RNA–Protein interactions for RNA: ENST00000592078.1

CXXC1-217, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-217ENST00000592078 DEFB123Q8N688 67 aa18.6■□□□□ 0.57
CXXC1-217ENST00000592078 SZT2Q5T011 3432 aa18.59■□□□□ 0.57
CXXC1-217ENST00000592078 CYP2E1P05181 493 aaPredicted RBP18.59■□□□□ 0.57
CXXC1-217ENST00000592078 ZKSCAN1P17029 563 aaPredicted RBP18.59■□□□□ 0.57
CXXC1-217ENST00000592078 RGS2P41220 211 aa18.59■□□□□ 0.57
CXXC1-217ENST00000592078 PPP4CP60510 307 aa18.59■□□□□ 0.57
CXXC1-217ENST00000592078 CCNA1P78396 465 aa18.59■□□□□ 0.57
CXXC1-217ENST00000592078 DIS3LQ8TF46 1054 aaKnown RBP18.59■□□□□ 0.57
CXXC1-217ENST00000592078 UBE2OQ9C0C9 1292 aaKnown RBP18.59■□□□□ 0.57
CXXC1-217ENST00000592078 PAG1Q9NWQ8 432 aa18.59■□□□□ 0.57
CXXC1-217ENST00000592078 MSCO60682 206 aa18.58■□□□□ 0.56
CXXC1-217ENST00000592078 PRKAR2AP13861 404 aaKnown RBP18.58■□□□□ 0.56
CXXC1-217ENST00000592078 HERVK_113P62684 666 aa18.58■□□□□ 0.56
CXXC1-217ENST00000592078 TTF1Q15361 905 aaPredicted RBP18.58■□□□□ 0.56
CXXC1-217ENST00000592078 PI16Q6UXB8 463 aa18.58■□□□□ 0.56
CXXC1-217ENST00000592078 CRACR2BQ8N4Y2 399 aaPredicted RBP18.58■□□□□ 0.56
CXXC1-217ENST00000592078 KBTBD3Q8NAB2 608 aa18.58■□□□□ 0.56
CXXC1-217ENST00000592078 TRIB2Q92519 343 aa18.58■□□□□ 0.56
CXXC1-217ENST00000592078 DOCK3Q8IZD9 2030 aa18.57■□□□□ 0.56
CXXC1-217ENST00000592078 HLA-DOAP06340 250 aa18.57■□□□□ 0.56
CXXC1-217ENST00000592078 CYP2B6P20813 491 aa18.57■□□□□ 0.56
CXXC1-217ENST00000592078 MAGEA10P43363 369 aaPredicted RBP18.57■□□□□ 0.56
CXXC1-217ENST00000592078 MTMR2Q13614 643 aa18.57■□□□□ 0.56
CXXC1-217ENST00000592078 FAM109BQ6ICB4 259 aaPredicted RBP18.57■□□□□ 0.56
CXXC1-217ENST00000592078 NAA16Q6N069 864 aaPredicted RBP18.57■□□□□ 0.56
CXXC1-217ENST00000592078 CCDC84Q86UT8 332 aaPredicted RBP18.57■□□□□ 0.56
CXXC1-217ENST00000592078 ZNF384Q8TF68 577 aa18.57■□□□□ 0.56
CXXC1-217ENST00000592078 P2RX7Q99572 595 aaKnown RBP18.57■□□□□ 0.56
CXXC1-217ENST00000592078 ANTXR1Q9H6X2 564 aa18.57■□□□□ 0.56
CXXC1-217ENST00000592078 SNRKQ9NRH2 765 aa18.57■□□□□ 0.56
CXXC1-217ENST00000592078 ZMYND8Q9ULU4 1186 aaPredicted RBP18.57■□□□□ 0.56
CXXC1-217ENST00000592078 GOLIM4O00461 696 aa18.56■□□□□ 0.56
CXXC1-217ENST00000592078 COL6A1P12109 1028 aa18.56■□□□□ 0.56
CXXC1-217ENST00000592078 ERVK-9P63128 1117 aa18.56■□□□□ 0.56
CXXC1-217ENST00000592078 ERVK-24P63145 666 aa18.56■□□□□ 0.56
CXXC1-217ENST00000592078 USP17L2Q6R6M4 530 aa18.56■□□□□ 0.56
CXXC1-217ENST00000592078 EDC3Q96F86 508 aaKnown RBP18.56■□□□□ 0.56
CXXC1-217ENST00000592078 APBA2Q99767 749 aa18.56■□□□□ 0.56
CXXC1-217ENST00000592078 CWC22Q9HCG8 908 aaKnown RBP18.56■□□□□ 0.56
CXXC1-217ENST00000592078 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.56■□□□□ 0.56
CXXC1-217ENST00000592078 NDUFB9Q9Y6M9 179 aa18.56■□□□□ 0.56
CXXC1-217ENST00000592078 FAM196BA6NMK8 535 aa18.55■□□□□ 0.56
CXXC1-217ENST00000592078 PLEKHH3Q7Z736 793 aa18.55■□□□□ 0.56
CXXC1-217ENST00000592078 USP6NLQ92738 828 aa18.55■□□□□ 0.56
CXXC1-217ENST00000592078 DNAJC2Q99543 621 aaKnown RBP18.55■□□□□ 0.56
CXXC1-217ENST00000592078 PIH1D3Q9NQM4 214 aaKnown RBP18.55■□□□□ 0.56
CXXC1-217ENST00000592078 MTMR10Q9NXD2 777 aa18.55■□□□□ 0.56
CXXC1-217ENST00000592078 RABGAP1Q9Y3P9 1069 aa18.55■□□□□ 0.56
CXXC1-217ENST00000592078 TRIM6-TRIM34B2RNG4 842 aa18.54■□□□□ 0.56
CXXC1-217ENST00000592078 SLURP2P0DP57 97 aa18.54■□□□□ 0.56
CXXC1-217ENST00000592078 USP14P54578 494 aa18.54■□□□□ 0.56
CXXC1-217ENST00000592078 CACNB2Q08289 660 aaPredicted RBP18.54■□□□□ 0.56
CXXC1-217ENST00000592078 MORN1Q5T089 497 aa18.54■□□□□ 0.56
CXXC1-217ENST00000592078 MFSD14CQ5VZR4 134 aa18.54■□□□□ 0.56
CXXC1-217ENST00000592078 GPR142Q7Z601 462 aa18.54■□□□□ 0.56
CXXC1-217ENST00000592078 SH3RF3Q8TEJ3 882 aaPredicted RBP18.54■□□□□ 0.56
CXXC1-217ENST00000592078 RBPJLQ9UBG7 517 aa18.54■□□□□ 0.56
CXXC1-217ENST00000592078 ATAD5Q96QE3 1844 aa18.53■□□□□ 0.56
CXXC1-217ENST00000592078 TBC1D9Q6ZT07 1266 aa18.53■□□□□ 0.56
CXXC1-217ENST00000592078 RILPL2Q969X0 211 aa18.53■□□□□ 0.56
CXXC1-217ENST00000592078 C12orf42Q96LP6 360 aa18.53■□□□□ 0.56
CXXC1-217ENST00000592078 LBHD1Q9BQE6 289 aaPredicted RBP18.53■□□□□ 0.56
CXXC1-217ENST00000592078 ALPK3Q96L96 1907 aa18.53■□□□□ 0.56
CXXC1-217ENST00000592078 PFASO15067 1338 aa18.52■□□□□ 0.56
CXXC1-217ENST00000592078 DDX60LQ5H9U9 1706 aaKnown RBP18.52■□□□□ 0.56
CXXC1-217ENST00000592078 USP17L15C9J2P7 530 aa18.52■□□□□ 0.56
CXXC1-217ENST00000592078 USP17L13C9JLJ4 530 aa18.52■□□□□ 0.56
CXXC1-217ENST00000592078 USP17L11C9JVI0 530 aa18.52■□□□□ 0.56
CXXC1-217ENST00000592078 USP17L18D6R9N7 530 aa18.52■□□□□ 0.56
CXXC1-217ENST00000592078 USP17L22D6RA61 530 aa18.52■□□□□ 0.56
CXXC1-217ENST00000592078 USP17L17D6RBQ6 530 aa18.52■□□□□ 0.56
CXXC1-217ENST00000592078 USP17L19D6RCP7 530 aa18.52■□□□□ 0.56
CXXC1-217ENST00000592078 USP17L20D6RJB6 530 aa18.52■□□□□ 0.56
CXXC1-217ENST00000592078 SYN1P17600 705 aa18.52■□□□□ 0.56
CXXC1-217ENST00000592078 CHMLP26374 656 aa18.52■□□□□ 0.56
CXXC1-217ENST00000592078 USP17L24Q0WX57 530 aa18.52■□□□□ 0.56
CXXC1-217ENST00000592078 TRIM32Q13049 653 aa18.52■□□□□ 0.56
CXXC1-217ENST00000592078 MAP2K5Q13163 448 aa18.52■□□□□ 0.56
CXXC1-217ENST00000592078 LHX8Q68G74 356 aa18.52■□□□□ 0.56
CXXC1-217ENST00000592078 TGFBRAP1Q8WUH2 860 aa18.52■□□□□ 0.56
CXXC1-217ENST00000592078 AATFQ9NY61 560 aaKnown RBP eCLIP18.52■□□□□ 0.566e-6■■■■■ 54.7
CXXC1-217ENST00000592078 PRKAG2Q9UGJ0 569 aa18.52■□□□□ 0.56
CXXC1-217ENST00000592078 ZBTB21Q9ULJ3 1066 aa18.52■□□□□ 0.56
CXXC1-217ENST00000592078 IVNS1ABPQ9Y6Y0 642 aa18.52■□□□□ 0.56
CXXC1-217ENST00000592078 FLT1P17948 1338 aa18.51■□□□□ 0.55
CXXC1-217ENST00000592078 SLC15A5A6NIM6 579 aa18.51■□□□□ 0.55
CXXC1-217ENST00000592078 HIP1O00291 1037 aa18.51■□□□□ 0.55
CXXC1-217ENST00000592078 ZFYP08048 801 aaPredicted RBP18.51■□□□□ 0.55
CXXC1-217ENST00000592078 RRP1BQ14684 758 aaKnown RBP18.51■□□□□ 0.55
CXXC1-217ENST00000592078 UBE3CQ15386 1083 aa18.51■□□□□ 0.55
CXXC1-217ENST00000592078 LRRFIP1Q32MZ4 808 aaKnown RBP18.51■□□□□ 0.55
CXXC1-217ENST00000592078 LBX2Q6XYB7 198 aa18.51■□□□□ 0.55
CXXC1-217ENST00000592078 TXNRD2Q9NNW7 524 aa18.51■□□□□ 0.55
CXXC1-217ENST00000592078 RNF113AO15541 343 aaKnown RBP18.5■□□□□ 0.55
CXXC1-217ENST00000592078 CDC45O75419 566 aa18.5■□□□□ 0.55
CXXC1-217ENST00000592078 HOXC6P09630 235 aa18.5■□□□□ 0.55
CXXC1-217ENST00000592078 MAP3K12Q12852 859 aa18.5■□□□□ 0.55
CXXC1-217ENST00000592078 ZSCAN25Q6NSZ9 544 aa18.5■□□□□ 0.55
CXXC1-217ENST00000592078 TTC6Q86TZ1 520 aa18.5■□□□□ 0.55
CXXC1-217ENST00000592078 FSD1Q9BTV5 496 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms