RNA–Protein interactions for RNA: ENST00000590599.1

CTDP1-205, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 2

Gene CTDP1, Length 1,762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-205ENST00000590599 PPFIA3O75145 1194 aa21.1■□□□□ 0.97
CTDP1-205ENST00000590599 ZNF280AP59817 542 aaPredicted RBP21.1■□□□□ 0.97
CTDP1-205ENST00000590599 CLEC17AQ6ZS10 378 aa21.1■□□□□ 0.97
CTDP1-205ENST00000590599 NEDD1Q8NHV4 660 aa21.1■□□□□ 0.97
CTDP1-205ENST00000590599 KAT14Q9H8E8 782 aa21.1■□□□□ 0.97
CTDP1-205ENST00000590599 TAOK2Q9UL54 1235 aa21.1■□□□□ 0.97
CTDP1-205ENST00000590599 TCP10L2B9ZVM9 353 aa21.1■□□□□ 0.97
CTDP1-205ENST00000590599 MCM4P33991 863 aa21.1■□□□□ 0.97
CTDP1-205ENST00000590599 PPP2R5BQ15173 497 aa21.1■□□□□ 0.97
CTDP1-205ENST00000590599 RCSD1Q6JBY9 416 aa21.1■□□□□ 0.97
CTDP1-205ENST00000590599 FANCBQ8NB91 859 aa21.1■□□□□ 0.97
CTDP1-205ENST00000590599 SMC1BQ8NDV3 1235 aa21.1■□□□□ 0.97
CTDP1-205ENST00000590599 DPF2Q92785 391 aa21.1■□□□□ 0.97
CTDP1-205ENST00000590599 VEZTQ9HBM0 779 aa21.1■□□□□ 0.97
CTDP1-205ENST00000590599 HACL1Q9UJ83 578 aa21.1■□□□□ 0.97
CTDP1-205ENST00000590599 H3BQV1 296 aa21.09■□□□□ 0.97
CTDP1-205ENST00000590599 BAG4O95429 457 aaKnown RBP21.09■□□□□ 0.97
CTDP1-205ENST00000590599 EPHX2P34913 555 aa21.09■□□□□ 0.97
CTDP1-205ENST00000590599 IFFO2Q5TF58 517 aa21.09■□□□□ 0.97
CTDP1-205ENST00000590599 SH3BP5LQ7L8J4 393 aa21.09■□□□□ 0.97
CTDP1-205ENST00000590599 ANKS1AQ92625 1134 aa21.09■□□□□ 0.97
CTDP1-205ENST00000590599 ZBED3Q96IU2 234 aaPredicted RBP21.09■□□□□ 0.97
CTDP1-205ENST00000590599 FAM217BQ9NTX9 383 aaPredicted RBP21.09■□□□□ 0.97
CTDP1-205ENST00000590599 ORC3Q9UBD5 711 aaPredicted RBP21.09■□□□□ 0.97
CTDP1-205ENST00000590599 PLIN4Q96Q06 1357 aa21.09■□□□□ 0.97
CTDP1-205ENST00000590599 DDX11L8A8MPP1 907 aa21.08■□□□□ 0.97
CTDP1-205ENST00000590599 F13A1P00488 732 aa21.08■□□□□ 0.97
CTDP1-205ENST00000590599 SHMT1P34896 483 aa21.08■□□□□ 0.97
CTDP1-205ENST00000590599 FSTL1Q12841 308 aa21.08■□□□□ 0.97
CTDP1-205ENST00000590599 FKBP1CQ5VVH2 108 aa21.08■□□□□ 0.97
CTDP1-205ENST00000590599 MICALL2Q8IY33 904 aa21.08■□□□□ 0.97
CTDP1-205ENST00000590599 STX8Q9UNK0 236 aa21.08■□□□□ 0.97
CTDP1-205ENST00000590599 WNT10BO00744 389 aa21.08■□□□□ 0.96
CTDP1-205ENST00000590599 FDPSP14324 419 aaKnown RBP21.08■□□□□ 0.96
CTDP1-205ENST00000590599 TROAPQ12815 778 aa21.08■□□□□ 0.96
CTDP1-205ENST00000590599 RBM28Q9NW13 759 aaKnown RBP21.08■□□□□ 0.96
CTDP1-205ENST00000590599 ATP6V1DQ9Y5K8 247 aa21.08■□□□□ 0.96
CTDP1-205ENST00000590599 IQCA1LA6NCM1 817 aa21.07■□□□□ 0.96
CTDP1-205ENST00000590599 GOLGA6L22H0YM25 854 aa21.07■□□□□ 0.96
CTDP1-205ENST00000590599 NTRK3Q16288 839 aa21.07■□□□□ 0.96
CTDP1-205ENST00000590599 NBPF9Q3BBW0 867 aa21.07■□□□□ 0.96
CTDP1-205ENST00000590599 CDC37L1Q7L3B6 337 aa21.07■□□□□ 0.96
CTDP1-205ENST00000590599 FOXP4Q8IVH2 680 aaPredicted RBP21.07■□□□□ 0.96
CTDP1-205ENST00000590599 CTCFLQ8NI51 663 aaPredicted RBP21.07■□□□□ 0.96
CTDP1-205ENST00000590599 FAM151AQ8WW52 585 aa21.07■□□□□ 0.96
CTDP1-205ENST00000590599 CSRNP1Q96S65 589 aa21.07■□□□□ 0.96
CTDP1-205ENST00000590599 CNOT7Q9UIV1 285 aaKnown RBP21.07■□□□□ 0.96
CTDP1-205ENST00000590599 STK36Q9NRP7 1315 aa21.06■□□□□ 0.96
CTDP1-205ENST00000590599 AKR1B1P15121 316 aa21.06■□□□□ 0.96
CTDP1-205ENST00000590599 IFNAR1P17181 557 aa21.06■□□□□ 0.96
CTDP1-205ENST00000590599 RBM26Q5T8P6 1007 aaKnown RBP21.06■□□□□ 0.96
CTDP1-205ENST00000590599 PNMA1Q8ND90 353 aa21.06■□□□□ 0.96
CTDP1-205ENST00000590599 PHKBQ93100 1093 aa21.06■□□□□ 0.96
CTDP1-205ENST00000590599 CEP95Q96GE4 821 aa21.06■□□□□ 0.96
CTDP1-205ENST00000590599 CNTNAP1P78357 1384 aa21.05■□□□□ 0.96
CTDP1-205ENST00000590599 FOSBP53539 338 aa21.05■□□□□ 0.96
CTDP1-205ENST00000590599 SSRP1Q08945 709 aaKnown RBP21.05■□□□□ 0.96
CTDP1-205ENST00000590599 TRIM22Q8IYM9 498 aa21.05■□□□□ 0.96
CTDP1-205ENST00000590599 CCDC17Q96LX7 622 aa21.05■□□□□ 0.96
CTDP1-205ENST00000590599 DNAJC18Q9H819 358 aa21.05■□□□□ 0.96
CTDP1-205ENST00000590599 CLEC11AQ9Y240 323 aa21.05■□□□□ 0.96
CTDP1-205ENST00000590599 CHADLQ6NUI6 762 aa21.05■□□□□ 0.96
CTDP1-205ENST00000590599 FAM83AQ86UY5 434 aa21.05■□□□□ 0.96
CTDP1-205ENST00000590599 TMEM47Q9BQJ4 181 aa21.05■□□□□ 0.96
CTDP1-205ENST00000590599 SLC26A6Q9BXS9 759 aa21.05■□□□□ 0.96
CTDP1-205ENST00000590599 FAM196BA6NMK8 535 aa21.04■□□□□ 0.96
CTDP1-205ENST00000590599 MPHOSPH10O00566 681 aaKnown RBP21.04■□□□□ 0.96
CTDP1-205ENST00000590599 FMNL1O95466 1100 aaPredicted RBP21.04■□□□□ 0.96
CTDP1-205ENST00000590599 KIF5BP33176 963 aa21.04■□□□□ 0.96
CTDP1-205ENST00000590599 FMR1Q06787 632 aaKnown RBP eCLIP21.04■□□□□ 0.96
CTDP1-205ENST00000590599 MAP1SQ66K74 1059 aaPredicted RBP21.04■□□□□ 0.96
CTDP1-205ENST00000590599 METTL16Q86W50 562 aaKnown RBP21.04■□□□□ 0.96
CTDP1-205ENST00000590599 C8orf76Q96K31 380 aa21.04■□□□□ 0.96
CTDP1-205ENST00000590599 GREB1LQ9C091 1923 aaPredicted RBP21.04■□□□□ 0.96
CTDP1-205ENST00000590599 TOP1P11387 765 aaKnown RBP21.03■□□□□ 0.96
CTDP1-205ENST00000590599 TNNI2P48788 182 aa21.03■□□□□ 0.96
CTDP1-205ENST00000590599 CERKLQ49MI3 558 aaPredicted RBP21.03■□□□□ 0.96
CTDP1-205ENST00000590599 MCTP1Q6DN14 999 aa21.03■□□□□ 0.96
CTDP1-205ENST00000590599 ANP32EQ9BTT0 268 aa21.03■□□□□ 0.96
CTDP1-205ENST00000590599 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.03■□□□□ 0.96
CTDP1-205ENST00000590599 GPRC5DQ9NZD1 345 aa21.03■□□□□ 0.96
CTDP1-205ENST00000590599 POLR2AP24928 1970 aaKnown RBP21.03■□□□□ 0.96
CTDP1-205ENST00000590599 H7C1D1 291 aa21.02■□□□□ 0.96
CTDP1-205ENST00000590599 EGFRP00533 1210 aa21.02■□□□□ 0.96
CTDP1-205ENST00000590599 SLURP2P0DP57 97 aa21.02■□□□□ 0.96
CTDP1-205ENST00000590599 PTMSP20962 102 aa21.02■□□□□ 0.96
CTDP1-205ENST00000590599 KIF4BQ2VIQ3 1234 aa21.02■□□□□ 0.96
CTDP1-205ENST00000590599 FOXD4L6Q3SYB3 417 aaPredicted RBP21.02■□□□□ 0.96
CTDP1-205ENST00000590599 TBC1D10BQ4KMP7 808 aaPredicted RBP21.02■□□□□ 0.96
CTDP1-205ENST00000590599 FOXD4L3Q6VB84 417 aaPredicted RBP21.02■□□□□ 0.96
CTDP1-205ENST00000590599 SAMD7Q7Z3H4 446 aa21.02■□□□□ 0.96
CTDP1-205ENST00000590599 FERMT3Q86UX7 667 aa21.02■□□□□ 0.96
CTDP1-205ENST00000590599 WASF1Q92558 559 aa21.02■□□□□ 0.96
CTDP1-205ENST00000590599 MAP3K14Q99558 947 aa21.02■□□□□ 0.96
CTDP1-205ENST00000590599 ALG1Q9BT22 464 aa21.02■□□□□ 0.96
CTDP1-205ENST00000590599 MTMR4Q9NYA4 1195 aa21.02■□□□□ 0.96
CTDP1-205ENST00000590599 HERC5Q9UII4 1024 aaKnown RBP21.02■□□□□ 0.96
CTDP1-205ENST00000590599 IGKV6D-41A0A0C4DH26 115 aa21.02■□□□□ 0.96
CTDP1-205ENST00000590599 LMOD1P29536 600 aaPredicted RBP21.02■□□□□ 0.96
CTDP1-205ENST00000590599 APLP1P51693 650 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms