RNA–Protein interactions for RNA: ENST00000592158.1

SMARCA4-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 409 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-218ENST00000592158 LOC285556D6RIA3 1793 aa11.42□□□□□ -0.58
SMARCA4-218ENST00000592158 A0A1W2PQ45 241 aaPredicted RBP11.42□□□□□ -0.58
SMARCA4-218ENST00000592158 A0A1W2PQY0 241 aa11.42□□□□□ -0.58
SMARCA4-218ENST00000592158 PHF20L1A8MW92 1017 aa11.42□□□□□ -0.58
SMARCA4-218ENST00000592158 H3BQ06 376 aaPredicted RBP11.42□□□□□ -0.58
SMARCA4-218ENST00000592158 GALR2O43603 387 aaPredicted RBP11.42□□□□□ -0.58
SMARCA4-218ENST00000592158 IGHMBP2P38935 993 aaKnown RBP11.42□□□□□ -0.58
SMARCA4-218ENST00000592158 TAP1Q03518 808 aa11.42□□□□□ -0.58
SMARCA4-218ENST00000592158 NBPF20Q3BBV1 942 aa11.42□□□□□ -0.58
SMARCA4-218ENST00000592158 MCTP2Q6DN12 878 aa11.42□□□□□ -0.58
SMARCA4-218ENST00000592158 C15orf52Q6ZUT6 534 aaKnown RBP11.42□□□□□ -0.58
SMARCA4-218ENST00000592158 KIAA2013Q8IYS2 634 aa11.42□□□□□ -0.58
SMARCA4-218ENST00000592158 NEK9Q8TD19 979 aa11.42□□□□□ -0.58
SMARCA4-218ENST00000592158 CWC22Q9HCG8 908 aaKnown RBP11.42□□□□□ -0.58
SMARCA4-218ENST00000592158 LMCD1Q9NZU5 365 aa11.42□□□□□ -0.58
SMARCA4-218ENST00000592158 FAM50BQ9Y247 325 aa11.42□□□□□ -0.58
SMARCA4-218ENST00000592158 DOCK1Q14185 1865 aa11.41□□□□□ -0.58
SMARCA4-218ENST00000592158 SEPT4O43236 478 aa11.41□□□□□ -0.58
SMARCA4-218ENST00000592158 ARHGEF15O94989 841 aa11.41□□□□□ -0.58
SMARCA4-218ENST00000592158 PCCAP05165 728 aaPredicted RBP11.41□□□□□ -0.58
SMARCA4-218ENST00000592158 ATP2A2P16615 1042 aaKnown RBP11.41□□□□□ -0.58
SMARCA4-218ENST00000592158 CTSWP56202 376 aa11.41□□□□□ -0.58
SMARCA4-218ENST00000592158 TCP10Q12799 353 aa11.41□□□□□ -0.58
SMARCA4-218ENST00000592158 Q3C1V9 767 aa11.41□□□□□ -0.58
SMARCA4-218ENST00000592158 FAM47AQ5JRC9 791 aa11.41□□□□□ -0.58
SMARCA4-218ENST00000592158 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.41□□□□□ -0.58
SMARCA4-218ENST00000592158 SMCHD1A6NHR9 2005 aa11.4□□□□□ -0.58
SMARCA4-218ENST00000592158 ZBBXA8MT70 800 aa11.4□□□□□ -0.58
SMARCA4-218ENST00000592158 NUBP1P53384 320 aa11.4□□□□□ -0.58
SMARCA4-218ENST00000592158 CHRNDQ07001 517 aa11.4□□□□□ -0.58
SMARCA4-218ENST00000592158 GRIK5Q16478 980 aa11.4□□□□□ -0.58
SMARCA4-218ENST00000592158 TTLL11Q8NHH1 800 aa11.4□□□□□ -0.58
SMARCA4-218ENST00000592158 NPLOC4Q8TAT6 608 aa11.4□□□□□ -0.58
SMARCA4-218ENST00000592158 TEKT1Q969V4 418 aa11.4□□□□□ -0.58
SMARCA4-218ENST00000592158 MYH3P11055 1940 aa11.4□□□□□ -0.58
SMARCA4-218ENST00000592158 SLC4A2P04920 1241 aa11.39□□□□□ -0.59
SMARCA4-218ENST00000592158 ERVK-9P63128 1117 aa11.39□□□□□ -0.59
SMARCA4-218ENST00000592158 ERVK-24P63145 666 aa11.39□□□□□ -0.59
SMARCA4-218ENST00000592158 IRX3P78415 501 aaPredicted RBP11.39□□□□□ -0.59
SMARCA4-218ENST00000592158 HDLBPQ00341 1268 aaKnown RBP11.39□□□□□ -0.59
SMARCA4-218ENST00000592158 CNGB1Q14028 1251 aaPredicted RBP11.39□□□□□ -0.59
SMARCA4-218ENST00000592158 CC2D1BQ5T0F9 858 aaKnown RBP11.39□□□□□ -0.59
SMARCA4-218ENST00000592158 APOBEC3HQ6NTF7 200 aaKnown RBP11.39□□□□□ -0.59
SMARCA4-218ENST00000592158 GDPD5Q8WTR4 605 aa11.39□□□□□ -0.59
SMARCA4-218ENST00000592158 ZDHHC15Q96MV8 337 aa11.39□□□□□ -0.59
SMARCA4-218ENST00000592158 NDUFB9Q9Y6M9 179 aa11.39□□□□□ -0.59
SMARCA4-218ENST00000592158 TAF5LO75529 589 aa11.38□□□□□ -0.59
SMARCA4-218ENST00000592158 CYP2C18P33260 490 aa11.38□□□□□ -0.59
SMARCA4-218ENST00000592158 HMGCS2P54868 508 aa11.38□□□□□ -0.59
SMARCA4-218ENST00000592158 ZXDAP98168 799 aa11.38□□□□□ -0.59
SMARCA4-218ENST00000592158 SPRED2Q7Z698 418 aa11.38□□□□□ -0.59
SMARCA4-218ENST00000592158 MPHOSPH8Q99549 860 aa11.38□□□□□ -0.59
SMARCA4-218ENST00000592158 STARD7Q9NQZ5 370 aa11.38□□□□□ -0.59
SMARCA4-218ENST00000592158 RBPJLQ9UBG7 517 aa11.38□□□□□ -0.59
SMARCA4-218ENST00000592158 HOXC6P09630 235 aa11.37□□□□□ -0.59
SMARCA4-218ENST00000592158 HERVK_113P62684 666 aa11.37□□□□□ -0.59
SMARCA4-218ENST00000592158 SPP2Q13103 211 aa11.37□□□□□ -0.59
SMARCA4-218ENST00000592158 RNF180Q86T96 592 aa11.37□□□□□ -0.59
SMARCA4-218ENST00000592158 POP1Q99575 1024 aaKnown RBP11.37□□□□□ -0.59
SMARCA4-218ENST00000592158 LRRFIP2Q9Y608 721 aaKnown RBP11.37□□□□□ -0.59
SMARCA4-218ENST00000592158 A0A1B0GUL6 1792 aa11.36□□□□□ -0.59
SMARCA4-218ENST00000592158 GLRX3O76003 335 aaKnown RBP11.36□□□□□ -0.59
SMARCA4-218ENST00000592158 IGHA2P01877 340 aa11.36□□□□□ -0.59
SMARCA4-218ENST00000592158 LURAP1LQ8IV03 231 aa11.36□□□□□ -0.59
SMARCA4-218ENST00000592158 PAGR1Q9BTK6 254 aa11.36□□□□□ -0.59
SMARCA4-218ENST00000592158 XPNPEP3Q9NQH7 507 aa11.36□□□□□ -0.59
SMARCA4-218ENST00000592158 CHPF2Q9P2E5 772 aa11.36□□□□□ -0.59
SMARCA4-218ENST00000592158 TSPYL4Q9UJ04 414 aa11.36□□□□□ -0.59
SMARCA4-218ENST00000592158 DOCK2Q92608 1830 aa11.35□□□□□ -0.59
SMARCA4-218ENST00000592158 DLG5Q8TDM6 1919 aa11.35□□□□□ -0.59
SMARCA4-218ENST00000592158 SLC15A5A6NIM6 579 aa11.35□□□□□ -0.59
SMARCA4-218ENST00000592158 CTNND1O60716 968 aaKnown RBP11.35□□□□□ -0.59
SMARCA4-218ENST00000592158 PGK1P00558 417 aa11.35□□□□□ -0.59
SMARCA4-218ENST00000592158 PTPREP23469 700 aa11.35□□□□□ -0.59
SMARCA4-218ENST00000592158 COL9A3Q14050 684 aaPredicted RBP11.35□□□□□ -0.59
SMARCA4-218ENST00000592158 RSPO4Q2I0M5 234 aaPredicted RBP11.35□□□□□ -0.59
SMARCA4-218ENST00000592158 PRAMEF19Q5SWL8 479 aa11.35□□□□□ -0.59
SMARCA4-218ENST00000592158 WDR78Q5VTH9 848 aa11.35□□□□□ -0.59
SMARCA4-218ENST00000592158 CCDC191Q8NCU4 936 aa11.35□□□□□ -0.59
SMARCA4-218ENST00000592158 MROH7Q68CQ1 1323 aa11.35□□□□□ -0.59
SMARCA4-218ENST00000592158 CYSRT1A8MQ03 144 aa11.34□□□□□ -0.59
SMARCA4-218ENST00000592158 PER1O15534 1290 aaPredicted RBP11.34□□□□□ -0.59
SMARCA4-218ENST00000592158 SIGLEC14Q08ET2 396 aa11.34□□□□□ -0.59
SMARCA4-218ENST00000592158 NFIAQ12857 509 aa11.34□□□□□ -0.59
SMARCA4-218ENST00000592158 KIAA0319Q5VV43 1072 aa11.34□□□□□ -0.59
SMARCA4-218ENST00000592158 EP400NLQ6ZTU2 488 aa11.34□□□□□ -0.59
SMARCA4-218ENST00000592158 NUP133Q8WUM0 1156 aa11.34□□□□□ -0.59
SMARCA4-218ENST00000592158 ASIC4Q96FT7 647 aa11.34□□□□□ -0.59
SMARCA4-218ENST00000592158 MYD88Q99836 296 aa11.34□□□□□ -0.59
SMARCA4-218ENST00000592158 CWC25Q9NXE8 425 aaPredicted RBP11.34□□□□□ -0.59
SMARCA4-218ENST00000592158 SPEGQ15772 3267 aa11.33□□□□□ -0.6
SMARCA4-218ENST00000592158 ZZEF1O43149 2961 aa11.33□□□□□ -0.6
SMARCA4-218ENST00000592158 SLURP2P0DP57 97 aa11.33□□□□□ -0.6
SMARCA4-218ENST00000592158 DMWDQ09019 674 aa11.33□□□□□ -0.6
SMARCA4-218ENST00000592158 ZNF280CQ8ND82 737 aa11.33□□□□□ -0.6
SMARCA4-218ENST00000592158 BPTFQ12830 3046 aa11.32□□□□□ -0.6
SMARCA4-218ENST00000592158 RARBP10826 455 aa11.32□□□□□ -0.6
SMARCA4-218ENST00000592158 CDK7P50613 346 aa11.32□□□□□ -0.6
SMARCA4-218ENST00000592158 ACLYP53396 1101 aa11.32□□□□□ -0.6
SMARCA4-218ENST00000592158 GRB14Q14449 540 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms