RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 SLC9C2Q5TAH2 1124 aa21.65■■□□□ 1.06
VAT1-208ENST00000590924 B4GALNT3Q6L9W6 998 aa21.65■■□□□ 1.06
VAT1-208ENST00000590924 GPRC5AQ8NFJ5 357 aa21.65■■□□□ 1.06
VAT1-208ENST00000590924 DEFB118Q96PH6 123 aa21.65■■□□□ 1.06
VAT1-208ENST00000590924 TXNRD2Q9NNW7 524 aa21.65■■□□□ 1.06
VAT1-208ENST00000590924 ECHDC1Q9NTX5 307 aa21.65■■□□□ 1.06
VAT1-208ENST00000590924 RLFQ13129 1914 aa21.65■■□□□ 1.06
VAT1-208ENST00000590924 TTC41PQ6P2S7 1318 aa21.64■■□□□ 1.05
VAT1-208ENST00000590924 PLCD1P51178 756 aa21.64■■□□□ 1.05
VAT1-208ENST00000590924 CERKLQ49MI3 558 aaPredicted RBP21.64■■□□□ 1.05
VAT1-208ENST00000590924 DPF3Q92784 378 aa21.64■■□□□ 1.05
VAT1-208ENST00000590924 DNAJC2Q99543 621 aaKnown RBP21.64■■□□□ 1.05
VAT1-208ENST00000590924 CRNKL1Q9BZJ0 848 aaKnown RBP21.64■■□□□ 1.05
VAT1-208ENST00000590924 CRISPLD2Q9H0B8 497 aa21.64■■□□□ 1.05
VAT1-208ENST00000590924 COLQQ9Y215 455 aaPredicted RBP21.64■■□□□ 1.05
VAT1-208ENST00000590924 ZNF532Q9HCE3 1301 aa21.63■■□□□ 1.05
VAT1-208ENST00000590924 TCRBV5S4A2TA0A5A2 114 aa21.63■■□□□ 1.05
VAT1-208ENST00000590924 GOLIM4O00461 696 aa21.63■■□□□ 1.05
VAT1-208ENST00000590924 SHMT1P34896 483 aa21.63■■□□□ 1.05
VAT1-208ENST00000590924 GABPAQ06546 454 aa21.63■■□□□ 1.05
VAT1-208ENST00000590924 ABCB5Q2M3G0 1257 aa21.63■■□□□ 1.05
VAT1-208ENST00000590924 SOCS4Q8WXH5 440 aa21.63■■□□□ 1.05
VAT1-208ENST00000590924 FEZ1Q99689 392 aa21.63■■□□□ 1.05
VAT1-208ENST00000590924 KIAA1683Q9H0B3 1180 aa21.63■■□□□ 1.05
VAT1-208ENST00000590924 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.63■■□□□ 1.05
VAT1-208ENST00000590924 RBPJLQ9UBG7 517 aa21.63■■□□□ 1.05
VAT1-208ENST00000590924 SALL3Q9BXA9 1300 aa21.62■■□□□ 1.05
VAT1-208ENST00000590924 PEX10O60683 326 aa21.62■■□□□ 1.05
VAT1-208ENST00000590924 TFRCP02786 760 aaKnown RBP21.62■■□□□ 1.05
VAT1-208ENST00000590924 POLR3DP05423 398 aaPredicted RBP21.62■■□□□ 1.05
VAT1-208ENST00000590924 MAPK4P31152 587 aa21.62■■□□□ 1.05
VAT1-208ENST00000590924 USP14P54578 494 aa21.62■■□□□ 1.05
VAT1-208ENST00000590924 ERVK-9P63128 1117 aa21.62■■□□□ 1.05
VAT1-208ENST00000590924 ERVK-24P63145 666 aa21.62■■□□□ 1.05
VAT1-208ENST00000590924 LNPKQ9C0E8 428 aa21.62■■□□□ 1.05
VAT1-208ENST00000590924 BCL11AQ9H165 835 aa21.62■■□□□ 1.05
VAT1-208ENST00000590924 STAP2Q9UGK3 403 aa21.62■■□□□ 1.05
VAT1-208ENST00000590924 RPTORQ8N122 1335 aa21.61■■□□□ 1.05
VAT1-208ENST00000590924 A0A0G2JMZ2 1700 aa21.61■■□□□ 1.05
VAT1-208ENST00000590924 RAB3GAP1Q15042 981 aa21.61■■□□□ 1.05
VAT1-208ENST00000590924 ZYXQ15942 572 aaKnown RBP21.61■■□□□ 1.05
VAT1-208ENST00000590924 POTEEQ6S8J3 1075 aa21.61■■□□□ 1.05
VAT1-208ENST00000590924 TRIB2Q92519 343 aa21.61■■□□□ 1.05
VAT1-208ENST00000590924 NUDT12Q9BQG2 462 aa21.61■■□□□ 1.05
VAT1-208ENST00000590924 CABP5Q9NP86 173 aa21.61■■□□□ 1.05
VAT1-208ENST00000590924 USP17L15C9J2P7 530 aa21.6■■□□□ 1.05
VAT1-208ENST00000590924 USP17L13C9JLJ4 530 aa21.6■■□□□ 1.05
VAT1-208ENST00000590924 USP17L11C9JVI0 530 aa21.6■■□□□ 1.05
VAT1-208ENST00000590924 USP17L18D6R9N7 530 aa21.6■■□□□ 1.05
VAT1-208ENST00000590924 USP17L22D6RA61 530 aa21.6■■□□□ 1.05
VAT1-208ENST00000590924 USP17L17D6RBQ6 530 aa21.6■■□□□ 1.05
VAT1-208ENST00000590924 USP17L19D6RCP7 530 aa21.6■■□□□ 1.05
VAT1-208ENST00000590924 USP17L20D6RJB6 530 aa21.6■■□□□ 1.05
VAT1-208ENST00000590924 ERC2O15083 957 aa21.6■■□□□ 1.05
VAT1-208ENST00000590924 XRCC5P13010 732 aaKnown RBP21.6■■□□□ 1.05
VAT1-208ENST00000590924 MX1P20591 662 aa21.6■■□□□ 1.05
VAT1-208ENST00000590924 FXR1P51114 621 aaKnown RBP eCLIP21.6■■□□□ 1.05
VAT1-208ENST00000590924 USP17L24Q0WX57 530 aa21.6■■□□□ 1.05
VAT1-208ENST00000590924 LCORLQ8N3X6 602 aa21.6■■□□□ 1.05
VAT1-208ENST00000590924 EDC3Q96F86 508 aaKnown RBP21.6■■□□□ 1.05
VAT1-208ENST00000590924 PAGR1Q9BTK6 254 aa21.6■■□□□ 1.05
VAT1-208ENST00000590924 PORCNQ9H237 461 aa21.6■■□□□ 1.05
VAT1-208ENST00000590924 HMX1Q9NP08 348 aaPredicted RBP21.6■■□□□ 1.05
VAT1-208ENST00000590924 DCP1AQ9NPI6 582 aaPredicted RBP21.6■■□□□ 1.05
VAT1-208ENST00000590924 PAG1Q9NWQ8 432 aa21.6■■□□□ 1.05
VAT1-208ENST00000590924 MCM9Q9NXL9 1143 aa21.6■■□□□ 1.05
VAT1-208ENST00000590924 VCAM1P19320 739 aa21.59■■□□□ 1.05
VAT1-208ENST00000590924 CYP2B6P20813 491 aa21.59■■□□□ 1.05
VAT1-208ENST00000590924 ADD2P35612 726 aa21.59■■□□□ 1.05
VAT1-208ENST00000590924 Q3C1V9 767 aa21.59■■□□□ 1.05
VAT1-208ENST00000590924 ACER1Q8TDN7 264 aa21.59■■□□□ 1.05
VAT1-208ENST00000590924 SDR42E1Q8WUS8 393 aa21.59■■□□□ 1.05
VAT1-208ENST00000590924 HAUS7Q99871 368 aa21.59■■□□□ 1.05
VAT1-208ENST00000590924 NR2E3Q9Y5X4 410 aa21.59■■□□□ 1.05
VAT1-208ENST00000590924 ZNFX1Q9P2E3 1918 aaKnown RBP21.59■■□□□ 1.05
VAT1-208ENST00000590924 COL11A1P12107 1806 aaPredicted RBP21.58■■□□□ 1.05
VAT1-208ENST00000590924 ZNF236Q9UL36 1845 aa21.58■■□□□ 1.05
VAT1-208ENST00000590924 GLRX3O76003 335 aaKnown RBP21.58■■□□□ 1.05
VAT1-208ENST00000590924 GUCY1A2P33402 732 aa21.58■■□□□ 1.05
VAT1-208ENST00000590924 TRIM32Q13049 653 aa21.58■■□□□ 1.05
VAT1-208ENST00000590924 LBX2Q6XYB7 198 aa21.58■■□□□ 1.05
VAT1-208ENST00000590924 CATSPERGQ6ZRH7 1159 aa21.58■■□□□ 1.05
VAT1-208ENST00000590924 GPR142Q7Z601 462 aa21.58■■□□□ 1.05
VAT1-208ENST00000590924 CCAR1Q8IX12 1150 aaKnown RBP21.58■■□□□ 1.05
VAT1-208ENST00000590924 ANKLE1Q8NAG6 615 aa21.58■■□□□ 1.05
VAT1-208ENST00000590924 USP6NLQ92738 828 aa21.58■■□□□ 1.05
VAT1-208ENST00000590924 BOLA2Q9H3K6 86 aa21.58■■□□□ 1.05
VAT1-208ENST00000590924 OSBPL3Q9H4L5 887 aa21.58■■□□□ 1.05
VAT1-208ENST00000590924 RABGAP1Q9Y3P9 1069 aa21.58■■□□□ 1.05
VAT1-208ENST00000590924 PDE1AP54750 535 aa21.57■■□□□ 1.04
VAT1-208ENST00000590924 EVX2Q03828 476 aa21.57■■□□□ 1.04
VAT1-208ENST00000590924 MAP3K21Q5TCX8 1036 aa21.57■■□□□ 1.04
VAT1-208ENST00000590924 CHRDL2Q6WN34 429 aa21.57■■□□□ 1.04
VAT1-208ENST00000590924 TRMT44Q8IYL2 757 aaKnown RBP21.57■■□□□ 1.04
VAT1-208ENST00000590924 OTUD7AQ8TE49 926 aaPredicted RBP21.57■■□□□ 1.04
VAT1-208ENST00000590924 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.57■■□□□ 1.04
VAT1-208ENST00000590924 CNMDO75829 334 aa21.56■■□□□ 1.04
VAT1-208ENST00000590924 CCNA1P78396 465 aa21.56■■□□□ 1.04
VAT1-208ENST00000590924 SEPT2Q15019 361 aa21.56■■□□□ 1.04
VAT1-208ENST00000590924 MORN1Q5T089 497 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms