RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 ITPR1Q14643 2758 aa4.05□□□□□ -1.76
VRK3-204ENST00000593912 TENM4Q6N022 2769 aa4.05□□□□□ -1.76
VRK3-204ENST00000593912 TEP1Q99973 2627 aaKnown RBP4.05□□□□□ -1.76
VRK3-204ENST00000593912 DCDC2BA2VCK2 349 aa4.05□□□□□ -1.76
VRK3-204ENST00000593912 DCDC2CA8MYV0 355 aa4.05□□□□□ -1.76
VRK3-204ENST00000593912 U2SURPO15042 1029 aaKnown RBP4.05□□□□□ -1.76
VRK3-204ENST00000593912 ATP2A2P16615 1042 aaKnown RBP4.05□□□□□ -1.76
VRK3-204ENST00000593912 GCLCP48506 637 aaPredicted RBP4.05□□□□□ -1.76
VRK3-204ENST00000593912 TCP10Q12799 353 aa4.05□□□□□ -1.76
VRK3-204ENST00000593912 MAP2K5Q13163 448 aa4.05□□□□□ -1.76
VRK3-204ENST00000593912 TAF7Q15545 349 aaPredicted RBP4.05□□□□□ -1.76
VRK3-204ENST00000593912 CLUL1Q15846 466 aa4.05□□□□□ -1.76
VRK3-204ENST00000593912 Q3C1V9 767 aa4.05□□□□□ -1.76
VRK3-204ENST00000593912 CCDC152Q4G0S7 254 aa4.05□□□□□ -1.76
VRK3-204ENST00000593912 PRAMEF19Q5SWL8 479 aa4.05□□□□□ -1.76
VRK3-204ENST00000593912 TMEM199Q8N511 208 aa4.05□□□□□ -1.76
VRK3-204ENST00000593912 DCLK2Q8N568 766 aa4.05□□□□□ -1.76
VRK3-204ENST00000593912 NPLOC4Q8TAT6 608 aa4.05□□□□□ -1.76
VRK3-204ENST00000593912 NEK9Q8TD19 979 aa4.05□□□□□ -1.76
VRK3-204ENST00000593912 KCNG4Q8TDN1 519 aa4.05□□□□□ -1.76
VRK3-204ENST00000593912 ASIC4Q96FT7 647 aa4.05□□□□□ -1.76
VRK3-204ENST00000593912 POLR3GLQ9BT43 218 aa4.05□□□□□ -1.76
VRK3-204ENST00000593912 MORF4L1Q9UBU8 362 aa4.05□□□□□ -1.76
VRK3-204ENST00000593912 PRKAG3Q9UGI9 489 aa4.05□□□□□ -1.76
VRK3-204ENST00000593912 SERPINA10Q9UK55 444 aa4.05□□□□□ -1.76
VRK3-204ENST00000593912 PNMA3Q9UL41 463 aa4.05□□□□□ -1.76
VRK3-204ENST00000593912 MTUS1Q9ULD2 1270 aa4.05□□□□□ -1.76
VRK3-204ENST00000593912 PHF24Q9UPV7 400 aa4.05□□□□□ -1.76
VRK3-204ENST00000593912 SLC4A7Q9Y6M7 1214 aa4.05□□□□□ -1.76
VRK3-204ENST00000593912 MYH3P11055 1940 aa4.05□□□□□ -1.76
VRK3-204ENST00000593912 RFX7Q2KHR2 1363 aa4.04□□□□□ -1.76
VRK3-204ENST00000593912 SCN5AQ14524 2016 aa4.04□□□□□ -1.76
VRK3-204ENST00000593912 ATG2AQ2TAZ0 1938 aa4.04□□□□□ -1.76
VRK3-204ENST00000593912 DLG5Q8TDM6 1919 aa4.04□□□□□ -1.76
VRK3-204ENST00000593912 LCHNA4D1U4 455 aa4.04□□□□□ -1.76
VRK3-204ENST00000593912 RBAK-RBAKDNI3L0D1 243 aa4.04□□□□□ -1.76
VRK3-204ENST00000593912 DIAPH1O60610 1272 aaKnown RBP4.04□□□□□ -1.76
VRK3-204ENST00000593912 PGK1P00558 417 aa4.04□□□□□ -1.76
VRK3-204ENST00000593912 ARP10275 920 aa4.04□□□□□ -1.76
VRK3-204ENST00000593912 ATXN1P54253 815 aaKnown RBP4.04□□□□□ -1.76
VRK3-204ENST00000593912 FKBP1AP62942 108 aaKnown RBP4.04□□□□□ -1.76
VRK3-204ENST00000593912 DMWDQ09019 674 aa4.04□□□□□ -1.76
VRK3-204ENST00000593912 MFSD14BQ5SR56 506 aa4.04□□□□□ -1.76
VRK3-204ENST00000593912 MCTP2Q6DN12 878 aa4.04□□□□□ -1.76
VRK3-204ENST00000593912 ANKRD33Q7Z3H0 272 aa4.04□□□□□ -1.76
VRK3-204ENST00000593912 PLEKHH3Q7Z736 793 aa4.04□□□□□ -1.76
VRK3-204ENST00000593912 FAM83AQ86UY5 434 aa4.04□□□□□ -1.76
VRK3-204ENST00000593912 SCYL3Q8IZE3 742 aa4.04□□□□□ -1.76
VRK3-204ENST00000593912 TMEM105Q8N8V8 129 aa4.04□□□□□ -1.76
VRK3-204ENST00000593912 RTF1Q92541 710 aaKnown RBP4.04□□□□□ -1.76
VRK3-204ENST00000593912 LENG1Q96BZ8 264 aaPredicted RBP4.04□□□□□ -1.76
VRK3-204ENST00000593912 VWCEQ96DN2 955 aa4.04□□□□□ -1.76
VRK3-204ENST00000593912 HOOK2Q96ED9 719 aa4.04□□□□□ -1.76
VRK3-204ENST00000593912 EDC3Q96F86 508 aaKnown RBP4.04□□□□□ -1.76
VRK3-204ENST00000593912 HNRNPABQ99729 332 aaKnown RBP4.04□□□□□ -1.76
VRK3-204ENST00000593912 HINFPQ9BQA5 517 aa4.04□□□□□ -1.76
VRK3-204ENST00000593912 PAGR1Q9BTK6 254 aa4.04□□□□□ -1.76
VRK3-204ENST00000593912 MTIF3Q9H2K0 278 aaKnown RBP4.04□□□□□ -1.76
VRK3-204ENST00000593912 DBF4Q9UBU7 674 aaPredicted RBP4.04□□□□□ -1.76
VRK3-204ENST00000593912 LEMD3Q9Y2U8 911 aa4.04□□□□□ -1.76
VRK3-204ENST00000593912 SIP14410 1827 aa4.04□□□□□ -1.76
VRK3-204ENST00000593912 ATAD5Q96QE3 1844 aa4.04□□□□□ -1.76
VRK3-204ENST00000593912 CEP295Q9C0D2 2601 aa4.04□□□□□ -1.76
VRK3-204ENST00000593912 OTOGLQ3ZCN5 2332 aa4.04□□□□□ -1.76
VRK3-204ENST00000593912 PHF20L1A8MW92 1017 aa4.03□□□□□ -1.76
VRK3-204ENST00000593912 SEPT4O43236 478 aa4.03□□□□□ -1.76
VRK3-204ENST00000593912 PDE8AO60658 829 aa4.03□□□□□ -1.76
VRK3-204ENST00000593912 TAF5LO75529 589 aa4.03□□□□□ -1.76
VRK3-204ENST00000593912 IL1R1P14778 569 aa4.03□□□□□ -1.76
VRK3-204ENST00000593912 MAPK4P31152 587 aa4.03□□□□□ -1.76
VRK3-204ENST00000593912 PRKAR2BP31323 418 aa4.03□□□□□ -1.76
VRK3-204ENST00000593912 KCNJ4P48050 445 aa4.03□□□□□ -1.76
VRK3-204ENST00000593912 HMGCS2P54868 508 aa4.03□□□□□ -1.76
VRK3-204ENST00000593912 CCL23P55773 120 aa4.03□□□□□ -1.76
VRK3-204ENST00000593912 ERVK-9P63128 1117 aa4.03□□□□□ -1.76
VRK3-204ENST00000593912 ERVK-24P63145 666 aa4.03□□□□□ -1.76
VRK3-204ENST00000593912 ATP2B2Q01814 1243 aa4.03□□□□□ -1.76
VRK3-204ENST00000593912 SIGLEC14Q08ET2 396 aa4.03□□□□□ -1.76
VRK3-204ENST00000593912 MKRN4PQ13434 485 aaPredicted RBP4.03□□□□□ -1.76
VRK3-204ENST00000593912 TTLL4Q14679 1199 aa4.03□□□□□ -1.76
VRK3-204ENST00000593912 PUS10Q3MIT2 529 aaKnown RBP4.03□□□□□ -1.76
VRK3-204ENST00000593912 NCBP3Q53F19 620 aaKnown RBP4.03□□□□□ -1.76
VRK3-204ENST00000593912 CDCA8Q53HL2 280 aa4.03□□□□□ -1.76
VRK3-204ENST00000593912 WDR78Q5VTH9 848 aa4.03□□□□□ -1.76
VRK3-204ENST00000593912 KIAA0319Q5VV43 1072 aa4.03□□□□□ -1.76
VRK3-204ENST00000593912 TOX2Q96NM4 488 aa4.03□□□□□ -1.76
VRK3-204ENST00000593912 CDC5LQ99459 802 aaKnown RBP4.03□□□□□ -1.76
VRK3-204ENST00000593912 GREM2Q9H772 168 aa4.03□□□□□ -1.76
VRK3-204ENST00000593912 CWC22Q9HCG8 908 aaKnown RBP4.03□□□□□ -1.76
VRK3-204ENST00000593912 PICK1Q9NRD5 415 aa4.03□□□□□ -1.76
VRK3-204ENST00000593912 STXBP3O00186 592 aa4.02□□□□□ -1.77
VRK3-204ENST00000593912 PITPNM1O00562 1244 aa4.02□□□□□ -1.77
VRK3-204ENST00000593912 SLC4A2P04920 1241 aa4.02□□□□□ -1.77
VRK3-204ENST00000593912 HERVK_113P62684 666 aa4.02□□□□□ -1.77
VRK3-204ENST00000593912 IRX5P78411 483 aaPredicted RBP4.02□□□□□ -1.77
VRK3-204ENST00000593912 NFIAQ12857 509 aa4.02□□□□□ -1.77
VRK3-204ENST00000593912 SMAD2Q15796 467 aaKnown RBP4.02□□□□□ -1.77
VRK3-204ENST00000593912 LRSAM1Q6UWE0 723 aa4.02□□□□□ -1.77
VRK3-204ENST00000593912 PRR23BQ6ZRT6 265 aa4.02□□□□□ -1.77
VRK3-204ENST00000593912 TMCO2Q7Z6W1 182 aaPredicted RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms