RNA–Protein interactions for RNA: ENST00000591416.5

MBD1-224, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene MBD1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-224ENST00000591416 EAPPQ56P03 285 aaPredicted RBP17.57■□□□□ 0.4
MBD1-224ENST00000591416 GALNT17Q6IS24 598 aa17.57■□□□□ 0.4
MBD1-224ENST00000591416 CCDC186Q7Z3E2 898 aa17.57■□□□□ 0.4
MBD1-224ENST00000591416 PAF1Q8N7H5 531 aa17.57■□□□□ 0.4
MBD1-224ENST00000591416 LMBRD1Q9NUN5 540 aa17.57■□□□□ 0.4
MBD1-224ENST00000591416 GOLGA8HP0CJ92 632 aa17.57■□□□□ 0.4
MBD1-224ENST00000591416 IRX3P78415 501 aaPredicted RBP17.57■□□□□ 0.4
MBD1-224ENST00000591416 CALCRLQ16602 461 aa17.57■□□□□ 0.4
MBD1-224ENST00000591416 MMRN2Q9H8L6 949 aa17.57■□□□□ 0.4
MBD1-224ENST00000591416 CD209Q9NNX6 404 aa17.57■□□□□ 0.4
MBD1-224ENST00000591416 PXDNLA1KZ92 1463 aa17.57■□□□□ 0.4
MBD1-224ENST00000591416 NT5C2P49902 561 aa17.57■□□□□ 0.4
MBD1-224ENST00000591416 BRIP1Q9BX63 1249 aa17.57■□□□□ 0.4
MBD1-224ENST00000591416 FRMPD2Q68DX3 1309 aaPredicted RBP17.57■□□□□ 0.4
MBD1-224ENST00000591416 C21orf2O43822 256 aa17.57■□□□□ 0.4
MBD1-224ENST00000591416 TNNT1P13805 278 aa17.57■□□□□ 0.4
MBD1-224ENST00000591416 SPECC1Q5M775 1068 aa17.57■□□□□ 0.4
MBD1-224ENST00000591416 GPATCH4Q5T3I0 446 aaKnown RBP17.57■□□□□ 0.4
MBD1-224ENST00000591416 SNX29Q8TEQ0 813 aa17.57■□□□□ 0.4
MBD1-224ENST00000591416 PIM2Q9P1W9 311 aa17.57■□□□□ 0.4
MBD1-224ENST00000591416 CHMP2AO43633 222 aa17.56■□□□□ 0.4
MBD1-224ENST00000591416 MYCLP12524 364 aaPredicted RBP17.56■□□□□ 0.4
MBD1-224ENST00000591416 RFX7Q2KHR2 1363 aa17.56■□□□□ 0.4
MBD1-224ENST00000591416 RNF26Q9BY78 433 aaPredicted RBP17.56■□□□□ 0.4
MBD1-224ENST00000591416 RIPOR2Q9Y4F9 1068 aa17.56■□□□□ 0.4
MBD1-224ENST00000591416 ITPK1Q13572 414 aa17.56■□□□□ 0.4
MBD1-224ENST00000591416 PDIA6Q15084 440 aa17.56■□□□□ 0.4
MBD1-224ENST00000591416 PODNQ7Z5L7 613 aa17.56■□□□□ 0.4
MBD1-224ENST00000591416 USP28Q96RU2 1077 aa17.56■□□□□ 0.4
MBD1-224ENST00000591416 ABCC12Q96J65 1359 aa17.56■□□□□ 0.4
MBD1-224ENST00000591416 DKC1O60832 514 aaKnown RBP eCLIP17.55■□□□□ 0.4
MBD1-224ENST00000591416 USP17L8P0C7I0 530 aa17.55■□□□□ 0.4
MBD1-224ENST00000591416 CASQ1P31415 396 aa17.55■□□□□ 0.4
MBD1-224ENST00000591416 CUL4AQ13619 759 aa17.55■□□□□ 0.4
MBD1-224ENST00000591416 LINC00116Q8NCU8 138 aa17.55■□□□□ 0.4
MBD1-224ENST00000591416 DCPSQ96C86 337 aaKnown RBP17.55■□□□□ 0.4
MBD1-224ENST00000591416 C16orf45Q96MC5 204 aaPredicted RBP17.55■□□□□ 0.4
MBD1-224ENST00000591416 HOMER2Q9NSB8 354 aa17.55■□□□□ 0.4
MBD1-224ENST00000591416 BTBD18B2RXH4 712 aa17.55■□□□□ 0.4
MBD1-224ENST00000591416 ADALQ6DHV7 355 aa17.55■□□□□ 0.4
MBD1-224ENST00000591416 PSTPIP2Q9H939 334 aa17.55■□□□□ 0.4
MBD1-224ENST00000591416 GADD45BO75293 160 aaPredicted RBP17.55■□□□□ 0.4
MBD1-224ENST00000591416 RPL13P26373 211 aaKnown RBP17.55■□□□□ 0.4
MBD1-224ENST00000591416 PRDX5P30044 214 aa17.55■□□□□ 0.4
MBD1-224ENST00000591416 PDE4DQ08499 809 aa17.55■□□□□ 0.4
MBD1-224ENST00000591416 SF3B3Q15393 1217 aaKnown RBP17.55■□□□□ 0.4
MBD1-224ENST00000591416 LUZP1Q86V48 1076 aa17.55■□□□□ 0.4
MBD1-224ENST00000591416 KANSL2Q9H9L4 492 aa17.55■□□□□ 0.4
MBD1-224ENST00000591416 BIN2Q9UBW5 565 aaPredicted RBP17.55■□□□□ 0.4
MBD1-224ENST00000591416 CIAPIN1Q6FI81 312 aa17.55■□□□□ 0.4
MBD1-224ENST00000591416 ATG9AQ7Z3C6 839 aa17.55■□□□□ 0.4
MBD1-224ENST00000591416 ZSWIM5Q9P217 1185 aa17.55■□□□□ 0.4
MBD1-224ENST00000591416 TTLL1O95922 423 aa17.54■□□□□ 0.4
MBD1-224ENST00000591416 LIFRP42702 1097 aa17.54■□□□□ 0.4
MBD1-224ENST00000591416 EN1Q05925 392 aaPredicted RBP17.54■□□□□ 0.4
MBD1-224ENST00000591416 PNMA2Q9UL42 364 aa17.54■□□□□ 0.4
MBD1-224ENST00000591416 MAP2P11137 1827 aaKnown RBP17.54■□□□□ 0.4
MBD1-224ENST00000591416 CYLC1P35663 651 aaPredicted RBP17.54■□□□□ 0.4
MBD1-224ENST00000591416 GRIPAP1Q4V328 841 aa17.54■□□□□ 0.4
MBD1-224ENST00000591416 ASPRV1Q53RT3 343 aa17.54■□□□□ 0.4
MBD1-224ENST00000591416 NCAPH2Q6IBW4 605 aa17.54■□□□□ 0.4
MBD1-224ENST00000591416 CNNM4Q6P4Q7 775 aa17.54■□□□□ 0.4
MBD1-224ENST00000591416 ALS2CR12Q96Q35 445 aa17.54■□□□□ 0.4
MBD1-224ENST00000591416 PI4KBQ9UBF8 816 aa17.54■□□□□ 0.4
MBD1-224ENST00000591416 MEGF6O75095 1541 aa17.54■□□□□ 0.4
MBD1-224ENST00000591416 FBXO11Q86XK2 927 aa17.54■□□□□ 0.4
MBD1-224ENST00000591416 NSUN7Q8NE18 718 aaKnown RBP17.54■□□□□ 0.4
MBD1-224ENST00000591416 SH2B2O14492 632 aaPredicted RBP17.54■□□□□ 0.4
MBD1-224ENST00000591416 SKILP12757 684 aa17.54■□□□□ 0.4
MBD1-224ENST00000591416 TBC1D5Q92609 795 aa17.54■□□□□ 0.4
MBD1-224ENST00000591416 CNTNAP4Q9C0A0 1308 aa17.54■□□□□ 0.4
MBD1-224ENST00000591416 UQCRHLA0A096LP55 91 aa17.53■□□□□ 0.4
MBD1-224ENST00000591416 UQCRHP07919 91 aa17.53■□□□□ 0.4
MBD1-224ENST00000591416 PAFAH1B1P43034 410 aa17.53■□□□□ 0.4
MBD1-224ENST00000591416 TNNT3P45378 269 aaPredicted RBP17.53■□□□□ 0.4
MBD1-224ENST00000591416 MRPL11Q9Y3B7 192 aaKnown RBP17.53■□□□□ 0.4
MBD1-224ENST00000591416 PHACTR2O75167 634 aa17.53■□□□□ 0.4
MBD1-224ENST00000591416 MLKLQ8NB16 471 aa17.53■□□□□ 0.4
MBD1-224ENST00000591416 TAOK3Q9H2K8 898 aa17.53■□□□□ 0.4
MBD1-224ENST00000591416 IFNKQ9P0W0 207 aa17.53■□□□□ 0.4
MBD1-224ENST00000591416 TMEM232C9JQI7 657 aa17.53■□□□□ 0.4
MBD1-224ENST00000591416 CD2BP2O95400 341 aaKnown RBP17.53■□□□□ 0.4
MBD1-224ENST00000591416 CSF1RP07333 972 aa17.53■□□□□ 0.4
MBD1-224ENST00000591416 GPKOWQ92917 476 aaPredicted RBP eCLIP17.53■□□□□ 0.4
MBD1-224ENST00000591416 CYP2D7A0A087X1C5 515 aa17.52■□□□□ 0.4
MBD1-224ENST00000591416 ECM2O94769 699 aaPredicted RBP17.52■□□□□ 0.4
MBD1-224ENST00000591416 SNW1Q13573 536 aaKnown RBP17.52■□□□□ 0.4
MBD1-224ENST00000591416 PKP1Q13835 747 aa17.52■□□□□ 0.4
MBD1-224ENST00000591416 SMIM5Q71RC9 77 aa17.52■□□□□ 0.4
MBD1-224ENST00000591416 CABP7Q86V35 215 aa17.52■□□□□ 0.4
MBD1-224ENST00000591416 ARHGEF35A5YM69 484 aa17.52■□□□□ 0.39
MBD1-224ENST00000591416 VTI1AQ96AJ9 217 aa17.52■□□□□ 0.39
MBD1-224ENST00000591416 COL3A1P02461 1466 aaPredicted RBP17.52■□□□□ 0.39
MBD1-224ENST00000591416 NCBP1Q09161 790 aaKnown RBP17.52■□□□□ 0.39
MBD1-224ENST00000591416 SP8Q8IXZ3 490 aa17.52■□□□□ 0.39
MBD1-224ENST00000591416 DNM3Q9UQ16 869 aa17.52■□□□□ 0.39
MBD1-224ENST00000591416 TRAF5O00463 557 aa17.51■□□□□ 0.39
MBD1-224ENST00000591416 IFNAR1P17181 557 aa17.51■□□□□ 0.39
MBD1-224ENST00000591416 INF2Q27J81 1249 aa17.51■□□□□ 0.39
MBD1-224ENST00000591416 NEK8Q86SG6 692 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms