RNA–Protein interactions for RNA: ENST00000590934.1

TMC6-217, Transcript of transmembrane channel like 6, humanhuman

TSL 5

Gene TMC6, Length 386 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-217ENST00000590934 SLC26A6Q9BXS9 759 aa13.51□□□□□ -0.25
TMC6-217ENST00000590934 ZNF277Q9NRM2 450 aaPredicted RBP13.51□□□□□ -0.25
TMC6-217ENST00000590934 CFAP45Q9UL16 551 aa13.51□□□□□ -0.25
TMC6-217ENST00000590934 BAZ2AQ9UIF9 1905 aaKnown RBP13.51□□□□□ -0.25
TMC6-217ENST00000590934 COL4A5P29400 1685 aa13.5□□□□□ -0.25
TMC6-217ENST00000590934 LTBP3Q9NS15 1303 aa13.5□□□□□ -0.25
TMC6-217ENST00000590934 FSD2A1L4K1 749 aa13.5□□□□□ -0.25
TMC6-217ENST00000590934 GLTPD2A6NH11 291 aa13.5□□□□□ -0.25
TMC6-217ENST00000590934 NFKBIEO00221 500 aa13.5□□□□□ -0.25
TMC6-217ENST00000590934 GADD45BO75293 160 aaPredicted RBP13.5□□□□□ -0.25
TMC6-217ENST00000590934 DEKP35659 375 aaKnown RBP13.5□□□□□ -0.25
TMC6-217ENST00000590934 ZNF445P59923 1031 aa13.5□□□□□ -0.25
TMC6-217ENST00000590934 KIF23Q02241 960 aaPredicted RBP13.5□□□□□ -0.25
TMC6-217ENST00000590934 SLC4A8Q2Y0W8 1093 aa13.5□□□□□ -0.25
TMC6-217ENST00000590934 FAM173BQ6P4H8 233 aa13.5□□□□□ -0.25
TMC6-217ENST00000590934 LEO1Q8WVC0 666 aaPredicted RBP13.5□□□□□ -0.25
TMC6-217ENST00000590934 GZF1Q9H116 711 aaPredicted RBP13.5□□□□□ -0.25
TMC6-217ENST00000590934 DHX36Q9H2U1 1008 aaKnown RBP13.5□□□□□ -0.25
TMC6-217ENST00000590934 KAT14Q9H8E8 782 aa13.5□□□□□ -0.25
TMC6-217ENST00000590934 ZNRF3Q9ULT6 936 aa13.5□□□□□ -0.25
TMC6-217ENST00000590934 FOCADQ5VW36 1801 aa13.5□□□□□ -0.25
TMC6-217ENST00000590934 IGKV6D-41A0A0C4DH26 115 aa13.49□□□□□ -0.25
TMC6-217ENST00000590934 POTECB2RU33 542 aa13.49□□□□□ -0.25
TMC6-217ENST00000590934 PRPF3O43395 683 aaKnown RBP13.49□□□□□ -0.25
TMC6-217ENST00000590934 PPFIA3O75145 1194 aa13.49□□□□□ -0.25
TMC6-217ENST00000590934 HLA-DOAP06340 250 aa13.49□□□□□ -0.25
TMC6-217ENST00000590934 VEGFAP15692 232 aaPredicted RBP13.49□□□□□ -0.25
TMC6-217ENST00000590934 KIF5BP33176 963 aa13.49□□□□□ -0.25
TMC6-217ENST00000590934 MMP14P50281 582 aa13.49□□□□□ -0.25
TMC6-217ENST00000590934 GUCY1B3Q02153 619 aa13.49□□□□□ -0.25
TMC6-217ENST00000590934 PICALMQ13492 652 aa13.49□□□□□ -0.25
TMC6-217ENST00000590934 TRIM29Q14134 588 aa13.49□□□□□ -0.25
TMC6-217ENST00000590934 KRT40Q6A162 431 aa13.49□□□□□ -0.25
TMC6-217ENST00000590934 NIM1KQ8IY84 436 aa13.49□□□□□ -0.25
TMC6-217ENST00000590934 AGBL3Q8NEM8 1001 aa13.49□□□□□ -0.25
TMC6-217ENST00000590934 CTCFLQ8NI51 663 aaPredicted RBP13.49□□□□□ -0.25
TMC6-217ENST00000590934 SYAP1Q96A49 352 aaPredicted RBP13.49□□□□□ -0.25
TMC6-217ENST00000590934 SERPINB13Q9UIV8 391 aa13.49□□□□□ -0.25
TMC6-217ENST00000590934 SCN9AQ15858 1988 aa13.49□□□□□ -0.25
TMC6-217ENST00000590934 ATRNL1Q5VV63 1379 aa13.48□□□□□ -0.25
TMC6-217ENST00000590934 PSMD14O00487 310 aa13.48□□□□□ -0.25
TMC6-217ENST00000590934 ENTPD3O75355 529 aa13.48□□□□□ -0.25
TMC6-217ENST00000590934 U2AF2P26368 475 aaKnown RBP eCLIP13.48□□□□□ -0.25
TMC6-217ENST00000590934 GNAQP50148 359 aa13.48□□□□□ -0.25
TMC6-217ENST00000590934 FOSBP53539 338 aa13.48□□□□□ -0.25
TMC6-217ENST00000590934 NFIAQ12857 509 aa13.48□□□□□ -0.25
TMC6-217ENST00000590934 GRM4Q14833 912 aa13.48□□□□□ -0.25
TMC6-217ENST00000590934 CFAP100Q494V2 611 aa13.48□□□□□ -0.25
TMC6-217ENST00000590934 OTUD7BQ6GQQ9 843 aa13.48□□□□□ -0.25
TMC6-217ENST00000590934 CAVIN1Q6NZI2 390 aaKnown RBP13.48□□□□□ -0.25
TMC6-217ENST00000590934 METTL16Q86W50 562 aaKnown RBP13.48□□□□□ -0.25
TMC6-217ENST00000590934 MTMR14Q8NCE2 650 aa13.48□□□□□ -0.25
TMC6-217ENST00000590934 PNMA1Q8ND90 353 aa13.48□□□□□ -0.25
TMC6-217ENST00000590934 SPATA32Q96LK8 384 aa13.48□□□□□ -0.25
TMC6-217ENST00000590934 AIFM3Q96NN9 605 aa13.48□□□□□ -0.25
TMC6-217ENST00000590934 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.48□□□□□ -0.25
TMC6-217ENST00000590934 TAOK3Q9H2K8 898 aa13.48□□□□□ -0.25
TMC6-217ENST00000590934 RTEL1Q9NZ71 1219 aa13.48□□□□□ -0.25
TMC6-217ENST00000590934 RBM27Q9P2N5 1060 aaKnown RBP13.48□□□□□ -0.25
TMC6-217ENST00000590934 FAM198AQ9UFP1 575 aa13.48□□□□□ -0.25
TMC6-217ENST00000590934 RCOR1Q9UKL0 485 aa13.48□□□□□ -0.25
TMC6-217ENST00000590934 CNTNAP5Q8WYK1 1306 aa13.47□□□□□ -0.25
TMC6-217ENST00000590934 ZC3H4Q9UPT8 1303 aaKnown RBP13.47□□□□□ -0.25
TMC6-217ENST00000590934 FER1L6Q2WGJ9 1857 aa13.47□□□□□ -0.25
TMC6-217ENST00000590934 CDK5RAP2Q96SN8 1893 aa13.47□□□□□ -0.25
TMC6-217ENST00000590934 PLEKHA8P1O95397 391 aa13.47□□□□□ -0.25
TMC6-217ENST00000590934 MMP1P03956 469 aa13.47□□□□□ -0.25
TMC6-217ENST00000590934 TOP1P11387 765 aaKnown RBP13.47□□□□□ -0.25
TMC6-217ENST00000590934 GUCY1A2P33402 732 aa13.47□□□□□ -0.25
TMC6-217ENST00000590934 SHMT1P34896 483 aa13.47□□□□□ -0.25
TMC6-217ENST00000590934 PKN1Q16512 942 aa13.47□□□□□ -0.25
TMC6-217ENST00000590934 ZSCAN23Q3MJ62 389 aa13.47□□□□□ -0.25
TMC6-217ENST00000590934 PPP4R3BQ5MIZ7 849 aa13.47□□□□□ -0.25
TMC6-217ENST00000590934 TMEM47Q9BQJ4 181 aa13.47□□□□□ -0.25
TMC6-217ENST00000590934 LZTS2Q9BRK4 669 aa13.47□□□□□ -0.25
TMC6-217ENST00000590934 POLR3EQ9NVU0 708 aa13.47□□□□□ -0.25
TMC6-217ENST00000590934 TMEM63CQ9P1W3 806 aa13.47□□□□□ -0.25
TMC6-217ENST00000590934 HDAC9Q9UKV0 1011 aa13.47□□□□□ -0.25
TMC6-217ENST00000590934 PCDHAC2Q9Y5I4 1007 aa13.47□□□□□ -0.25
TMC6-217ENST00000590934 DICER1Q9UPY3 1922 aaKnown RBP13.47□□□□□ -0.25
TMC6-217ENST00000590934 PSME4Q14997 1843 aa13.46□□□□□ -0.25
TMC6-217ENST00000590934 ADAMTSL1Q8N6G6 1762 aa13.46□□□□□ -0.25
TMC6-217ENST00000590934 SPDYE2BA6NHP3 402 aa13.46□□□□□ -0.25
TMC6-217ENST00000590934 KIF28PB7ZC32 967 aa13.46□□□□□ -0.25
TMC6-217ENST00000590934 RAD17O75943 681 aa13.46□□□□□ -0.25
TMC6-217ENST00000590934 YEATS4O95619 227 aa13.46□□□□□ -0.25
TMC6-217ENST00000590934 SPDYE6P0CI01 402 aa13.46□□□□□ -0.25
TMC6-217ENST00000590934 NASPP49321 788 aaPredicted RBP13.46□□□□□ -0.25
TMC6-217ENST00000590934 RBM5P52756 815 aaKnown RBP eCLIP13.46□□□□□ -0.252e-8■□□□□ 9.8
TMC6-217ENST00000590934 AKAP17AQ02040 695 aaKnown RBP13.46□□□□□ -0.25
TMC6-217ENST00000590934 MYSM1Q5VVJ2 828 aa13.46□□□□□ -0.25
TMC6-217ENST00000590934 FAM177A1Q8N128 213 aaPredicted RBP13.46□□□□□ -0.25
TMC6-217ENST00000590934 SRBD1Q8N5C6 995 aaKnown RBP13.46□□□□□ -0.25
TMC6-217ENST00000590934 CCDC17Q96LX7 622 aa13.46□□□□□ -0.25
TMC6-217ENST00000590934 USP28Q96RU2 1077 aa13.46□□□□□ -0.25
TMC6-217ENST00000590934 FOXP1Q9H334 677 aaPredicted RBP13.46□□□□□ -0.25
TMC6-217ENST00000590934 GJB4Q9NTQ9 266 aa13.46□□□□□ -0.25
TMC6-217ENST00000590934 TFIP11Q9UBB9 837 aaKnown RBP13.46□□□□□ -0.25
TMC6-217ENST00000590934 PI4KBQ9UBF8 816 aa13.46□□□□□ -0.25
TMC6-217ENST00000590934 PALM3A6NDB9 673 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms