RNA–Protein interactions for RNA: ENST00000591960.1

RDH13-219, Transcript of retinol dehydrogenase 13, humanhuman

TSL 5

Gene RDH13, Length 1,328 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-219ENST00000591960 EMILIN3Q9NT22 766 aa16.31■□□□□ 0.2
RDH13-219ENST00000591960 TRIM17Q9Y577 477 aa16.31■□□□□ 0.2
RDH13-219ENST00000591960 A0A1W2PRG0 241 aa16.3■□□□□ 0.2
RDH13-219ENST00000591960 MINDY4BA8MYZ0 360 aa16.3■□□□□ 0.2
RDH13-219ENST00000591960 MPHOSPH10O00566 681 aaKnown RBP16.3■□□□□ 0.2
RDH13-219ENST00000591960 CAPN15O75808 1086 aa16.3■□□□□ 0.2
RDH13-219ENST00000591960 LACTBP83111 547 aaPredicted RBP16.3■□□□□ 0.2
RDH13-219ENST00000591960 TMEM179Q6ZVK1 233 aa16.3■□□□□ 0.2
RDH13-219ENST00000591960 CLEC10AQ8IUN9 316 aa16.3■□□□□ 0.2
RDH13-219ENST00000591960 STK11IPQ8N1F8 1099 aa16.3■□□□□ 0.2
RDH13-219ENST00000591960 TMOD4Q9NZQ9 345 aa16.3■□□□□ 0.2
RDH13-219ENST00000591960 GSPT1P15170 499 aaKnown RBP16.29■□□□□ 0.2
RDH13-219ENST00000591960 SDSP20132 328 aa16.29■□□□□ 0.2
RDH13-219ENST00000591960 RASA1P20936 1047 aa16.29■□□□□ 0.2
RDH13-219ENST00000591960 ZYXQ15942 572 aaKnown RBP16.29■□□□□ 0.2
RDH13-219ENST00000591960 PKN2Q16513 984 aaKnown RBP16.29■□□□□ 0.2
RDH13-219ENST00000591960 MCMDC2Q4G0Z9 681 aa16.29■□□□□ 0.2
RDH13-219ENST00000591960 USP17L2Q6R6M4 530 aa16.29■□□□□ 0.2
RDH13-219ENST00000591960 ZNF589Q86UQ0 364 aaPredicted RBP16.29■□□□□ 0.2
RDH13-219ENST00000591960 SIAH1Q8IUQ4 282 aa16.29■□□□□ 0.2
RDH13-219ENST00000591960 C12orf42Q96LP6 360 aa16.29■□□□□ 0.2
RDH13-219ENST00000591960 CCDC17Q96LX7 622 aa16.29■□□□□ 0.2
RDH13-219ENST00000591960 KIAA1683Q9H0B3 1180 aa16.29■□□□□ 0.2
RDH13-219ENST00000591960 ASCC2Q9H1I8 757 aaPredicted RBP16.29■□□□□ 0.2
RDH13-219ENST00000591960 EFCC1Q9HA90 598 aa16.29■□□□□ 0.2
RDH13-219ENST00000591960 MGAMO43451 1857 aa16.29■□□□□ 0.2
RDH13-219ENST00000591960 HOXA7P31268 230 aaPredicted RBP16.28■□□□□ 0.2
RDH13-219ENST00000591960 TTC22Q5TAA0 569 aa16.28■□□□□ 0.2
RDH13-219ENST00000591960 FBXO46Q6PJ61 603 aaPredicted RBP16.28■□□□□ 0.2
RDH13-219ENST00000591960 FEZ1Q99689 392 aa16.28■□□□□ 0.2
RDH13-219ENST00000591960 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.28■□□□□ 0.2
RDH13-219ENST00000591960 NACAP1Q9BZK3 213 aa16.28■□□□□ 0.2
RDH13-219ENST00000591960 PNMA3Q9UL41 463 aa16.28■□□□□ 0.2
RDH13-219ENST00000591960 ECM2O94769 699 aaPredicted RBP16.27■□□□□ 0.2
RDH13-219ENST00000591960 OSBPP22059 807 aa16.27■□□□□ 0.2
RDH13-219ENST00000591960 PABPC4Q13310 644 aaKnown RBP eCLIP16.27■□□□□ 0.25e-8■■■□□ 18.1
RDH13-219ENST00000591960 SMCR8Q8TEV9 937 aaPredicted RBP16.27■□□□□ 0.2
RDH13-219ENST00000591960 NAPBQ9H115 298 aa16.27■□□□□ 0.2
RDH13-219ENST00000591960 HPS5Q9UPZ3 1129 aa16.27■□□□□ 0.2
RDH13-219ENST00000591960 PTPN22Q9Y2R2 807 aa16.27■□□□□ 0.2
RDH13-219ENST00000591960 VCAM1P19320 739 aa16.26■□□□□ 0.19
RDH13-219ENST00000591960 USP14P54578 494 aa16.26■□□□□ 0.19
RDH13-219ENST00000591960 ICA1Q05084 483 aa16.26■□□□□ 0.19
RDH13-219ENST00000591960 PPARAQ07869 468 aa16.26■□□□□ 0.19
RDH13-219ENST00000591960 KIAA1755Q5JYT7 1200 aa16.26■□□□□ 0.19
RDH13-219ENST00000591960 POTEEQ6S8J3 1075 aa16.26■□□□□ 0.19
RDH13-219ENST00000591960 ANKRD13CQ8N6S4 541 aa16.26■□□□□ 0.19
RDH13-219ENST00000591960 TRIM47Q96LD4 638 aa16.26■□□□□ 0.19
RDH13-219ENST00000591960 P2RX7Q99572 595 aaKnown RBP16.26■□□□□ 0.19
RDH13-219ENST00000591960 TACC3Q9Y6A5 838 aa16.26■□□□□ 0.19
RDH13-219ENST00000591960 CCDC171Q6TFL3 1326 aa16.26■□□□□ 0.19
RDH13-219ENST00000591960 PRDM1O75626 825 aa16.25■□□□□ 0.19
RDH13-219ENST00000591960 HSPD1P10809 573 aaKnown RBP16.25■□□□□ 0.19
RDH13-219ENST00000591960 PSMC4P43686 418 aa16.25■□□□□ 0.19
RDH13-219ENST00000591960 KIF22Q14807 665 aa16.25■□□□□ 0.19
RDH13-219ENST00000591960 ALX1Q15699 326 aa16.25■□□□□ 0.19
RDH13-219ENST00000591960 MKNK2Q9HBH9 465 aa16.25■□□□□ 0.19
RDH13-219ENST00000591960 RLFQ13129 1914 aa16.25■□□□□ 0.19
RDH13-219ENST00000591960 CCDC85CA6NKD9 419 aa16.24■□□□□ 0.19
RDH13-219ENST00000591960 PEX10O60683 326 aa16.24■□□□□ 0.19
RDH13-219ENST00000591960 EEF2P13639 858 aaKnown RBP16.24■□□□□ 0.19
RDH13-219ENST00000591960 GCLCP48506 637 aaPredicted RBP16.24■□□□□ 0.19
RDH13-219ENST00000591960 HERVK_113P62684 666 aa16.24■□□□□ 0.19
RDH13-219ENST00000591960 IRX3P78415 501 aaPredicted RBP16.24■□□□□ 0.19
RDH13-219ENST00000591960 CTDSPL2Q05D32 466 aa16.24■□□□□ 0.19
RDH13-219ENST00000591960 FAM110CQ1W6H9 321 aa16.24■□□□□ 0.19
RDH13-219ENST00000591960 CWC27Q6UX04 472 aaKnown RBP16.24■□□□□ 0.19
RDH13-219ENST00000591960 SKAP1Q86WV1 359 aa16.24■□□□□ 0.19
RDH13-219ENST00000591960 IL25Q9H293 177 aa16.24■□□□□ 0.19
RDH13-219ENST00000591960 INCENPQ9NQS7 918 aa16.24■□□□□ 0.19
RDH13-219ENST00000591960 TMX2Q9Y320 296 aa16.24■□□□□ 0.19
RDH13-219ENST00000591960 IGKV6D-41A0A0C4DH26 115 aa16.23■□□□□ 0.19
RDH13-219ENST00000591960 FGAP02671 866 aa16.23■□□□□ 0.19
RDH13-219ENST00000591960 ARHGEF6Q15052 776 aa16.23■□□□□ 0.19
RDH13-219ENST00000591960 CATSPERGQ6ZRH7 1159 aa16.23■□□□□ 0.19
RDH13-219ENST00000591960 KANSL2Q9H9L4 492 aa16.23■□□□□ 0.19
RDH13-219ENST00000591960 ARHGEF10LQ9HCE6 1279 aa16.23■□□□□ 0.19
RDH13-219ENST00000591960 TXNRD2Q9NNW7 524 aa16.23■□□□□ 0.19
RDH13-219ENST00000591960 DIAPH3Q9NSV4 1193 aa16.23■□□□□ 0.19
RDH13-219ENST00000591960 ANAPC4Q9UJX5 808 aa16.23■□□□□ 0.19
RDH13-219ENST00000591960 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.23■□□□□ 0.19
RDH13-219ENST00000591960 PTCH2Q9Y6C5 1203 aa16.23■□□□□ 0.19
RDH13-219ENST00000591960 USP17L15C9J2P7 530 aa16.22■□□□□ 0.19
RDH13-219ENST00000591960 USP17L13C9JLJ4 530 aa16.22■□□□□ 0.19
RDH13-219ENST00000591960 USP17L11C9JVI0 530 aa16.22■□□□□ 0.19
RDH13-219ENST00000591960 USP17L18D6R9N7 530 aa16.22■□□□□ 0.19
RDH13-219ENST00000591960 USP17L22D6RA61 530 aa16.22■□□□□ 0.19
RDH13-219ENST00000591960 USP17L17D6RBQ6 530 aa16.22■□□□□ 0.19
RDH13-219ENST00000591960 USP17L19D6RCP7 530 aa16.22■□□□□ 0.19
RDH13-219ENST00000591960 USP17L20D6RJB6 530 aa16.22■□□□□ 0.19
RDH13-219ENST00000591960 HIP1O00291 1037 aa16.22■□□□□ 0.19
RDH13-219ENST00000591960 FMNL1O95466 1100 aaPredicted RBP16.22■□□□□ 0.19
RDH13-219ENST00000591960 GNRH1P01148 92 aa16.22■□□□□ 0.19
RDH13-219ENST00000591960 USP17L24Q0WX57 530 aa16.22■□□□□ 0.19
RDH13-219ENST00000591960 CENPQQ7L2Z9 268 aaPredicted RBP16.22■□□□□ 0.19
RDH13-219ENST00000591960 RPAP3Q9H6T3 665 aaPredicted RBP16.22■□□□□ 0.19
RDH13-219ENST00000591960 VCPKMTQ9H867 229 aa16.22■□□□□ 0.19
RDH13-219ENST00000591960 RBPJLQ9UBG7 517 aa16.22■□□□□ 0.19
RDH13-219ENST00000591960 MORF4L1Q9UBU8 362 aa16.22■□□□□ 0.19
RDH13-219ENST00000591960 ZMYM6O95789 1325 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 228.1 ms