RNA–Protein interactions for RNA: ENST00000590388.5

TUBB6-208, Transcript of tubulin beta 6 class V, humanhuman

TSL 4

Gene TUBB6, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB6-208ENST00000590388 SDSP20132 328 aa14.9□□□□□ -0.02
TUBB6-208ENST00000590388 USP14P54578 494 aa14.9□□□□□ -0.02
TUBB6-208ENST00000590388 LACTBP83111 547 aaPredicted RBP14.9□□□□□ -0.02
TUBB6-208ENST00000590388 CAP1Q01518 475 aa14.9□□□□□ -0.02
TUBB6-208ENST00000590388 NMIQ13287 307 aaPredicted RBP14.9□□□□□ -0.02
TUBB6-208ENST00000590388 ALX1Q15699 326 aa14.9□□□□□ -0.02
TUBB6-208ENST00000590388 TTC22Q5TAA0 569 aa14.9□□□□□ -0.02
TUBB6-208ENST00000590388 USP17L2Q6R6M4 530 aa14.9□□□□□ -0.02
TUBB6-208ENST00000590388 CCDC129Q6ZRS4 1044 aa14.9□□□□□ -0.02
TUBB6-208ENST00000590388 NAPBQ9H115 298 aa14.9□□□□□ -0.02
TUBB6-208ENST00000590388 EMILIN3Q9NT22 766 aa14.9□□□□□ -0.02
TUBB6-208ENST00000590388 TMOD4Q9NZQ9 345 aa14.9□□□□□ -0.02
TUBB6-208ENST00000590388 PARP14Q460N5 1801 aa14.89□□□□□ -0.03
TUBB6-208ENST00000590388 MINDY4BA8MYZ0 360 aa14.89□□□□□ -0.03
TUBB6-208ENST00000590388 HIP1O00291 1037 aa14.89□□□□□ -0.03
TUBB6-208ENST00000590388 GSPT1P15170 499 aaKnown RBP14.89□□□□□ -0.03
TUBB6-208ENST00000590388 ARHGEF6Q15052 776 aa14.89□□□□□ -0.03
TUBB6-208ENST00000590388 VPS53Q5VIR6 699 aa14.89□□□□□ -0.03
TUBB6-208ENST00000590388 FBXO46Q6PJ61 603 aaPredicted RBP14.89□□□□□ -0.03
TUBB6-208ENST00000590388 CENPQQ7L2Z9 268 aaPredicted RBP14.89□□□□□ -0.03
TUBB6-208ENST00000590388 ACER1Q8TDN7 264 aa14.89□□□□□ -0.03
TUBB6-208ENST00000590388 FEZ1Q99689 392 aa14.89□□□□□ -0.03
TUBB6-208ENST00000590388 ASCC2Q9H1I8 757 aaPredicted RBP14.89□□□□□ -0.03
TUBB6-208ENST00000590388 ZNF287Q9HBT7 754 aa14.89□□□□□ -0.03
TUBB6-208ENST00000590388 CPA4Q9UI42 421 aa14.89□□□□□ -0.03
TUBB6-208ENST00000590388 CCDC171Q6TFL3 1326 aa14.89□□□□□ -0.03
TUBB6-208ENST00000590388 RLFQ13129 1914 aa14.88□□□□□ -0.03
TUBB6-208ENST00000590388 PLIN4Q96Q06 1357 aa14.88□□□□□ -0.03
TUBB6-208ENST00000590388 MYH4Q9Y623 1939 aa14.88□□□□□ -0.03
TUBB6-208ENST00000590388 MPHOSPH10O00566 681 aaKnown RBP14.88□□□□□ -0.03
TUBB6-208ENST00000590388 GNRH1P01148 92 aa14.88□□□□□ -0.03
TUBB6-208ENST00000590388 RASA1P20936 1047 aa14.88□□□□□ -0.03
TUBB6-208ENST00000590388 GCLCP48506 637 aaPredicted RBP14.88□□□□□ -0.03
TUBB6-208ENST00000590388 ZNF589Q86UQ0 364 aaPredicted RBP14.88□□□□□ -0.03
TUBB6-208ENST00000590388 SIAH1Q8IUQ4 282 aa14.88□□□□□ -0.03
TUBB6-208ENST00000590388 SMCR8Q8TEV9 937 aaPredicted RBP14.88□□□□□ -0.03
TUBB6-208ENST00000590388 EFCC1Q9HA90 598 aa14.88□□□□□ -0.03
TUBB6-208ENST00000590388 ANAPC4Q9UJX5 808 aa14.88□□□□□ -0.03
TUBB6-208ENST00000590388 TRIM17Q9Y577 477 aa14.88□□□□□ -0.03
TUBB6-208ENST00000590388 A0A0G2JMZ2 1700 aa14.87□□□□□ -0.03
TUBB6-208ENST00000590388 A0A1W2PRG0 241 aa14.87□□□□□ -0.03
TUBB6-208ENST00000590388 HSPD1P10809 573 aaKnown RBP14.87□□□□□ -0.03
TUBB6-208ENST00000590388 OSBPP22059 807 aa14.87□□□□□ -0.03
TUBB6-208ENST00000590388 MFAP1P55081 439 aaKnown RBP14.87□□□□□ -0.03
TUBB6-208ENST00000590388 ICA1Q05084 483 aa14.87□□□□□ -0.03
TUBB6-208ENST00000590388 PPARAQ07869 468 aa14.87□□□□□ -0.03
TUBB6-208ENST00000590388 FAM110CQ1W6H9 321 aa14.87□□□□□ -0.03
TUBB6-208ENST00000590388 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.87□□□□□ -0.03
TUBB6-208ENST00000590388 KANSL2Q9H9L4 492 aa14.87□□□□□ -0.03
TUBB6-208ENST00000590388 ARHGEF10LQ9HCE6 1279 aa14.87□□□□□ -0.03
TUBB6-208ENST00000590388 TMX2Q9Y320 296 aa14.87□□□□□ -0.03
TUBB6-208ENST00000590388 SLC3A2P08195 630 aaKnown RBP14.86□□□□□ -0.03
TUBB6-208ENST00000590388 VCAM1P19320 739 aa14.86□□□□□ -0.03
TUBB6-208ENST00000590388 IRX3P78415 501 aaPredicted RBP14.86□□□□□ -0.03
TUBB6-208ENST00000590388 PDE4BQ07343 736 aa14.86□□□□□ -0.03
TUBB6-208ENST00000590388 KIF22Q14807 665 aa14.86□□□□□ -0.03
TUBB6-208ENST00000590388 GTF3C2Q8WUA4 911 aaPredicted RBP14.86□□□□□ -0.03
TUBB6-208ENST00000590388 LPAR1Q92633 364 aa14.86□□□□□ -0.03
TUBB6-208ENST00000590388 SH2D4AQ9H788 454 aa14.86□□□□□ -0.03
TUBB6-208ENST00000590388 MKNK2Q9HBH9 465 aa14.86□□□□□ -0.03
TUBB6-208ENST00000590388 DIAPH3Q9NSV4 1193 aa14.86□□□□□ -0.03
TUBB6-208ENST00000590388 MORF4L1Q9UBU8 362 aa14.86□□□□□ -0.03
TUBB6-208ENST00000590388 HPS5Q9UPZ3 1129 aa14.86□□□□□ -0.03
TUBB6-208ENST00000590388 PTPN22Q9Y2R2 807 aa14.86□□□□□ -0.03
TUBB6-208ENST00000590388 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.86□□□□□ -0.03
TUBB6-208ENST00000590388 DOCK3Q8IZD9 2030 aa14.86□□□□□ -0.03
TUBB6-208ENST00000590388 CENPFP49454 3210 aa14.85□□□□□ -0.03
TUBB6-208ENST00000590388 IGKV6D-41A0A0C4DH26 115 aa14.85□□□□□ -0.03
TUBB6-208ENST00000590388 USP17L15C9J2P7 530 aa14.85□□□□□ -0.03
TUBB6-208ENST00000590388 USP17L13C9JLJ4 530 aa14.85□□□□□ -0.03
TUBB6-208ENST00000590388 USP17L11C9JVI0 530 aa14.85□□□□□ -0.03
TUBB6-208ENST00000590388 USP17L18D6R9N7 530 aa14.85□□□□□ -0.03
TUBB6-208ENST00000590388 USP17L22D6RA61 530 aa14.85□□□□□ -0.03
TUBB6-208ENST00000590388 USP17L17D6RBQ6 530 aa14.85□□□□□ -0.03
TUBB6-208ENST00000590388 USP17L19D6RCP7 530 aa14.85□□□□□ -0.03
TUBB6-208ENST00000590388 USP17L20D6RJB6 530 aa14.85□□□□□ -0.03
TUBB6-208ENST00000590388 FGAP02671 866 aa14.85□□□□□ -0.03
TUBB6-208ENST00000590388 FGRP09769 529 aa14.85□□□□□ -0.03
TUBB6-208ENST00000590388 CTGFP29279 349 aa14.85□□□□□ -0.03
TUBB6-208ENST00000590388 PRMT2P55345 433 aa14.85□□□□□ -0.03
TUBB6-208ENST00000590388 HERVK_113P62684 666 aa14.85□□□□□ -0.03
TUBB6-208ENST00000590388 USP17L24Q0WX57 530 aa14.85□□□□□ -0.03
TUBB6-208ENST00000590388 CLEC10AQ8IUN9 316 aa14.85□□□□□ -0.03
TUBB6-208ENST00000590388 TRIM47Q96LD4 638 aa14.85□□□□□ -0.03
TUBB6-208ENST00000590388 ARHGAP39Q9C0H5 1083 aa14.85□□□□□ -0.03
TUBB6-208ENST00000590388 RBBP6Q7Z6E9 1792 aaKnown RBP14.84□□□□□ -0.03
TUBB6-208ENST00000590388 PSMC4P43686 418 aa14.84□□□□□ -0.03
TUBB6-208ENST00000590388 ZYXQ15942 572 aaKnown RBP14.84□□□□□ -0.03
TUBB6-208ENST00000590388 CWC27Q6UX04 472 aaKnown RBP14.84□□□□□ -0.03
TUBB6-208ENST00000590388 LBX2Q6XYB7 198 aa14.84□□□□□ -0.03
TUBB6-208ENST00000590388 CATSPERGQ6ZRH7 1159 aa14.84□□□□□ -0.03
TUBB6-208ENST00000590388 ANKRD13CQ8N6S4 541 aa14.84□□□□□ -0.03
TUBB6-208ENST00000590388 P2RX7Q99572 595 aaKnown RBP14.84□□□□□ -0.03
TUBB6-208ENST00000590388 VCPKMTQ9H867 229 aa14.84□□□□□ -0.03
TUBB6-208ENST00000590388 NYAP2Q9P242 653 aa14.84□□□□□ -0.03
TUBB6-208ENST00000590388 SYNPO2Q9UMS6 1093 aa14.84□□□□□ -0.03
TUBB6-208ENST00000590388 RAD50Q92878 1312 aa14.84□□□□□ -0.03
TUBB6-208ENST00000590388 PRDM1O75626 825 aa14.83□□□□□ -0.04
TUBB6-208ENST00000590388 EEF2P13639 858 aaKnown RBP14.83□□□□□ -0.04
TUBB6-208ENST00000590388 FCGRTP55899 365 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms