RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 FKBP1AP62942 108 aaKnown RBP7.75□□□□□ -1.17
VPS4B-205ENST00000591383 CLDN10P78369 228 aa7.75□□□□□ -1.17
VPS4B-205ENST00000591383 CFAP100Q494V2 611 aa7.75□□□□□ -1.17
VPS4B-205ENST00000591383 ERICH6BQ5W0A0 696 aa7.75□□□□□ -1.17
VPS4B-205ENST00000591383 SPTY2D1Q68D10 685 aaPredicted RBP7.75□□□□□ -1.17
VPS4B-205ENST00000591383 SKAP1Q86WV1 359 aa7.75□□□□□ -1.17
VPS4B-205ENST00000591383 DPF2Q92785 391 aa7.75□□□□□ -1.17
VPS4B-205ENST00000591383 TEKT1Q969V4 418 aa7.75□□□□□ -1.17
VPS4B-205ENST00000591383 GMLQ99445 158 aa7.75□□□□□ -1.17
VPS4B-205ENST00000591383 TAF1DQ9H5J8 278 aaPredicted RBP7.75□□□□□ -1.17
VPS4B-205ENST00000591383 MYOZ2Q9NPC6 264 aa7.75□□□□□ -1.17
VPS4B-205ENST00000591383 PIH1D3Q9NQM4 214 aaKnown RBP7.75□□□□□ -1.17
VPS4B-205ENST00000591383 ADARB2Q9NS39 739 aaKnown RBP7.75□□□□□ -1.17
VPS4B-205ENST00000591383 PAG1Q9NWQ8 432 aa7.75□□□□□ -1.17
VPS4B-205ENST00000591383 GGA3Q9NZ52 723 aa7.75□□□□□ -1.17
VPS4B-205ENST00000591383 AOX1Q06278 1338 aa7.75□□□□□ -1.17
VPS4B-205ENST00000591383 SALL3Q9BXA9 1300 aa7.75□□□□□ -1.17
VPS4B-205ENST00000591383 SALL1Q9NSC2 1324 aa7.75□□□□□ -1.17
VPS4B-205ENST00000591383 CDK5RAP2Q96SN8 1893 aa7.75□□□□□ -1.17
VPS4B-205ENST00000591383 FOCADQ5VW36 1801 aa7.74□□□□□ -1.17
VPS4B-205ENST00000591383 CLRN2A0PK11 232 aa7.74□□□□□ -1.17
VPS4B-205ENST00000591383 SOWAHDA6NJG2 315 aa7.74□□□□□ -1.17
VPS4B-205ENST00000591383 GLRX3O76003 335 aaKnown RBP7.74□□□□□ -1.17
VPS4B-205ENST00000591383 CYP2E1P05181 493 aaPredicted RBP7.74□□□□□ -1.17
VPS4B-205ENST00000591383 CRKP46108 304 aa7.74□□□□□ -1.17
VPS4B-205ENST00000591383 RGS3P49796 1198 aa7.74□□□□□ -1.17
VPS4B-205ENST00000591383 PDE1AP54750 535 aa7.74□□□□□ -1.17
VPS4B-205ENST00000591383 ZNF280AP59817 542 aaPredicted RBP7.74□□□□□ -1.17
VPS4B-205ENST00000591383 MECOMQ03112 1051 aa7.74□□□□□ -1.17
VPS4B-205ENST00000591383 DLGAP5Q15398 846 aa7.74□□□□□ -1.17
VPS4B-205ENST00000591383 SWI5Q1ZZU3 235 aa7.74□□□□□ -1.17
VPS4B-205ENST00000591383 NAA16Q6N069 864 aaPredicted RBP7.74□□□□□ -1.17
VPS4B-205ENST00000591383 DNAJC14Q6Y2X3 702 aaPredicted RBP7.74□□□□□ -1.17
VPS4B-205ENST00000591383 PI4K2BQ8TCG2 481 aa7.74□□□□□ -1.17
VPS4B-205ENST00000591383 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.74□□□□□ -1.17
VPS4B-205ENST00000591383 WNT2BQ93097 391 aa7.74□□□□□ -1.17
VPS4B-205ENST00000591383 ZNF512BQ96KM6 892 aaPredicted RBP7.74□□□□□ -1.17
VPS4B-205ENST00000591383 HAUS7Q99871 368 aa7.74□□□□□ -1.17
VPS4B-205ENST00000591383 NOL10Q9BSC4 688 aaKnown RBP7.74□□□□□ -1.17
VPS4B-205ENST00000591383 FSD1Q9BTV5 496 aa7.74□□□□□ -1.17
VPS4B-205ENST00000591383 ANTXR1Q9H6X2 564 aa7.74□□□□□ -1.17
VPS4B-205ENST00000591383 VEZTQ9HBM0 779 aa7.74□□□□□ -1.17
VPS4B-205ENST00000591383 DNAAF2Q9NVR5 837 aaKnown RBP7.74□□□□□ -1.17
VPS4B-205ENST00000591383 PCDHAC2Q9Y5I4 1007 aa7.74□□□□□ -1.17
VPS4B-205ENST00000591383 MROH7-TTC4A0A0A0MT08 1334 aa7.74□□□□□ -1.17
VPS4B-205ENST00000591383 ASTN2O75129 1339 aaPredicted RBP7.74□□□□□ -1.17
VPS4B-205ENST00000591383 DDX60LQ5H9U9 1706 aaKnown RBP7.73□□□□□ -1.17
VPS4B-205ENST00000591383 RBM47A0AV96 593 aaKnown RBP7.73□□□□□ -1.17
VPS4B-205ENST00000591383 UNCXA6NJT0 531 aa7.73□□□□□ -1.17
VPS4B-205ENST00000591383 POTECB2RU33 542 aa7.73□□□□□ -1.17
VPS4B-205ENST00000591383 DKK1O94907 266 aa7.73□□□□□ -1.17
VPS4B-205ENST00000591383 SERPINB4P48594 390 aa7.73□□□□□ -1.17
VPS4B-205ENST00000591383 GSTO1P78417 241 aa7.73□□□□□ -1.17
VPS4B-205ENST00000591383 MAP3K12Q12852 859 aa7.73□□□□□ -1.17
VPS4B-205ENST00000591383 TTF1Q15361 905 aaPredicted RBP7.73□□□□□ -1.17
VPS4B-205ENST00000591383 USP50Q70EL3 339 aaPredicted RBP7.73□□□□□ -1.17
VPS4B-205ENST00000591383 SH3BP5LQ7L8J4 393 aa7.73□□□□□ -1.17
VPS4B-205ENST00000591383 ZBTB33Q86T24 672 aa7.73□□□□□ -1.17
VPS4B-205ENST00000591383 PNMA8AQ86V59 439 aaPredicted RBP7.73□□□□□ -1.17
VPS4B-205ENST00000591383 LDHDQ86WU2 507 aa7.73□□□□□ -1.17
VPS4B-205ENST00000591383 TRIM50Q86XT4 487 aa7.73□□□□□ -1.17
VPS4B-205ENST00000591383 MAGEB6Q8N7X4 407 aa7.73□□□□□ -1.17
VPS4B-205ENST00000591383 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.73□□□□□ -1.17
VPS4B-205ENST00000591383 WBP1LQ9NX94 342 aa7.73□□□□□ -1.17
VPS4B-205ENST00000591383 TMOD2Q9NZR1 351 aa7.73□□□□□ -1.17
VPS4B-205ENST00000591383 NOD1Q9Y239 953 aa7.73□□□□□ -1.17
VPS4B-205ENST00000591383 SUGT1Q9Y2Z0 365 aa7.73□□□□□ -1.17
VPS4B-205ENST00000591383 DAGLAQ9Y4D2 1042 aa7.73□□□□□ -1.17
VPS4B-205ENST00000591383 LAMB1P07942 1786 aa7.73□□□□□ -1.17
VPS4B-205ENST00000591383 MYO1BO43795 1136 aa7.72□□□□□ -1.17
VPS4B-205ENST00000591383 PDE6AP16499 860 aa7.72□□□□□ -1.17
VPS4B-205ENST00000591383 CYP7A1P22680 504 aa7.72□□□□□ -1.17
VPS4B-205ENST00000591383 SCNN1AP37088 669 aa7.72□□□□□ -1.17
VPS4B-205ENST00000591383 BTDP43251 543 aa7.72□□□□□ -1.17
VPS4B-205ENST00000591383 ATP1A2P50993 1020 aa7.72□□□□□ -1.17
VPS4B-205ENST00000591383 CACNB3P54284 484 aa7.72□□□□□ -1.17
VPS4B-205ENST00000591383 COPS2P61201 443 aa7.72□□□□□ -1.17
VPS4B-205ENST00000591383 NBPF9Q3BBW0 867 aa7.72□□□□□ -1.17
VPS4B-205ENST00000591383 ANGEL2Q5VTE6 544 aaKnown RBP7.72□□□□□ -1.17
VPS4B-205ENST00000591383 PTCRAQ6ISU1 281 aaPredicted RBP7.72□□□□□ -1.17
VPS4B-205ENST00000591383 MIGA1Q8NAN2 632 aa7.72□□□□□ -1.17
VPS4B-205ENST00000591383 RILPL2Q969X0 211 aa7.72□□□□□ -1.17
VPS4B-205ENST00000591383 UNC93B1Q9H1C4 597 aa7.72□□□□□ -1.17
VPS4B-205ENST00000591383 STAP2Q9UGK3 403 aa7.72□□□□□ -1.17
VPS4B-205ENST00000591383 SCAF8Q9UPN6 1271 aaKnown RBP7.72□□□□□ -1.17
VPS4B-205ENST00000591383 TRPM7Q96QT4 1865 aa7.72□□□□□ -1.17
VPS4B-205ENST00000591383 ADM5C9JUS6 153 aa7.71□□□□□ -1.18
VPS4B-205ENST00000591383 WNT10BO00744 389 aa7.71□□□□□ -1.18
VPS4B-205ENST00000591383 ERCC3P19447 782 aa7.71□□□□□ -1.18
VPS4B-205ENST00000591383 NOM1Q5C9Z4 860 aaKnown RBP7.71□□□□□ -1.18
VPS4B-205ENST00000591383 TTC22Q5TAA0 569 aa7.71□□□□□ -1.18
VPS4B-205ENST00000591383 SLC9C2Q5TAH2 1124 aa7.71□□□□□ -1.18
VPS4B-205ENST00000591383 MAP1SQ66K74 1059 aaPredicted RBP7.71□□□□□ -1.18
VPS4B-205ENST00000591383 APOBEC3FQ8IUX4 373 aaKnown RBP7.71□□□□□ -1.18
VPS4B-205ENST00000591383 CNTROBQ8N137 903 aa7.71□□□□□ -1.18
VPS4B-205ENST00000591383 KBTBD3Q8NAB2 608 aa7.71□□□□□ -1.18
VPS4B-205ENST00000591383 C1orf216Q8TAB5 229 aa7.71□□□□□ -1.18
VPS4B-205ENST00000591383 DCPSQ96C86 337 aaKnown RBP7.71□□□□□ -1.18
VPS4B-205ENST00000591383 NSUN4Q96CB9 384 aaKnown RBP7.71□□□□□ -1.18
VPS4B-205ENST00000591383 ZDHHC15Q96MV8 337 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms