RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 MYH6P13533 1939 aa16.9■□□□□ 0.3
SMARCA4-219ENST00000592604 CEP112Q8N8E3 955 aa16.9■□□□□ 0.3
SMARCA4-219ENST00000592604 FANCBQ8NB91 859 aa16.9■□□□□ 0.3
SMARCA4-219ENST00000592604 ARMT1Q9H993 441 aa16.9■□□□□ 0.3
SMARCA4-219ENST00000592604 PSD3Q9NYI0 1048 aa16.9■□□□□ 0.3
SMARCA4-219ENST00000592604 MSL3Q8N5Y2 521 aaKnown RBP16.89■□□□□ 0.29
SMARCA4-219ENST00000592604 CABP5Q9NP86 173 aa16.89■□□□□ 0.29
SMARCA4-219ENST00000592604 RAB21Q9UL25 225 aa16.89■□□□□ 0.29
SMARCA4-219ENST00000592604 POTEB2H3BUK9 544 aa16.89■□□□□ 0.29
SMARCA4-219ENST00000592604 KIF5CO60282 957 aa16.89■□□□□ 0.29
SMARCA4-219ENST00000592604 PDE8AO60658 829 aa16.89■□□□□ 0.29
SMARCA4-219ENST00000592604 CD44P16070 742 aaKnown RBP16.89■□□□□ 0.29
SMARCA4-219ENST00000592604 GNAT2P19087 354 aa16.89■□□□□ 0.29
SMARCA4-219ENST00000592604 GPTP24298 496 aa16.89■□□□□ 0.29
SMARCA4-219ENST00000592604 USP5P45974 858 aa16.89■□□□□ 0.29
SMARCA4-219ENST00000592604 MSANTD4Q8NCY6 345 aa16.89■□□□□ 0.29
SMARCA4-219ENST00000592604 NEK11Q8NG66 645 aa16.89■□□□□ 0.29
SMARCA4-219ENST00000592604 CCDC51Q96ER9 411 aa16.89■□□□□ 0.29
SMARCA4-219ENST00000592604 CARD10Q9BWT7 1032 aa16.89■□□□□ 0.29
SMARCA4-219ENST00000592604 TMOD3Q9NYL9 352 aa16.89■□□□□ 0.29
SMARCA4-219ENST00000592604 ANKRD36CQ5JPF3 1778 aa16.89■□□□□ 0.29
SMARCA4-219ENST00000592604 TOGARAM1Q9Y4F4 1720 aa16.89■□□□□ 0.29
SMARCA4-219ENST00000592604 MROH5Q6ZUA9 1318 aa16.88■□□□□ 0.29
SMARCA4-219ENST00000592604 PNPLA7Q6ZV29 1317 aa16.88■□□□□ 0.29
SMARCA4-219ENST00000592604 ERICH2A1L162 156 aa16.88■□□□□ 0.29
SMARCA4-219ENST00000592604 STARD3NLO95772 234 aa16.88■□□□□ 0.29
SMARCA4-219ENST00000592604 GSDMAQ96QA5 445 aa16.88■□□□□ 0.29
SMARCA4-219ENST00000592604 ANKZF1Q9H8Y5 726 aa16.88■□□□□ 0.29
SMARCA4-219ENST00000592604 LZTFL1Q9NQ48 299 aa16.88■□□□□ 0.29
SMARCA4-219ENST00000592604 COL5A2P05997 1499 aaPredicted RBP16.88■□□□□ 0.29
SMARCA4-219ENST00000592604 BCORQ6W2J9 1755 aa16.88■□□□□ 0.29
SMARCA4-219ENST00000592604 ITIH6Q6UXX5 1313 aa16.88■□□□□ 0.29
SMARCA4-219ENST00000592604 SYNRGQ9UMZ2 1314 aa16.88■□□□□ 0.29
SMARCA4-219ENST00000592604 A0A087X0B3 334 aa16.88■□□□□ 0.29
SMARCA4-219ENST00000592604 MFAP3LO75121 409 aa16.88■□□□□ 0.29
SMARCA4-219ENST00000592604 PPP2R5BQ15173 497 aa16.88■□□□□ 0.29
SMARCA4-219ENST00000592604 EXOC4Q96A65 974 aa16.88■□□□□ 0.29
SMARCA4-219ENST00000592604 PAGE5Q96GU1 130 aa16.88■□□□□ 0.29
SMARCA4-219ENST00000592604 ZKSCAN3Q9BRR0 538 aa16.88■□□□□ 0.29
SMARCA4-219ENST00000592604 RNF26Q9BY78 433 aaPredicted RBP16.88■□□□□ 0.29
SMARCA4-219ENST00000592604 NACAP1Q9BZK3 213 aa16.88■□□□□ 0.29
SMARCA4-219ENST00000592604 PRDM11Q9NQV5 511 aa16.88■□□□□ 0.29
SMARCA4-219ENST00000592604 LRP5O75197 1615 aa16.87■□□□□ 0.29
SMARCA4-219ENST00000592604 TRIM75PA6NK02 468 aa16.87■□□□□ 0.29
SMARCA4-219ENST00000592604 CADPS2Q86UW7 1296 aa16.87■□□□□ 0.29
SMARCA4-219ENST00000592604 ZNF654Q8IZM8 581 aa16.87■□□□□ 0.29
SMARCA4-219ENST00000592604 PPP1R3GB7ZBB8 358 aa16.87■□□□□ 0.29
SMARCA4-219ENST00000592604 DPYDQ12882 1025 aa16.87■□□□□ 0.29
SMARCA4-219ENST00000592604 RASGRF1Q13972 1273 aa16.87■□□□□ 0.29
SMARCA4-219ENST00000592604 RRP12Q5JTH9 1297 aaKnown RBP16.87■□□□□ 0.29
SMARCA4-219ENST00000592604 BEND6Q5SZJ8 279 aaPredicted RBP16.87■□□□□ 0.29
SMARCA4-219ENST00000592604 CMTR1Q8N1G2 835 aaKnown RBP16.87■□□□□ 0.29
SMARCA4-219ENST00000592604 CCDC82Q8N4S0 544 aa16.87■□□□□ 0.29
SMARCA4-219ENST00000592604 PRKAB2O43741 272 aa16.86■□□□□ 0.29
SMARCA4-219ENST00000592604 ATP2B1P20020 1258 aa16.86■□□□□ 0.29
SMARCA4-219ENST00000592604 FILIP1LQ4L180 1135 aa16.86■□□□□ 0.29
SMARCA4-219ENST00000592604 CNGA4Q8IV77 575 aa16.86■□□□□ 0.29
SMARCA4-219ENST00000592604 EPSTI1Q96J88 318 aa16.86■□□□□ 0.29
SMARCA4-219ENST00000592604 SLC20A2Q08357 652 aa16.86■□□□□ 0.29
SMARCA4-219ENST00000592604 FERMT2Q96AC1 680 aa16.86■□□□□ 0.29
SMARCA4-219ENST00000592604 SHISA4Q96DD7 197 aa16.86■□□□□ 0.29
SMARCA4-219ENST00000592604 RNF41Q9H4P4 317 aaPredicted RBP16.86■□□□□ 0.29
SMARCA4-219ENST00000592604 TRMT112Q9UI30 125 aaKnown RBP16.86■□□□□ 0.29
SMARCA4-219ENST00000592604 ADAM21Q9UKJ8 722 aa16.86■□□□□ 0.29
SMARCA4-219ENST00000592604 ASAP1Q9ULH1 1129 aa16.86■□□□□ 0.29
SMARCA4-219ENST00000592604 TTF2Q9UNY4 1162 aaKnown RBP16.86■□□□□ 0.29
SMARCA4-219ENST00000592604 BCL9LQ86UU0 1499 aa16.86■□□□□ 0.29
SMARCA4-219ENST00000592604 A0A0U1RQJ8 604 aa16.86■□□□□ 0.29
SMARCA4-219ENST00000592604 SLC5A1P13866 664 aa16.86■□□□□ 0.29
SMARCA4-219ENST00000592604 TDO2P48775 406 aa16.86■□□□□ 0.29
SMARCA4-219ENST00000592604 CPLX3Q8WVH0 158 aa16.86■□□□□ 0.29
SMARCA4-219ENST00000592604 ATRIPQ8WXE1 791 aa16.86■□□□□ 0.29
SMARCA4-219ENST00000592604 LRRC10BA6NIK2 292 aa16.85■□□□□ 0.29
SMARCA4-219ENST00000592604 H3BQF6 201 aa16.85■□□□□ 0.29
SMARCA4-219ENST00000592604 BMP15O95972 392 aa16.85■□□□□ 0.29
SMARCA4-219ENST00000592604 CAPN2P17655 700 aa16.85■□□□□ 0.29
SMARCA4-219ENST00000592604 CASP14P31944 242 aa16.85■□□□□ 0.29
SMARCA4-219ENST00000592604 AFMP43652 599 aa16.85■□□□□ 0.29
SMARCA4-219ENST00000592604 STX17P56962 302 aa16.85■□□□□ 0.29
SMARCA4-219ENST00000592604 ZNF569Q5MCW4 686 aa16.85■□□□□ 0.29
SMARCA4-219ENST00000592604 KLHL10Q6JEL2 608 aa16.85■□□□□ 0.29
SMARCA4-219ENST00000592604 LCORLQ8N3X6 602 aa16.85■□□□□ 0.29
SMARCA4-219ENST00000592604 SLC4A4Q9Y6R1 1079 aa16.85■□□□□ 0.29
SMARCA4-219ENST00000592604 MYCNP04198 464 aaPredicted RBP16.85■□□□□ 0.29
SMARCA4-219ENST00000592604 GYPCP04921 128 aa16.85■□□□□ 0.29
SMARCA4-219ENST00000592604 XBP1P17861 261 aa16.85■□□□□ 0.29
SMARCA4-219ENST00000592604 SEC23AQ15436 765 aa16.85■□□□□ 0.29
SMARCA4-219ENST00000592604 TMTC1Q8IUR5 882 aa16.85■□□□□ 0.29
SMARCA4-219ENST00000592604 HELBQ8NG08 1087 aaPredicted RBP16.85■□□□□ 0.29
SMARCA4-219ENST00000592604 NUP133Q8WUM0 1156 aa16.85■□□□□ 0.29
SMARCA4-219ENST00000592604 SYMPKQ92797 1274 aaKnown RBP16.85■□□□□ 0.29
SMARCA4-219ENST00000592604 AK7Q96M32 723 aa16.85■□□□□ 0.29
SMARCA4-219ENST00000592604 PHF20Q9BVI0 1012 aa16.85■□□□□ 0.29
SMARCA4-219ENST00000592604 ZSWIM4Q9H7M6 989 aa16.85■□□□□ 0.29
SMARCA4-219ENST00000592604 TOMM22Q9NS69 142 aa16.85■□□□□ 0.29
SMARCA4-219ENST00000592604 NUP98P52948 1817 aa16.84■□□□□ 0.29
SMARCA4-219ENST00000592604 MYH8P13535 1937 aa16.84■□□□□ 0.29
SMARCA4-219ENST00000592604 CTAGE9A4FU28 777 aa16.84■□□□□ 0.29
SMARCA4-219ENST00000592604 PKN1Q16512 942 aa16.84■□□□□ 0.29
SMARCA4-219ENST00000592604 HDXQ7Z353 690 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms