RNA–Protein interactions for RNA: ENST00000592642.1

TRIM65-206, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 396 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-206ENST00000592642 RTN1Q16799 776 aa11.87□□□□□ -0.51
TRIM65-206ENST00000592642 CERKLQ49MI3 558 aaPredicted RBP11.87□□□□□ -0.51
TRIM65-206ENST00000592642 SYNE3Q6ZMZ3 975 aa11.87□□□□□ -0.51
TRIM65-206ENST00000592642 CATIPQ7Z7H3 387 aa11.87□□□□□ -0.51
TRIM65-206ENST00000592642 CLEC10AQ8IUN9 316 aa11.87□□□□□ -0.51
TRIM65-206ENST00000592642 CHMP4CQ96CF2 233 aa11.87□□□□□ -0.51
TRIM65-206ENST00000592642 TMEM47Q9BQJ4 181 aa11.87□□□□□ -0.51
TRIM65-206ENST00000592642 TRIM34Q9BYJ4 488 aa11.87□□□□□ -0.51
TRIM65-206ENST00000592642 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.87□□□□□ -0.51
TRIM65-206ENST00000592642 PPP2R3BQ9Y5P8 575 aa11.87□□□□□ -0.51
TRIM65-206ENST00000592642 PHF20L1A8MW92 1017 aa11.86□□□□□ -0.51
TRIM65-206ENST00000592642 DHX16O60231 1041 aaKnown RBP11.86□□□□□ -0.51
TRIM65-206ENST00000592642 GDF11O95390 407 aa11.86□□□□□ -0.51
TRIM65-206ENST00000592642 TOP1P11387 765 aaKnown RBP11.86□□□□□ -0.51
TRIM65-206ENST00000592642 FDPSP14324 419 aaKnown RBP11.86□□□□□ -0.51
TRIM65-206ENST00000592642 EPHX2P34913 555 aa11.86□□□□□ -0.51
TRIM65-206ENST00000592642 HMGN5P82970 282 aaKnown RBP11.86□□□□□ -0.51
TRIM65-206ENST00000592642 FUT2Q10981 343 aa11.86□□□□□ -0.51
TRIM65-206ENST00000592642 PKP1Q13835 747 aa11.86□□□□□ -0.51
TRIM65-206ENST00000592642 NBPF12Q5TAG4 269 aaPredicted RBP11.86□□□□□ -0.51
TRIM65-206ENST00000592642 TMEM179Q6ZVK1 233 aa11.86□□□□□ -0.51
TRIM65-206ENST00000592642 USP50Q70EL3 339 aaPredicted RBP11.86□□□□□ -0.51
TRIM65-206ENST00000592642 CCDC144CPQ8IYA2 1237 aa11.86□□□□□ -0.51
TRIM65-206ENST00000592642 FANCBQ8NB91 859 aa11.86□□□□□ -0.51
TRIM65-206ENST00000592642 PNMA1Q8ND90 353 aa11.86□□□□□ -0.51
TRIM65-206ENST00000592642 MAP3K14Q99558 947 aa11.86□□□□□ -0.51
TRIM65-206ENST00000592642 TAF1DQ9H5J8 278 aaPredicted RBP11.86□□□□□ -0.51
TRIM65-206ENST00000592642 KAT14Q9H8E8 782 aa11.86□□□□□ -0.51
TRIM65-206ENST00000592642 STX8Q9UNK0 236 aa11.86□□□□□ -0.51
TRIM65-206ENST00000592642 ZDHHC9Q9Y397 364 aa11.86□□□□□ -0.51
TRIM65-206ENST00000592642 BAZ2AQ9UIF9 1905 aaKnown RBP11.86□□□□□ -0.51
TRIM65-206ENST00000592642 BRD1O95696 1058 aa11.85□□□□□ -0.51
TRIM65-206ENST00000592642 TTLL1O95922 423 aa11.85□□□□□ -0.51
TRIM65-206ENST00000592642 GH2P01242 217 aa11.85□□□□□ -0.51
TRIM65-206ENST00000592642 CALM1P0DP23 149 aa11.85□□□□□ -0.51
TRIM65-206ENST00000592642 CALM2P0DP24 149 aa11.85□□□□□ -0.51
TRIM65-206ENST00000592642 CALM3P0DP25 149 aa11.85□□□□□ -0.51
TRIM65-206ENST00000592642 IFNAR1P17181 557 aa11.85□□□□□ -0.51
TRIM65-206ENST00000592642 GRM4Q14833 912 aa11.85□□□□□ -0.51
TRIM65-206ENST00000592642 SEPT2Q15019 361 aa11.85□□□□□ -0.51
TRIM65-206ENST00000592642 RAB3GAP1Q15042 981 aa11.85□□□□□ -0.51
TRIM65-206ENST00000592642 PPP2R5BQ15173 497 aa11.85□□□□□ -0.51
TRIM65-206ENST00000592642 ABCB5Q2M3G0 1257 aa11.85□□□□□ -0.51
TRIM65-206ENST00000592642 PPP4R3BQ5MIZ7 849 aa11.85□□□□□ -0.51
TRIM65-206ENST00000592642 TMTC3Q6ZXV5 915 aa11.85□□□□□ -0.51
TRIM65-206ENST00000592642 MIGA2Q7L4E1 593 aa11.85□□□□□ -0.51
TRIM65-206ENST00000592642 SIAH1Q8IUQ4 282 aa11.85□□□□□ -0.51
TRIM65-206ENST00000592642 NUP133Q8WUM0 1156 aa11.85□□□□□ -0.51
TRIM65-206ENST00000592642 NYAP2Q9P242 653 aa11.85□□□□□ -0.51
TRIM65-206ENST00000592642 FOCADQ5VW36 1801 aa11.85□□□□□ -0.51
TRIM65-206ENST00000592642 SSC5DA1L4H1 1573 aa11.84□□□□□ -0.51
TRIM65-206ENST00000592642 SIPA1L1O43166 1804 aa11.84□□□□□ -0.51
TRIM65-206ENST00000592642 CCDC196A0A1B0GTZ2 297 aa11.84□□□□□ -0.51
TRIM65-206ENST00000592642 IQCA1LA6NCM1 817 aa11.84□□□□□ -0.51
TRIM65-206ENST00000592642 MPHOSPH10O00566 681 aaKnown RBP11.84□□□□□ -0.51
TRIM65-206ENST00000592642 CPLX1O14810 134 aa11.84□□□□□ -0.51
TRIM65-206ENST00000592642 PLEKHA8P1O95397 391 aa11.84□□□□□ -0.51
TRIM65-206ENST00000592642 SNHG28P0DPA3 235 aa11.84□□□□□ -0.51
TRIM65-206ENST00000592642 SYT1P21579 422 aa11.84□□□□□ -0.51
TRIM65-206ENST00000592642 CAP2P40123 477 aa11.84□□□□□ -0.51
TRIM65-206ENST00000592642 NUCB2P80303 420 aa11.84□□□□□ -0.51
TRIM65-206ENST00000592642 NBPF11Q86T75 865 aa11.84□□□□□ -0.51
TRIM65-206ENST00000592642 ZC3H15Q8WU90 426 aaKnown RBP11.84□□□□□ -0.51
TRIM65-206ENST00000592642 MKL1Q969V6 931 aa11.84□□□□□ -0.51
TRIM65-206ENST00000592642 DDX11Q96FC9 970 aa11.84□□□□□ -0.51
TRIM65-206ENST00000592642 KANSL2Q9H9L4 492 aa11.84□□□□□ -0.51
TRIM65-206ENST00000592642 RBM28Q9NW13 759 aaKnown RBP11.84□□□□□ -0.51
TRIM65-206ENST00000592642 ZNF112Q9UJU3 913 aa11.84□□□□□ -0.51
TRIM65-206ENST00000592642 ZBTB21Q9ULJ3 1066 aa11.84□□□□□ -0.51
TRIM65-206ENST00000592642 STK36Q9NRP7 1315 aa11.84□□□□□ -0.51
TRIM65-206ENST00000592642 SBF1O95248 1867 aa11.83□□□□□ -0.52
TRIM65-206ENST00000592642 CDK5RAP2Q96SN8 1893 aa11.83□□□□□ -0.52
TRIM65-206ENST00000592642 PPFIA3O75145 1194 aa11.83□□□□□ -0.52
TRIM65-206ENST00000592642 CDKL5O76039 1030 aa11.83□□□□□ -0.52
TRIM65-206ENST00000592642 EEF2P13639 858 aaKnown RBP11.83□□□□□ -0.52
TRIM65-206ENST00000592642 ICA1Q05084 483 aa11.83□□□□□ -0.52
TRIM65-206ENST00000592642 SLC35G1Q2M3R5 365 aa11.83□□□□□ -0.52
TRIM65-206ENST00000592642 PRAMEF18Q5VWM3 479 aa11.83□□□□□ -0.52
TRIM65-206ENST00000592642 CPLX2Q6PUV4 134 aaKnown RBP11.83□□□□□ -0.52
TRIM65-206ENST00000592642 RASGRP2Q7LDG7 609 aa11.83□□□□□ -0.52
TRIM65-206ENST00000592642 LRRC47Q8N1G4 583 aaKnown RBP11.83□□□□□ -0.52
TRIM65-206ENST00000592642 PHKBQ93100 1093 aa11.83□□□□□ -0.52
TRIM65-206ENST00000592642 CABP5Q9NP86 173 aa11.83□□□□□ -0.52
TRIM65-206ENST00000592642 ORC3Q9UBD5 711 aaPredicted RBP11.83□□□□□ -0.52
TRIM65-206ENST00000592642 CLIP2Q9UDT6 1046 aa11.83□□□□□ -0.52
TRIM65-206ENST00000592642 MAD2L2Q9UI95 211 aa11.83□□□□□ -0.52
TRIM65-206ENST00000592642 MTMR6Q9Y217 621 aa11.83□□□□□ -0.52
TRIM65-206ENST00000592642 DICER1Q9UPY3 1922 aaKnown RBP11.83□□□□□ -0.52
TRIM65-206ENST00000592642 PALM3A6NDB9 673 aaPredicted RBP11.82□□□□□ -0.52
TRIM65-206ENST00000592642 ADM5C9JUS6 153 aa11.82□□□□□ -0.52
TRIM65-206ENST00000592642 STX6O43752 255 aa11.82□□□□□ -0.52
TRIM65-206ENST00000592642 FMNL1O95466 1100 aaPredicted RBP11.82□□□□□ -0.52
TRIM65-206ENST00000592642 PDHBP11177 359 aa11.82□□□□□ -0.52
TRIM65-206ENST00000592642 PDCP20941 246 aa11.82□□□□□ -0.52
TRIM65-206ENST00000592642 KIF5BP33176 963 aa11.82□□□□□ -0.52
TRIM65-206ENST00000592642 DCAF15Q66K64 600 aa11.82□□□□□ -0.52
TRIM65-206ENST00000592642 SRBD1Q8N5C6 995 aaKnown RBP11.82□□□□□ -0.52
TRIM65-206ENST00000592642 CTCFLQ8NI51 663 aaPredicted RBP11.82□□□□□ -0.52
TRIM65-206ENST00000592642 DCPSQ96C86 337 aaKnown RBP11.82□□□□□ -0.52
TRIM65-206ENST00000592642 HOOK2Q96ED9 719 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms