RNA–Protein interactions for RNA: ENST00000592299.5

SPHK1-210, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-210ENST00000592299 SYT1P21579 422 aa26.58■■□□□ 1.84
SPHK1-210ENST00000592299 LARP1BQ659C4 914 aaKnown RBP26.58■■□□□ 1.84
SPHK1-210ENST00000592299 CDAN1Q8IWY9 1227 aa26.58■■□□□ 1.84
SPHK1-210ENST00000592299 ANKS1AQ92625 1134 aa26.58■■□□□ 1.84
SPHK1-210ENST00000592299 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.58■■□□□ 1.84
SPHK1-210ENST00000592299 PLIN4Q96Q06 1357 aa26.57■■□□□ 1.84
SPHK1-210ENST00000592299 DDAH1O94760 285 aa26.57■■□□□ 1.84
SPHK1-210ENST00000592299 CALM1P0DP23 149 aa26.57■■□□□ 1.84
SPHK1-210ENST00000592299 CALM2P0DP24 149 aa26.57■■□□□ 1.84
SPHK1-210ENST00000592299 CALM3P0DP25 149 aa26.57■■□□□ 1.84
SPHK1-210ENST00000592299 TROAPQ12815 778 aa26.57■■□□□ 1.84
SPHK1-210ENST00000592299 FOXD4L5Q5VV16 416 aaPredicted RBP26.57■■□□□ 1.84
SPHK1-210ENST00000592299 TATDN1Q6P1N9 297 aa26.57■■□□□ 1.84
SPHK1-210ENST00000592299 PNMA1Q8ND90 353 aa26.57■■□□□ 1.84
SPHK1-210ENST00000592299 FOXD4L4Q8WXT5 416 aaPredicted RBP26.57■■□□□ 1.84
SPHK1-210ENST00000592299 FAM217BQ9NTX9 383 aaPredicted RBP26.57■■□□□ 1.84
SPHK1-210ENST00000592299 CCDC196A0A1B0GTZ2 297 aa26.56■■□□□ 1.84
SPHK1-210ENST00000592299 TMEM47Q9BQJ4 181 aa26.56■■□□□ 1.84
SPHK1-210ENST00000592299 NID2Q14112 1375 aa26.56■■□□□ 1.84
SPHK1-210ENST00000592299 STX6O43752 255 aa26.55■■□□□ 1.84
SPHK1-210ENST00000592299 CDKL5O76039 1030 aa26.55■■□□□ 1.84
SPHK1-210ENST00000592299 PDCP20941 246 aa26.55■■□□□ 1.84
SPHK1-210ENST00000592299 ANGEL2Q5VTE6 544 aaKnown RBP26.55■■□□□ 1.84
SPHK1-210ENST00000592299 MTMR4Q9NYA4 1195 aa26.55■■□□□ 1.84
SPHK1-210ENST00000592299 KIF3AQ9Y496 699 aa26.55■■□□□ 1.84
SPHK1-210ENST00000592299 MIGA2Q7L4E1 593 aa26.55■■□□□ 1.84
SPHK1-210ENST00000592299 ZDHHC9Q9Y397 364 aa26.55■■□□□ 1.84
SPHK1-210ENST00000592299 PPP2R5BQ15173 497 aa26.54■■□□□ 1.84
SPHK1-210ENST00000592299 TNPO1Q92973 898 aaKnown RBP26.54■■□□□ 1.84
SPHK1-210ENST00000592299 ANP32EQ9BTT0 268 aa26.54■■□□□ 1.84
SPHK1-210ENST00000592299 DEFB129Q9H1M3 183 aa26.54■■□□□ 1.84
SPHK1-210ENST00000592299 MTMR7Q9Y216 660 aa26.54■■□□□ 1.84
SPHK1-210ENST00000592299 WDR33Q9C0J8 1336 aaKnown RBP26.53■■□□□ 1.84
SPHK1-210ENST00000592299 GDF11O95390 407 aa26.53■■□□□ 1.84
SPHK1-210ENST00000592299 BRD1O95696 1058 aa26.53■■□□□ 1.84
SPHK1-210ENST00000592299 HIRAP54198 1017 aaPredicted RBP26.53■■□□□ 1.84
SPHK1-210ENST00000592299 CLEC10AQ8IUN9 316 aa26.53■■□□□ 1.84
SPHK1-210ENST00000592299 CTCFLQ8NI51 663 aaPredicted RBP26.53■■□□□ 1.84
SPHK1-210ENST00000592299 ADARB2Q9NS39 739 aaKnown RBP26.53■■□□□ 1.84
SPHK1-210ENST00000592299 ORC3Q9UBD5 711 aaPredicted RBP26.53■■□□□ 1.84
SPHK1-210ENST00000592299 IGKV6D-41A0A0C4DH26 115 aa26.53■■□□□ 1.84
SPHK1-210ENST00000592299 VPS37CA5D8V6 355 aaPredicted RBP26.53■■□□□ 1.84
SPHK1-210ENST00000592299 TOP1P11387 765 aaKnown RBP26.53■■□□□ 1.84
SPHK1-210ENST00000592299 NTRK3Q16288 839 aa26.53■■□□□ 1.84
SPHK1-210ENST00000592299 ABCB5Q2M3G0 1257 aa26.53■■□□□ 1.84
SPHK1-210ENST00000592299 CCDC82Q8N4S0 544 aa26.53■■□□□ 1.84
SPHK1-210ENST00000592299 PHKBQ93100 1093 aa26.53■■□□□ 1.84
SPHK1-210ENST00000592299 GGA3Q9NZ52 723 aa26.53■■□□□ 1.84
SPHK1-210ENST00000592299 PGAP2Q9UHJ9 254 aa26.53■■□□□ 1.84
SPHK1-210ENST00000592299 SHROOM1Q2M3G4 852 aaPredicted RBP26.52■■□□□ 1.84
SPHK1-210ENST00000592299 APOBEC3FQ8IUX4 373 aaKnown RBP26.52■■□□□ 1.84
SPHK1-210ENST00000592299 CMTR1Q8N1G2 835 aaKnown RBP26.52■■□□□ 1.84
SPHK1-210ENST00000592299 RBM28Q9NW13 759 aaKnown RBP26.52■■□□□ 1.84
SPHK1-210ENST00000592299 CLIP2Q9UDT6 1046 aa26.52■■□□□ 1.84
SPHK1-210ENST00000592299 ZC3H4Q9UPT8 1303 aaKnown RBP26.51■■□□□ 1.84
SPHK1-210ENST00000592299 TTLL1O95922 423 aa26.51■■□□□ 1.83
SPHK1-210ENST00000592299 FDPSP14324 419 aaKnown RBP26.51■■□□□ 1.83
SPHK1-210ENST00000592299 ATP2B2Q01814 1243 aa26.51■■□□□ 1.83
SPHK1-210ENST00000592299 TBC1D12O60347 775 aa26.51■■□□□ 1.83
SPHK1-210ENST00000592299 IFNAR1P17181 557 aa26.51■■□□□ 1.83
SPHK1-210ENST00000592299 NOVP48745 357 aa26.51■■□□□ 1.83
SPHK1-210ENST00000592299 FOSBP53539 338 aa26.51■■□□□ 1.83
SPHK1-210ENST00000592299 TMEM179Q6ZVK1 233 aa26.51■■□□□ 1.83
SPHK1-210ENST00000592299 TEPSINQ96N21 525 aa26.51■■□□□ 1.83
SPHK1-210ENST00000592299 CABP5Q9NP86 173 aa26.51■■□□□ 1.83
SPHK1-210ENST00000592299 SSRP1Q08945 709 aaKnown RBP26.5■■□□□ 1.83
SPHK1-210ENST00000592299 SLC26A6Q9BXS9 759 aa26.5■■□□□ 1.83
SPHK1-210ENST00000592299 GLTPD2A6NH11 291 aa26.49■■□□□ 1.83
SPHK1-210ENST00000592299 GH2P01242 217 aa26.49■■□□□ 1.83
SPHK1-210ENST00000592299 PDIA4P13667 645 aaKnown RBP26.49■■□□□ 1.83
SPHK1-210ENST00000592299 KIF5BP33176 963 aa26.49■■□□□ 1.83
SPHK1-210ENST00000592299 RRP1BQ14684 758 aaKnown RBP26.49■■□□□ 1.83
SPHK1-210ENST00000592299 SEPT2Q15019 361 aa26.49■■□□□ 1.83
SPHK1-210ENST00000592299 PPP4R3BQ5MIZ7 849 aa26.49■■□□□ 1.83
SPHK1-210ENST00000592299 KANSL2Q9H9L4 492 aa26.49■■□□□ 1.83
SPHK1-210ENST00000592299 GREB1LQ9C091 1923 aaPredicted RBP26.49■■□□□ 1.83
SPHK1-210ENST00000592299 H3BQV1 296 aa26.49■■□□□ 1.83
SPHK1-210ENST00000592299 ZSCAN22P10073 491 aaPredicted RBP26.49■■□□□ 1.83
SPHK1-210ENST00000592299 IFFO2Q5TF58 517 aa26.49■■□□□ 1.83
SPHK1-210ENST00000592299 TRIM22Q8IYM9 498 aa26.49■■□□□ 1.83
SPHK1-210ENST00000592299 LRRC47Q8N1G4 583 aaKnown RBP26.49■■□□□ 1.83
SPHK1-210ENST00000592299 L3MBTL3Q96JM7 780 aaPredicted RBP26.49■■□□□ 1.83
SPHK1-210ENST00000592299 MTMR6Q9Y217 621 aa26.49■■□□□ 1.83
SPHK1-210ENST00000592299 PLEKHA8P1O95397 391 aa26.48■■□□□ 1.83
SPHK1-210ENST00000592299 FMNL1O95466 1100 aaPredicted RBP26.47■■□□□ 1.83
SPHK1-210ENST00000592299 MAP3K14Q99558 947 aa26.47■■□□□ 1.83
SPHK1-210ENST00000592299 JAG1P78504 1218 aa26.46■■□□□ 1.83
SPHK1-210ENST00000592299 ICA1Q05084 483 aa26.46■■□□□ 1.83
SPHK1-210ENST00000592299 NBPF12Q5TAG4 269 aaPredicted RBP26.46■■□□□ 1.83
SPHK1-210ENST00000592299 CDC37L1Q7L3B6 337 aa26.46■■□□□ 1.83
SPHK1-210ENST00000592299 MYH4Q9Y623 1939 aa26.46■■□□□ 1.83
SPHK1-210ENST00000592299 EEF2P13639 858 aaKnown RBP26.46■■□□□ 1.83
SPHK1-210ENST00000592299 GUCY1A2P33402 732 aa26.46■■□□□ 1.83
SPHK1-210ENST00000592299 MAP3K10Q02779 954 aa26.46■■□□□ 1.83
SPHK1-210ENST00000592299 GRM4Q14833 912 aa26.46■■□□□ 1.83
SPHK1-210ENST00000592299 PRAMEF18Q5VWM3 479 aa26.46■■□□□ 1.83
SPHK1-210ENST00000592299 TMTC3Q6ZXV5 915 aa26.46■■□□□ 1.83
SPHK1-210ENST00000592299 POLR2AP24928 1970 aaKnown RBP26.45■■□□□ 1.83
SPHK1-210ENST00000592299 AKAP17AQ02040 695 aaKnown RBP26.45■■□□□ 1.82
SPHK1-210ENST00000592299 NBPF11Q86T75 865 aa26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms