RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 TRMT44Q8IYL2 757 aaKnown RBP16.05■□□□□ 0.16
APOC1-209ENST00000592885 HAUS7Q99871 368 aa16.05■□□□□ 0.16
APOC1-209ENST00000592885 NUDT12Q9BQG2 462 aa16.05■□□□□ 0.16
APOC1-209ENST00000592885 LRRCC1Q9C099 1032 aa16.05■□□□□ 0.16
APOC1-209ENST00000592885 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.05■□□□□ 0.162e-7■■■■□ 19.8
APOC1-209ENST00000592885 MCM9Q9NXL9 1143 aa16.05■□□□□ 0.16
APOC1-209ENST00000592885 SWAP70Q9UH65 585 aa16.05■□□□□ 0.16
APOC1-209ENST00000592885 XRCC5P13010 732 aaKnown RBP16.04■□□□□ 0.16
APOC1-209ENST00000592885 LBX2Q6XYB7 198 aa16.04■□□□□ 0.16
APOC1-209ENST00000592885 LCORLQ8N3X6 602 aa16.04■□□□□ 0.16
APOC1-209ENST00000592885 ANKLE1Q8NAG6 615 aa16.04■□□□□ 0.16
APOC1-209ENST00000592885 CRISPLD2Q9H0B8 497 aa16.04■□□□□ 0.16
APOC1-209ENST00000592885 TXNRD2Q9NNW7 524 aa16.04■□□□□ 0.16
APOC1-209ENST00000592885 DCP1AQ9NPI6 582 aaPredicted RBP16.04■□□□□ 0.16
APOC1-209ENST00000592885 ATP8A2Q9NTI2 1148 aa16.04■□□□□ 0.16
APOC1-209ENST00000592885 RBPJLQ9UBG7 517 aa16.04■□□□□ 0.16
APOC1-209ENST00000592885 RABGAP1Q9Y3P9 1069 aa16.04■□□□□ 0.16
APOC1-209ENST00000592885 A0A0G2JMZ2 1700 aa16.03■□□□□ 0.16
APOC1-209ENST00000592885 RPTORQ8N122 1335 aa16.03■□□□□ 0.16
APOC1-209ENST00000592885 VCAM1P19320 739 aa16.03■□□□□ 0.16
APOC1-209ENST00000592885 CCNA1P78396 465 aa16.03■□□□□ 0.16
APOC1-209ENST00000592885 UBE3CQ15386 1083 aa16.03■□□□□ 0.16
APOC1-209ENST00000592885 ZSCAN25Q6NSZ9 544 aa16.03■□□□□ 0.16
APOC1-209ENST00000592885 DEFB118Q96PH6 123 aa16.03■□□□□ 0.16
APOC1-209ENST00000592885 BOLA2Q9H3K6 86 aa16.03■□□□□ 0.16
APOC1-209ENST00000592885 BAZ2AQ9UIF9 1905 aaKnown RBP16.02■□□□□ 0.16
APOC1-209ENST00000592885 H0YGN5 161 aa16.02■□□□□ 0.16
APOC1-209ENST00000592885 TFRCP02786 760 aaKnown RBP16.02■□□□□ 0.16
APOC1-209ENST00000592885 ZYXQ15942 572 aaKnown RBP16.02■□□□□ 0.16
APOC1-209ENST00000592885 CATSPERGQ6ZRH7 1159 aa16.02■□□□□ 0.16
APOC1-209ENST00000592885 TMEM179Q6ZVK1 233 aa16.02■□□□□ 0.16
APOC1-209ENST00000592885 CCAR1Q8IX12 1150 aaKnown RBP16.02■□□□□ 0.16
APOC1-209ENST00000592885 AMOTL1Q8IY63 956 aa16.02■□□□□ 0.16
APOC1-209ENST00000592885 SDR42E1Q8WUS8 393 aa16.02■□□□□ 0.16
APOC1-209ENST00000592885 DPF3Q92784 378 aa16.02■□□□□ 0.16
APOC1-209ENST00000592885 EDC3Q96F86 508 aaKnown RBP16.02■□□□□ 0.16
APOC1-209ENST00000592885 PAGR1Q9BTK6 254 aa16.02■□□□□ 0.16
APOC1-209ENST00000592885 HMX1Q9NP08 348 aaPredicted RBP16.02■□□□□ 0.16
APOC1-209ENST00000592885 ZNF236Q9UL36 1845 aa16.02■□□□□ 0.16
APOC1-209ENST00000592885 GLRX3O76003 335 aaKnown RBP16.01■□□□□ 0.15
APOC1-209ENST00000592885 MBD4O95243 580 aa16.01■□□□□ 0.15
APOC1-209ENST00000592885 GUCY1A2P33402 732 aa16.01■□□□□ 0.15
APOC1-209ENST00000592885 RGS2P41220 211 aa16.01■□□□□ 0.15
APOC1-209ENST00000592885 MAP3K21Q5TCX8 1036 aa16.01■□□□□ 0.15
APOC1-209ENST00000592885 C20orf194Q5TEA3 1177 aa16.01■□□□□ 0.15
APOC1-209ENST00000592885 GPR142Q7Z601 462 aa16.01■□□□□ 0.15
APOC1-209ENST00000592885 PLEKHH3Q7Z736 793 aa16.01■□□□□ 0.15
APOC1-209ENST00000592885 ACER1Q8TDN7 264 aa16.01■□□□□ 0.15
APOC1-209ENST00000592885 TRIB2Q92519 343 aa16.01■□□□□ 0.15
APOC1-209ENST00000592885 USP6NLQ92738 828 aa16.01■□□□□ 0.15
APOC1-209ENST00000592885 DDRGK1Q96HY6 314 aa16.01■□□□□ 0.15
APOC1-209ENST00000592885 APBA2Q99767 749 aa16.01■□□□□ 0.15
APOC1-209ENST00000592885 ARMT1Q9H993 441 aa16.01■□□□□ 0.15
APOC1-209ENST00000592885 NR2E3Q9Y5X4 410 aa16.01■□□□□ 0.15
APOC1-209ENST00000592885 ZKSCAN1P17029 563 aaPredicted RBP16■□□□□ 0.15
APOC1-209ENST00000592885 SEPT2Q15019 361 aa16■□□□□ 0.15
APOC1-209ENST00000592885 MORN1Q5T089 497 aa16■□□□□ 0.15
APOC1-209ENST00000592885 GPATCH3Q96I76 525 aa16■□□□□ 0.15
APOC1-209ENST00000592885 PORCNQ9H237 461 aa16■□□□□ 0.15
APOC1-209ENST00000592885 SH2D4AQ9H788 454 aa16■□□□□ 0.15
APOC1-209ENST00000592885 CWC22Q9HCG8 908 aaKnown RBP16■□□□□ 0.15
APOC1-209ENST00000592885 CEP290O15078 2479 aa16■□□□□ 0.15
APOC1-209ENST00000592885 MPHOSPH10O00566 681 aaKnown RBP15.99■□□□□ 0.15
APOC1-209ENST00000592885 CNMDO75829 334 aa15.99■□□□□ 0.15
APOC1-209ENST00000592885 CYP2B6P20813 491 aa15.99■□□□□ 0.15
APOC1-209ENST00000592885 Q3C1V9 767 aa15.99■□□□□ 0.15
APOC1-209ENST00000592885 POTEEQ6S8J3 1075 aa15.99■□□□□ 0.15
APOC1-209ENST00000592885 LPAR1Q92633 364 aa15.99■□□□□ 0.15
APOC1-209ENST00000592885 CCDC17Q96LX7 622 aa15.99■□□□□ 0.15
APOC1-209ENST00000592885 RPAP3Q9H6T3 665 aaPredicted RBP15.99■□□□□ 0.15
APOC1-209ENST00000592885 ECHDC1Q9NTX5 307 aa15.99■□□□□ 0.15
APOC1-209ENST00000592885 COLQQ9Y215 455 aaPredicted RBP15.99■□□□□ 0.15
APOC1-209ENST00000592885 RLFQ13129 1914 aa15.98■□□□□ 0.15
APOC1-209ENST00000592885 ALPK3Q96L96 1907 aa15.98■□□□□ 0.15
APOC1-209ENST00000592885 SPDYE16A6NNV3 312 aaPredicted RBP15.98■□□□□ 0.15
APOC1-209ENST00000592885 PRKAR2AP13861 404 aaKnown RBP15.98■□□□□ 0.15
APOC1-209ENST00000592885 MAP2K5Q13163 448 aa15.98■□□□□ 0.15
APOC1-209ENST00000592885 C12orf60Q5U649 245 aa15.98■□□□□ 0.15
APOC1-209ENST00000592885 NECAB2Q7Z6G3 386 aa15.98■□□□□ 0.15
APOC1-209ENST00000592885 BCL11AQ9H165 835 aa15.98■□□□□ 0.15
APOC1-209ENST00000592885 DCTPP1Q9H773 170 aa15.98■□□□□ 0.15
APOC1-209ENST00000592885 ARHGEF10LQ9HCE6 1279 aa15.98■□□□□ 0.15
APOC1-209ENST00000592885 ARPP21Q9UBL0 812 aaPredicted RBP15.98■□□□□ 0.15
APOC1-209ENST00000592885 PARP14Q460N5 1801 aa15.98■□□□□ 0.15
APOC1-209ENST00000592885 FRMPD3Q5JV73 1810 aa15.98■□□□□ 0.15
APOC1-209ENST00000592885 SLC15A5A6NIM6 579 aa15.97■□□□□ 0.15
APOC1-209ENST00000592885 PRKAB2O43741 272 aa15.97■□□□□ 0.15
APOC1-209ENST00000592885 PEX10O60683 326 aa15.97■□□□□ 0.15
APOC1-209ENST00000592885 CYP2D6P10635 497 aa15.97■□□□□ 0.15
APOC1-209ENST00000592885 EVX2Q03828 476 aa15.97■□□□□ 0.15
APOC1-209ENST00000592885 TRIM32Q13049 653 aa15.97■□□□□ 0.15
APOC1-209ENST00000592885 C16orf86Q6ZW13 317 aa15.97■□□□□ 0.15
APOC1-209ENST00000592885 MB21D1Q8N884 522 aa15.97■□□□□ 0.15
APOC1-209ENST00000592885 HOXC10Q9NYD6 342 aa15.97■□□□□ 0.15
APOC1-209ENST00000592885 OGDHLQ9ULD0 1010 aa15.97■□□□□ 0.15
APOC1-209ENST00000592885 GREB1LQ9C091 1923 aaPredicted RBP15.97■□□□□ 0.15
APOC1-209ENST00000592885 A0A1W2PRG0 241 aa15.96■□□□□ 0.15
APOC1-209ENST00000592885 SMARCA5O60264 1052 aaPredicted RBP15.96■□□□□ 0.15
APOC1-209ENST00000592885 EVI5O60447 810 aa15.96■□□□□ 0.15
APOC1-209ENST00000592885 HOXC6P09630 235 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms