RNA–Protein interactions for RNA: ENST00000591515.6

LSM7-206, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM7, Length 710 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-206ENST00000591515 PPP4CP60510 307 aa27.83■■■□□ 2.05
LSM7-206ENST00000591515 ZNF384Q8TF68 577 aa27.83■■■□□ 2.05
LSM7-206ENST00000591515 EDC3Q96F86 508 aaKnown RBP27.83■■■□□ 2.05
LSM7-206ENST00000591515 VCANP13611 3396 aa27.82■■■□□ 2.04
LSM7-206ENST00000591515 FAM196BA6NMK8 535 aa27.82■■■□□ 2.04
LSM7-206ENST00000591515 TICAM2Q86XR7 235 aa27.82■■■□□ 2.04
LSM7-206ENST00000591515 EVI5LQ96CN4 794 aa27.82■■■□□ 2.04
LSM7-206ENST00000591515 SPP2Q13103 211 aa27.81■■■□□ 2.04
LSM7-206ENST00000591515 UBE3CQ15386 1083 aa27.81■■■□□ 2.04
LSM7-206ENST00000591515 FSD1Q9BTV5 496 aa27.81■■■□□ 2.04
LSM7-206ENST00000591515 AATFQ9NY61 560 aaKnown RBP eCLIP27.81■■■□□ 2.04
LSM7-206ENST00000591515 TBC1D12O60347 775 aa27.8■■■□□ 2.04
LSM7-206ENST00000591515 ADD2P35612 726 aa27.8■■■□□ 2.04
LSM7-206ENST00000591515 HMGCS2P54868 508 aa27.8■■■□□ 2.04
LSM7-206ENST00000591515 MAP3K21Q5TCX8 1036 aa27.8■■■□□ 2.04
LSM7-206ENST00000591515 TEX11Q8IYF3 940 aa27.8■■■□□ 2.04
LSM7-206ENST00000591515 ASCC2Q9H1I8 757 aaPredicted RBP27.8■■■□□ 2.04
LSM7-206ENST00000591515 ZNF532Q9HCE3 1301 aa27.8■■■□□ 2.04
LSM7-206ENST00000591515 SIPA1L1O43166 1804 aa27.8■■■□□ 2.04
LSM7-206ENST00000591515 MYO5AQ9Y4I1 1855 aaKnown RBP27.8■■■□□ 2.04
LSM7-206ENST00000591515 NPM3O75607 178 aaKnown RBP27.79■■■□□ 2.04
LSM7-206ENST00000591515 ZNF280CQ8ND82 737 aa27.79■■■□□ 2.04
LSM7-206ENST00000591515 COL2A1P02458 1487 aaPredicted RBP27.78■■■□□ 2.04
LSM7-206ENST00000591515 MAGEB6P1A0A0J9YX57 407 aa27.78■■■□□ 2.04
LSM7-206ENST00000591515 TRIM6-TRIM34B2RNG4 842 aa27.78■■■□□ 2.04
LSM7-206ENST00000591515 RHBDL3P58872 404 aa27.78■■■□□ 2.04
LSM7-206ENST00000591515 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.78■■■□□ 2.04
LSM7-206ENST00000591515 OSBPL5Q9H0X9 879 aaPredicted RBP27.78■■■□□ 2.04
LSM7-206ENST00000591515 MORF4L1Q9UBU8 362 aa27.78■■■□□ 2.04
LSM7-206ENST00000591515 LAMA2P24043 3122 aaKnown RBP27.77■■■□□ 2.04
LSM7-206ENST00000591515 MYH7P12883 1935 aa27.77■■■□□ 2.04
LSM7-206ENST00000591515 COL6A1P12109 1028 aa27.77■■■□□ 2.04
LSM7-206ENST00000591515 PRKAR2AP13861 404 aaKnown RBP27.77■■■□□ 2.04
LSM7-206ENST00000591515 CYP2B6P20813 491 aa27.77■■■□□ 2.04
LSM7-206ENST00000591515 PABPC4Q13310 644 aaKnown RBP eCLIP27.77■■■□□ 2.041e-14■■■■□ 25.1
LSM7-206ENST00000591515 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.77■■■□□ 2.04
LSM7-206ENST00000591515 RNF113AO15541 343 aaKnown RBP27.76■■■□□ 2.03
LSM7-206ENST00000591515 RRP1BQ14684 758 aaKnown RBP27.76■■■□□ 2.03
LSM7-206ENST00000591515 ADGRA1Q86SQ6 560 aa27.76■■■□□ 2.03
LSM7-206ENST00000591515 MIGA1Q8NAN2 632 aa27.76■■■□□ 2.03
LSM7-206ENST00000591515 PDE4AP27815 886 aa27.75■■■□□ 2.03
LSM7-206ENST00000591515 SH3RF3Q8TEJ3 882 aaPredicted RBP27.75■■■□□ 2.03
LSM7-206ENST00000591515 GUCD1Q96NT3 240 aa27.75■■■□□ 2.03
LSM7-206ENST00000591515 CRNKL1Q9BZJ0 848 aaKnown RBP27.75■■■□□ 2.03
LSM7-206ENST00000591515 CDK5RAP2Q96SN8 1893 aa27.74■■■□□ 2.03
LSM7-206ENST00000591515 EYSQ5T1H1 3165 aa27.74■■■□□ 2.03
LSM7-206ENST00000591515 TCRBV5S4A2TA0A5A2 114 aa27.74■■■□□ 2.03
LSM7-206ENST00000591515 PEX10O60683 326 aa27.74■■■□□ 2.03
LSM7-206ENST00000591515 LRRC26Q2I0M4 334 aa27.74■■■□□ 2.03
LSM7-206ENST00000591515 SH3D19Q5HYK7 790 aa27.74■■■□□ 2.03
LSM7-206ENST00000591515 APPBP2Q92624 585 aa27.74■■■□□ 2.03
LSM7-206ENST00000591515 RILPL2Q969X0 211 aa27.74■■■□□ 2.03
LSM7-206ENST00000591515 TBC1D2Q9BYX2 928 aa27.74■■■□□ 2.03
LSM7-206ENST00000591515 CAP2P40123 477 aa27.73■■■□□ 2.03
LSM7-206ENST00000591515 USP5P45974 858 aa27.73■■■□□ 2.03
LSM7-206ENST00000591515 MDM2Q00987 491 aaPredicted RBP27.73■■■□□ 2.03
LSM7-206ENST00000591515 SPTBN5Q9NRC6 3674 aaKnown RBP27.72■■■□□ 2.03
LSM7-206ENST00000591515 LTBP2Q14767 1821 aa27.72■■■□□ 2.03
LSM7-206ENST00000591515 DYNLL1P63167 89 aaKnown RBP27.72■■■□□ 2.03
LSM7-206ENST00000591515 DDRGK1Q96HY6 314 aa27.72■■■□□ 2.03
LSM7-206ENST00000591515 USP17L5A8MUK1 530 aa27.71■■■□□ 2.03
LSM7-206ENST00000591515 POTEB2H3BUK9 544 aa27.71■■■□□ 2.03
LSM7-206ENST00000591515 HIP1O00291 1037 aa27.71■■■□□ 2.03
LSM7-206ENST00000591515 XRCC5P13010 732 aaKnown RBP27.71■■■□□ 2.03
LSM7-206ENST00000591515 CACNB2Q08289 660 aaPredicted RBP27.71■■■□□ 2.03
LSM7-206ENST00000591515 TTC22Q5TAA0 569 aa27.71■■■□□ 2.03
LSM7-206ENST00000591515 DNAH12Q6ZR08 3092 aa27.71■■■□□ 2.03
LSM7-206ENST00000591515 NUDT12Q9BQG2 462 aa27.71■■■□□ 2.03
LSM7-206ENST00000591515 RIOK1Q9BRS2 568 aaKnown RBP27.71■■■□□ 2.03
LSM7-206ENST00000591515 TXNRD2Q9NNW7 524 aa27.71■■■□□ 2.03
LSM7-206ENST00000591515 LHX8Q68G74 356 aa27.7■■■□□ 2.02
LSM7-206ENST00000591515 FAM109BQ6ICB4 259 aaPredicted RBP27.7■■■□□ 2.02
LSM7-206ENST00000591515 TGFBRAP1Q8WUH2 860 aa27.7■■■□□ 2.02
LSM7-206ENST00000591515 SOCS4Q8WXH5 440 aa27.7■■■□□ 2.02
LSM7-206ENST00000591515 DHX36Q9H2U1 1008 aaKnown RBP27.7■■■□□ 2.02
LSM7-206ENST00000591515 FOCADQ5VW36 1801 aa27.69■■■□□ 2.02
LSM7-206ENST00000591515 MBD4O95243 580 aa27.69■■■□□ 2.02
LSM7-206ENST00000591515 ZKSCAN1P17029 563 aaPredicted RBP27.69■■■□□ 2.02
LSM7-206ENST00000591515 CCND3P30281 292 aaPredicted RBP27.69■■■□□ 2.02
LSM7-206ENST00000591515 IRX3P78415 501 aaPredicted RBP27.69■■■□□ 2.02
LSM7-206ENST00000591515 MTMR2Q13614 643 aa27.68■■■□□ 2.02
LSM7-206ENST00000591515 USP6NLQ92738 828 aa27.68■■■□□ 2.02
LSM7-206ENST00000591515 FAM161BQ96MY7 647 aa27.68■■■□□ 2.02
LSM7-206ENST00000591515 P2RX7Q99572 595 aaKnown RBP27.68■■■□□ 2.02
LSM7-206ENST00000591515 AS3MTQ9HBK9 375 aa27.68■■■□□ 2.02
LSM7-206ENST00000591515 FLT1P17948 1338 aa27.67■■■□□ 2.02
LSM7-206ENST00000591515 GNAT2P19087 354 aa27.67■■■□□ 2.02
LSM7-206ENST00000591515 CCL14Q16627 93 aa27.67■■■□□ 2.02
LSM7-206ENST00000591515 MAPKAPK5Q8IW41 473 aa27.67■■■□□ 2.02
LSM7-206ENST00000591515 CDH23Q9H251 3354 aa27.66■■■□□ 2.02
LSM7-206ENST00000591515 HLA-DOAP06340 250 aa27.66■■■□□ 2.02
LSM7-206ENST00000591515 HOXA7P31268 230 aaPredicted RBP27.66■■■□□ 2.02
LSM7-206ENST00000591515 HERVK_113P62684 666 aa27.66■■■□□ 2.02
LSM7-206ENST00000591515 AMOTL1Q8IY63 956 aa27.66■■■□□ 2.02
LSM7-206ENST00000591515 TRMT44Q8IYL2 757 aaKnown RBP27.66■■■□□ 2.02
LSM7-206ENST00000591515 LCORLQ8N3X6 602 aa27.66■■■□□ 2.02
LSM7-206ENST00000591515 GPRC5AQ8NFJ5 357 aa27.66■■■□□ 2.02
LSM7-206ENST00000591515 WDR18Q9BV38 432 aa27.66■■■□□ 2.02
LSM7-206ENST00000591515 ARMT1Q9H993 441 aa27.66■■■□□ 2.02
LSM7-206ENST00000591515 BACE1P56817 501 aa27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms