RNA–Protein interactions for RNA: ENST00000591955.1

NPC1-213, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 561 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-213ENST00000591955 ATRNO75882 1429 aa6.89□□□□□ -1.31
NPC1-213ENST00000591955 LMTK2Q8IWU2 1503 aa6.89□□□□□ -1.31
NPC1-213ENST00000591955 GLI3P10071 1580 aa6.89□□□□□ -1.31
NPC1-213ENST00000591955 ABCC4O15439 1325 aa6.88□□□□□ -1.31
NPC1-213ENST00000591955 PHLPP2Q6ZVD8 1323 aa6.88□□□□□ -1.31
NPC1-213ENST00000591955 A6NNZ2 444 aa6.88□□□□□ -1.31
NPC1-213ENST00000591955 CPP00450 1065 aa6.88□□□□□ -1.31
NPC1-213ENST00000591955 ZSCAN22P10073 491 aaPredicted RBP6.88□□□□□ -1.31
NPC1-213ENST00000591955 HCLS1P14317 486 aaPredicted RBP6.88□□□□□ -1.31
NPC1-213ENST00000591955 FSTP19883 344 aa6.88□□□□□ -1.31
NPC1-213ENST00000591955 SSTR4P31391 388 aa6.88□□□□□ -1.31
NPC1-213ENST00000591955 IRAK1P51617 712 aa6.88□□□□□ -1.31
NPC1-213ENST00000591955 TUBB8Q3ZCM7 444 aa6.88□□□□□ -1.31
NPC1-213ENST00000591955 CCDC158Q5M9N0 1113 aa6.88□□□□□ -1.31
NPC1-213ENST00000591955 ZSCAN25Q6NSZ9 544 aa6.88□□□□□ -1.31
NPC1-213ENST00000591955 IGF2-ASQ6U949 168 aa6.88□□□□□ -1.31
NPC1-213ENST00000591955 DEFB132Q7Z7B7 95 aa6.88□□□□□ -1.31
NPC1-213ENST00000591955 SRLQ86TD4 932 aa6.88□□□□□ -1.31
NPC1-213ENST00000591955 PLA2G4DQ86XP0 818 aa6.88□□□□□ -1.31
NPC1-213ENST00000591955 DRC7Q8IY82 874 aa6.88□□□□□ -1.31
NPC1-213ENST00000591955 SSH1Q8WYL5 1049 aa6.88□□□□□ -1.31
NPC1-213ENST00000591955 ZSCAN31Q96LW9 406 aaPredicted RBP6.88□□□□□ -1.31
NPC1-213ENST00000591955 GSX2Q9BZM3 304 aa6.88□□□□□ -1.31
NPC1-213ENST00000591955 SCAND2PQ9GZW5 306 aaPredicted RBP6.88□□□□□ -1.31
NPC1-213ENST00000591955 DCTPP1Q9H773 170 aa6.88□□□□□ -1.31
NPC1-213ENST00000591955 SH2B1Q9NRF2 756 aaPredicted RBP6.88□□□□□ -1.31
NPC1-213ENST00000591955 NOB1Q9ULX3 412 aaKnown RBP6.88□□□□□ -1.31
NPC1-213ENST00000591955 PYCARDQ9ULZ3 195 aa6.88□□□□□ -1.31
NPC1-213ENST00000591955 EP400Q96L91 3159 aa6.88□□□□□ -1.31
NPC1-213ENST00000591955 CDC42BPGQ6DT37 1551 aa6.87□□□□□ -1.31
NPC1-213ENST00000591955 BCL9LQ86UU0 1499 aa6.87□□□□□ -1.31
NPC1-213ENST00000591955 PLEKHG2Q9H7P9 1386 aa6.87□□□□□ -1.31
NPC1-213ENST00000591955 NPHP3Q7Z494 1330 aa6.87□□□□□ -1.31
NPC1-213ENST00000591955 ERICH4A6NGS2 130 aa6.87□□□□□ -1.31
NPC1-213ENST00000591955 EFCAB8A8MWE9 144 aa6.87□□□□□ -1.31
NPC1-213ENST00000591955 TMCO5BA8MYB1 307 aa6.87□□□□□ -1.31
NPC1-213ENST00000591955 GOLGA6L19H0YKK7 550 aa6.87□□□□□ -1.31
NPC1-213ENST00000591955 ZBTB7BO15156 539 aaPredicted RBP6.87□□□□□ -1.31
NPC1-213ENST00000591955 MYO1BO43795 1136 aa6.87□□□□□ -1.31
NPC1-213ENST00000591955 PNMA6AP0CW24 399 aaPredicted RBP6.87□□□□□ -1.31
NPC1-213ENST00000591955 ERCC3P19447 782 aa6.87□□□□□ -1.31
NPC1-213ENST00000591955 ATP2B1P20020 1258 aa6.87□□□□□ -1.31
NPC1-213ENST00000591955 ACTN2P35609 894 aa6.87□□□□□ -1.31
NPC1-213ENST00000591955 ZNF75DP51815 510 aa6.87□□□□□ -1.31
NPC1-213ENST00000591955 EIF5P55010 431 aaKnown RBP6.87□□□□□ -1.31
NPC1-213ENST00000591955 MCTP2Q6DN12 878 aa6.87□□□□□ -1.31
NPC1-213ENST00000591955 FBXO38Q6PIJ6 1188 aa6.87□□□□□ -1.31
NPC1-213ENST00000591955 BTLAQ7Z6A9 289 aa6.87□□□□□ -1.31
NPC1-213ENST00000591955 USP48Q86UV5 1035 aa6.87□□□□□ -1.31
NPC1-213ENST00000591955 ERC1Q8IUD2 1116 aa6.87□□□□□ -1.31
NPC1-213ENST00000591955 PLEKHM2Q8IWE5 1019 aa6.87□□□□□ -1.31
NPC1-213ENST00000591955 CCDC191Q8NCU4 936 aa6.87□□□□□ -1.31
NPC1-213ENST00000591955 STAG1Q8WVM7 1258 aa6.87□□□□□ -1.31
NPC1-213ENST00000591955 UBXN4Q92575 508 aa6.87□□□□□ -1.31
NPC1-213ENST00000591955 CHMP4CQ96CF2 233 aa6.87□□□□□ -1.31
NPC1-213ENST00000591955 C16orf45Q96MC5 204 aaPredicted RBP6.87□□□□□ -1.31
NPC1-213ENST00000591955 GBP3Q9H0R5 595 aa6.87□□□□□ -1.31
NPC1-213ENST00000591955 NUP62CLQ9H1M0 184 aa6.87□□□□□ -1.31
NPC1-213ENST00000591955 KCNF1Q9H3M0 494 aa6.87□□□□□ -1.31
NPC1-213ENST00000591955 GDPD2Q9HCC8 539 aa6.87□□□□□ -1.31
NPC1-213ENST00000591955 BSDC1Q9NW68 430 aaPredicted RBP6.87□□□□□ -1.31
NPC1-213ENST00000591955 LRRFIP2Q9Y608 721 aaKnown RBP6.87□□□□□ -1.31
NPC1-213ENST00000591955 COL22A1Q8NFW1 1626 aaPredicted RBP6.87□□□□□ -1.31
NPC1-213ENST00000591955 TTC41PQ6P2S7 1318 aa6.86□□□□□ -1.31
NPC1-213ENST00000591955 SGSM2O43147 1006 aa6.86□□□□□ -1.31
NPC1-213ENST00000591955 ERLIN1O75477 346 aa6.86□□□□□ -1.31
NPC1-213ENST00000591955 SKIP12755 728 aa6.86□□□□□ -1.31
NPC1-213ENST00000591955 ATF3P18847 181 aa6.86□□□□□ -1.31
NPC1-213ENST00000591955 SSR1P43307 286 aaKnown RBP6.86□□□□□ -1.31
NPC1-213ENST00000591955 NEK4P51957 841 aa6.86□□□□□ -1.31
NPC1-213ENST00000591955 KRT85P78386 507 aa6.86□□□□□ -1.31
NPC1-213ENST00000591955 NCOA4Q13772 614 aa6.86□□□□□ -1.31
NPC1-213ENST00000591955 MMS22LQ6ZRQ5 1243 aa6.86□□□□□ -1.31
NPC1-213ENST00000591955 RBM43Q6ZSC3 357 aaKnown RBP6.86□□□□□ -1.31
NPC1-213ENST00000591955 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.86□□□□□ -1.31
NPC1-213ENST00000591955 RTF1Q92541 710 aaKnown RBP6.86□□□□□ -1.31
NPC1-213ENST00000591955 ERCC4Q92889 916 aaPredicted RBP6.86□□□□□ -1.31
NPC1-213ENST00000591955 NGLY1Q96IV0 654 aa6.86□□□□□ -1.31
NPC1-213ENST00000591955 UBXN6Q9BZV1 441 aa6.86□□□□□ -1.31
NPC1-213ENST00000591955 TRIM5Q9C035 493 aa6.86□□□□□ -1.31
NPC1-213ENST00000591955 NAT10Q9H0A0 1025 aaKnown RBP6.86□□□□□ -1.31
NPC1-213ENST00000591955 TSPAN10Q9H1Z9 355 aaPredicted RBP6.86□□□□□ -1.31
NPC1-213ENST00000591955 A1CFQ9NQ94 594 aaKnown RBP6.86□□□□□ -1.31
NPC1-213ENST00000591955 FRRS1LQ9P0K9 344 aa6.86□□□□□ -1.31
NPC1-213ENST00000591955 CLIP2Q9UDT6 1046 aa6.86□□□□□ -1.31
NPC1-213ENST00000591955 DNAI1Q9UI46 699 aa6.86□□□□□ -1.31
NPC1-213ENST00000591955 RRP15Q9Y3B9 282 aaKnown RBP6.86□□□□□ -1.31
NPC1-213ENST00000591955 NSD3Q9BZ95 1437 aa6.85□□□□□ -1.31
NPC1-213ENST00000591955 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.85□□□□□ -1.31
NPC1-213ENST00000591955 GOLGA6L4A6NEF3 574 aa6.85□□□□□ -1.31
NPC1-213ENST00000591955 U2SURPO15042 1029 aaKnown RBP6.85□□□□□ -1.31
NPC1-213ENST00000591955 ZRANB2O95218 330 aaKnown RBP eCLIP6.85□□□□□ -1.31
NPC1-213ENST00000591955 F13A1P00488 732 aa6.85□□□□□ -1.31
NPC1-213ENST00000591955 TAL1P17542 331 aaPredicted RBP6.85□□□□□ -1.31
NPC1-213ENST00000591955 LIG1P18858 919 aa6.85□□□□□ -1.31
NPC1-213ENST00000591955 ABL2P42684 1182 aa6.85□□□□□ -1.31
NPC1-213ENST00000591955 GSCP56915 257 aaPredicted RBP6.85□□□□□ -1.31
NPC1-213ENST00000591955 GNAI1P63096 354 aa6.85□□□□□ -1.31
NPC1-213ENST00000591955 EXOSC9Q06265 439 aaKnown RBP6.85□□□□□ -1.31
NPC1-213ENST00000591955 BRD3Q15059 726 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms