RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 FAM110CQ1W6H9 321 aa16.7■□□□□ 0.26
CLIP3-205ENST00000592017 ABCB5Q2M3G0 1257 aa16.7■□□□□ 0.26
CLIP3-205ENST00000592017 PLEKHM2Q8IWE5 1019 aa16.7■□□□□ 0.26
CLIP3-205ENST00000592017 ACER1Q8TDN7 264 aa16.7■□□□□ 0.26
CLIP3-205ENST00000592017 RILPL2Q969X0 211 aa16.7■□□□□ 0.26
CLIP3-205ENST00000592017 STRBPQ96SI9 672 aaKnown RBP16.7■□□□□ 0.26
CLIP3-205ENST00000592017 SEC62Q99442 399 aaKnown RBP16.7■□□□□ 0.26
CLIP3-205ENST00000592017 MYH7P12883 1935 aa16.7■□□□□ 0.26
CLIP3-205ENST00000592017 SMIM22K7EJ46 135 aa16.69■□□□□ 0.26
CLIP3-205ENST00000592017 TNPO2O14787 897 aaKnown RBP16.69■□□□□ 0.26
CLIP3-205ENST00000592017 PEX10O60683 326 aa16.69■□□□□ 0.26
CLIP3-205ENST00000592017 FLT3LGP49771 235 aa16.69■□□□□ 0.26
CLIP3-205ENST00000592017 RAB3GAP1Q15042 981 aa16.69■□□□□ 0.26
CLIP3-205ENST00000592017 USP17L2Q6R6M4 530 aa16.69■□□□□ 0.26
CLIP3-205ENST00000592017 POTEEQ6S8J3 1075 aa16.69■□□□□ 0.26
CLIP3-205ENST00000592017 SLC44A5Q8NCS7 719 aa16.69■□□□□ 0.26
CLIP3-205ENST00000592017 MYH1P12882 1939 aa16.68■□□□□ 0.26
CLIP3-205ENST00000592017 USP17L12C9JPN9 530 aa16.68■□□□□ 0.26
CLIP3-205ENST00000592017 USP17L21D6R901 530 aa16.68■□□□□ 0.26
CLIP3-205ENST00000592017 APPP05067 770 aa16.68■□□□□ 0.26
CLIP3-205ENST00000592017 IRX3P78415 501 aaPredicted RBP16.68■□□□□ 0.26
CLIP3-205ENST00000592017 ZMYM1Q5SVZ6 1142 aa16.68■□□□□ 0.26
CLIP3-205ENST00000592017 DYNLL2Q96FJ2 89 aa16.68■□□□□ 0.26
CLIP3-205ENST00000592017 TXNRD2Q9NNW7 524 aa16.68■□□□□ 0.26
CLIP3-205ENST00000592017 MORF4L1Q9UBU8 362 aa16.68■□□□□ 0.26
CLIP3-205ENST00000592017 MPHOSPH10O00566 681 aaKnown RBP16.67■□□□□ 0.26
CLIP3-205ENST00000592017 GNAT2P19087 354 aa16.67■□□□□ 0.26
CLIP3-205ENST00000592017 TDO2P48775 406 aa16.67■□□□□ 0.26
CLIP3-205ENST00000592017 HERVK_113P62684 666 aa16.67■□□□□ 0.26
CLIP3-205ENST00000592017 SEPT2Q15019 361 aa16.67■□□□□ 0.26
CLIP3-205ENST00000592017 ZYXQ15942 572 aaKnown RBP16.67■□□□□ 0.26
CLIP3-205ENST00000592017 CTR9Q6PD62 1173 aa16.67■□□□□ 0.26
CLIP3-205ENST00000592017 C12orf42Q96LP6 360 aa16.67■□□□□ 0.26
CLIP3-205ENST00000592017 KIAA1683Q9H0B3 1180 aa16.67■□□□□ 0.26
CLIP3-205ENST00000592017 CABP5Q9NP86 173 aa16.67■□□□□ 0.26
CLIP3-205ENST00000592017 RBPJLQ9UBG7 517 aa16.67■□□□□ 0.26
CLIP3-205ENST00000592017 ARPP21Q9UBL0 812 aaPredicted RBP16.67■□□□□ 0.26
CLIP3-205ENST00000592017 PTPRFP10586 1907 aa16.66■□□□□ 0.26
CLIP3-205ENST00000592017 GSG1L2A8MUP6 293 aa16.66■□□□□ 0.26
CLIP3-205ENST00000592017 ADCY3O60266 1144 aa16.66■□□□□ 0.26
CLIP3-205ENST00000592017 ELNP15502 786 aa16.66■□□□□ 0.26
CLIP3-205ENST00000592017 IRF5Q13568 498 aa16.66■□□□□ 0.26
CLIP3-205ENST00000592017 C12orf60Q5U649 245 aa16.66■□□□□ 0.26
CLIP3-205ENST00000592017 CCDC129Q6ZRS4 1044 aa16.66■□□□□ 0.26
CLIP3-205ENST00000592017 STK11IPQ8N1F8 1099 aa16.66■□□□□ 0.26
CLIP3-205ENST00000592017 SLAIN1Q8ND83 568 aa16.66■□□□□ 0.26
CLIP3-205ENST00000592017 FEZ1Q99689 392 aa16.66■□□□□ 0.26
CLIP3-205ENST00000592017 EPB41L4AQ9HCS5 686 aaPredicted RBP16.66■□□□□ 0.26
CLIP3-205ENST00000592017 BIN2Q9UBW5 565 aaPredicted RBP16.66■□□□□ 0.26
CLIP3-205ENST00000592017 SWAP70Q9UH65 585 aa16.66■□□□□ 0.26
CLIP3-205ENST00000592017 GJD2Q9UKL4 321 aa16.66■□□□□ 0.26
CLIP3-205ENST00000592017 ATAD5Q96QE3 1844 aa16.66■□□□□ 0.26
CLIP3-205ENST00000592017 A0A1W2PRG0 241 aa16.65■□□□□ 0.26
CLIP3-205ENST00000592017 MINDY4BA8MYZ0 360 aa16.65■□□□□ 0.26
CLIP3-205ENST00000592017 CCL5P13501 91 aa16.65■□□□□ 0.26
CLIP3-205ENST00000592017 PDE4AP27815 886 aa16.65■□□□□ 0.26
CLIP3-205ENST00000592017 Q3C1V9 767 aa16.65■□□□□ 0.26
CLIP3-205ENST00000592017 COA7Q96BR5 231 aa16.65■□□□□ 0.26
CLIP3-205ENST00000592017 OSBPL3Q9H4L5 887 aa16.65■□□□□ 0.26
CLIP3-205ENST00000592017 LOC285556D6RIA3 1793 aa16.64■□□□□ 0.25
CLIP3-205ENST00000592017 USP17L15C9J2P7 530 aa16.64■□□□□ 0.25
CLIP3-205ENST00000592017 USP17L13C9JLJ4 530 aa16.64■□□□□ 0.25
CLIP3-205ENST00000592017 USP17L11C9JVI0 530 aa16.64■□□□□ 0.25
CLIP3-205ENST00000592017 USP17L18D6R9N7 530 aa16.64■□□□□ 0.25
CLIP3-205ENST00000592017 USP17L22D6RA61 530 aa16.64■□□□□ 0.25
CLIP3-205ENST00000592017 USP17L17D6RBQ6 530 aa16.64■□□□□ 0.25
CLIP3-205ENST00000592017 USP17L19D6RCP7 530 aa16.64■□□□□ 0.25
CLIP3-205ENST00000592017 USP17L20D6RJB6 530 aa16.64■□□□□ 0.25
CLIP3-205ENST00000592017 AKR1B1P15121 316 aa16.64■□□□□ 0.25
CLIP3-205ENST00000592017 USP17L24Q0WX57 530 aa16.64■□□□□ 0.25
CLIP3-205ENST00000592017 PRPF38BQ5VTL8 546 aaKnown RBP16.64■□□□□ 0.25
CLIP3-205ENST00000592017 SIAH1Q8IUQ4 282 aa16.64■□□□□ 0.25
CLIP3-205ENST00000592017 GPRC5AQ8NFJ5 357 aa16.64■□□□□ 0.25
CLIP3-205ENST00000592017 PXYLP1Q8TE99 480 aa16.64■□□□□ 0.25
CLIP3-205ENST00000592017 SHISA4Q96DD7 197 aa16.64■□□□□ 0.25
CLIP3-205ENST00000592017 FAM227BQ96M60 508 aa16.64■□□□□ 0.25
CLIP3-205ENST00000592017 NACAP1Q9BZK3 213 aa16.64■□□□□ 0.25
CLIP3-205ENST00000592017 UNC93B1Q9H1C4 597 aa16.64■□□□□ 0.25
CLIP3-205ENST00000592017 A0A0D9SFI3 127 aa16.63■□□□□ 0.25
CLIP3-205ENST00000592017 PATL2C9JE40 543 aaKnown RBP16.63■□□□□ 0.25
CLIP3-205ENST00000592017 INHAP05111 366 aa16.63■□□□□ 0.25
CLIP3-205ENST00000592017 GJB1P08034 283 aa16.63■□□□□ 0.25
CLIP3-205ENST00000592017 VCAM1P19320 739 aa16.63■□□□□ 0.25
CLIP3-205ENST00000592017 CDK8P49336 464 aa16.63■□□□□ 0.25
CLIP3-205ENST00000592017 USP14P54578 494 aa16.63■□□□□ 0.25
CLIP3-205ENST00000592017 NMIQ13287 307 aaPredicted RBP16.63■□□□□ 0.25
CLIP3-205ENST00000592017 GIMAP6Q6P9H5 292 aa16.63■□□□□ 0.25
CLIP3-205ENST00000592017 CATSPERGQ6ZRH7 1159 aa16.63■□□□□ 0.25
CLIP3-205ENST00000592017 C16orf86Q6ZW13 317 aa16.63■□□□□ 0.25
CLIP3-205ENST00000592017 RNF208Q9H0X6 261 aa16.63■□□□□ 0.25
CLIP3-205ENST00000592017 NAPBQ9H115 298 aa16.63■□□□□ 0.25
CLIP3-205ENST00000592017 TAOK2Q9UL54 1235 aa16.63■□□□□ 0.25
CLIP3-205ENST00000592017 CNMDO75829 334 aa16.62■□□□□ 0.25
CLIP3-205ENST00000592017 UBXN2AP68543 259 aa16.62■□□□□ 0.25
CLIP3-205ENST00000592017 SBK1Q52WX2 424 aa16.62■□□□□ 0.25
CLIP3-205ENST00000592017 KIAA1755Q5JYT7 1200 aa16.62■□□□□ 0.25
CLIP3-205ENST00000592017 TMEM179Q6ZVK1 233 aa16.62■□□□□ 0.25
CLIP3-205ENST00000592017 CLEC10AQ8IUN9 316 aa16.62■□□□□ 0.25
CLIP3-205ENST00000592017 IFNL3Q8IZI9 196 aa16.62■□□□□ 0.25
CLIP3-205ENST00000592017 PORCNQ9H237 461 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms