP1-207ENST00000595631 CEP95Q96GE4 821 aa16.36■□□□□ 0.21
SHKBP1-207ENST00000595631 PARK7Q99497 189 aaKnown RBP16.36■□□□□ 0.21
SHKBP1-207ENST00000595631 ESYT1Q9BSJ8 1104 aa16.36■□□□□ 0.21
SHKBP1-207ENST00000595631 KANSL2Q9H9L4 492 aa16.36■□□□□ 0.21
SHKBP1-207ENST00000595631 ZNF287Q9HBT7 754 aa16.36■□□□□ 0.21
SHKBP1-207ENST00000595631 ARHGEF10LQ9HCE6 1279 aa16.36■□□□□ 0.21
SHKBP1-207ENST00000595631 TOMM22Q9NS69 142 aa16.36■□□□□ 0.21
SHKBP1-207ENST00000595631 SLC45A1Q9Y2W3 748 aa16.36■□□□□ 0.21
SHKBP1-207ENST00000595631 NEDD4P46934 1319 aa16.36■□□□□ 0.21
SHKBP1-207ENST00000595631 PLIN4Q96Q06 1357 aa16.36■□□□□ 0.21
SHKBP1-207ENST00000595631 A0A0G2JMZ2 1700 aa16.36■□□□□ 0.21
SHKBP1-207ENST00000595631 DOCK3Q8IZD9 2030 aa16.35■□□□□ 0.21
SHKBP1-207ENST00000595631 ZNF213O14771 459 aa16.35■□□□□ 0.21
SHKBP1-207ENST00000595631 RANBP6O60518 1105 aaKnown RBP16.35■□□□□ 0.21
SHKBP1-207ENST00000595631 NMT2O60551 498 aa16.35■□□□□ 0.21
SHKBP1-207ENST00000595631 FGRP09769 529 aa16.35■□□□□ 0.21
SHKBP1-207ENST00000595631 TSPY3P0CV98 308 aa16.35■□□□□ 0.21
SHKBP1-207ENST00000595631 TSPY8P0CW00 308 aa16.35■□□□□ 0.21
SHKBP1-207ENST00000595631 VCAM1P19320 739 aa16.35■□□□□ 0.21
SHKBP1-207ENST00000595631 NOM1Q5C9Z4 860 aaKnown RBP16.35■□□□□ 0.21
SHKBP1-207ENST00000595631 NEDD1Q8NHV4 660 aa16.35■□□□□ 0.21
SHKBP1-207ENST00000595631 CD99L2Q8TCZ2 262 aa16.35■□□□□ 0.21
SHKBP1-207ENST00000595631 C12orf42Q96LP6 360 aa16.35■□□□□ 0.21
SHKBP1-207ENST00000595631 ASCC2Q9H1I8 757 aaPredicted RBP16.35■□□□□ 0.21
SHKBP1-207ENST00000595631 ORC4O43929 436 aa16.34■□□□□ 0.21
SHKBP1-207ENST00000595631 PEX10O60683 326 aa16.34■□□□□ 0.21
SHKBP1-207ENST00000595631 CDC45O75419 566 aa16.34■□□□□ 0.21
SHKBP1-207ENST00000595631 USP14P54578 494 aa16.34■□□□□ 0.21
SHKBP1-207ENST00000595631 AKNAD1Q5T1N1 836 aa16.34■□□□□ 0.21
SHKBP1-207ENST00000595631 C17orf99Q6UX52 265 aa16.34■□□□□ 0.21
SHKBP1-207ENST00000595631 SPICE1Q8N0Z3 855 aa16.34■□□□□ 0.21
SHKBP1-207ENST00000595631 TMX2Q9Y320 296 aa16.34■□□□□ 0.21
SHKBP1-207ENST00000595631 TAF6LQ9Y6J9 622 aa16.34■□□□□ 0.21
SHKBP1-207ENST00000595631 TSPY2A6NKD2 308 aa16.33■□□□□ 0.2
SHKBP1-207ENST00000595631 OSBPP22059 807 aa16.33■□□□□ 0.2
SHKBP1-207ENST00000595631 HOXA7P31268 230 aaPredicted RBP16.33■□□□□ 0.2
SHKBP1-207ENST00000595631 SP3Q02447 781 aa16.33■□□□□ 0.2
SHKBP1-207ENST00000595631 PABPC4Q13310 644 aaKnown RBP eCLIP16.33■□□□□ 0.2
SHKBP1-207ENST00000595631 IMMTQ16891 758 aaKnown RBP16.33■□□□□ 0.2
SHKBP1-207ENST00000595631 MFSD6Q6ZSS7 791 aa16.33■□□□□ 0.2
SHKBP1-207ENST00000595631 LRRC47Q8N1G4 583 aaKnown RBP16.33■□□□□ 0.2
SHKBP1-207ENST00000595631 SMCR8Q8TEV9 937 aaPredicted RBP16.33■□□□□ 0.2
SHKBP1-207ENST00000595631 STAG1Q8WVM7 1258 aa16.33■□□□□ 0.2
SHKBP1-207ENST00000595631 P2RX7Q99572 595 aaKnown RBP16.33■□□□□ 0.2
SHKBP1-207ENST00000595631 ARHGAP39Q9C0H5 1083 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms