RNA–Protein interactions for RNA: ENST00000590266.5

SCAMP4-212, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-212ENST00000590266 GSPT1P15170 499 aaKnown RBP16.75■□□□□ 0.27
SCAMP4-212ENST00000590266 IRX3P78415 501 aaPredicted RBP16.75■□□□□ 0.27
SCAMP4-212ENST00000590266 PABPC4Q13310 644 aaKnown RBP eCLIP16.75■□□□□ 0.27
SCAMP4-212ENST00000590266 TTC22Q5TAA0 569 aa16.75■□□□□ 0.27
SCAMP4-212ENST00000590266 USP17L2Q6R6M4 530 aa16.75■□□□□ 0.27
SCAMP4-212ENST00000590266 CWC27Q6UX04 472 aaKnown RBP16.75■□□□□ 0.27
SCAMP4-212ENST00000590266 TMEM179Q6ZVK1 233 aa16.75■□□□□ 0.27
SCAMP4-212ENST00000590266 ZNF589Q86UQ0 364 aaPredicted RBP16.75■□□□□ 0.27
SCAMP4-212ENST00000590266 ARHGAP39Q9C0H5 1083 aa16.75■□□□□ 0.27
SCAMP4-212ENST00000590266 EFCC1Q9HA90 598 aa16.75■□□□□ 0.27
SCAMP4-212ENST00000590266 CENPBP07199 599 aaPredicted RBP16.74■□□□□ 0.27
SCAMP4-212ENST00000590266 OSBPP22059 807 aa16.74■□□□□ 0.27
SCAMP4-212ENST00000590266 ICA1Q05084 483 aa16.74■□□□□ 0.27
SCAMP4-212ENST00000590266 C17orf99Q6UX52 265 aa16.74■□□□□ 0.27
SCAMP4-212ENST00000590266 OTOP1Q7RTM1 612 aa16.74■□□□□ 0.27
SCAMP4-212ENST00000590266 CCDC17Q96LX7 622 aa16.74■□□□□ 0.27
SCAMP4-212ENST00000590266 ASCC2Q9H1I8 757 aaPredicted RBP16.74■□□□□ 0.27
SCAMP4-212ENST00000590266 EMILIN3Q9NT22 766 aa16.74■□□□□ 0.27
SCAMP4-212ENST00000590266 SLC45A1Q9Y2W3 748 aa16.74■□□□□ 0.27
SCAMP4-212ENST00000590266 LAMB1P07942 1786 aa16.74■□□□□ 0.27
SCAMP4-212ENST00000590266 ADGRA2Q96PE1 1338 aa16.73■□□□□ 0.27
SCAMP4-212ENST00000590266 FOXP2O15409 715 aa16.73■□□□□ 0.27
SCAMP4-212ENST00000590266 RAD21O60216 631 aa16.73■□□□□ 0.27
SCAMP4-212ENST00000590266 LACTBP83111 547 aaPredicted RBP16.73■□□□□ 0.27
SCAMP4-212ENST00000590266 CAP1Q01518 475 aa16.73■□□□□ 0.27
SCAMP4-212ENST00000590266 PPARAQ07869 468 aa16.73■□□□□ 0.27
SCAMP4-212ENST00000590266 FBXO46Q6PJ61 603 aaPredicted RBP16.73■□□□□ 0.27
SCAMP4-212ENST00000590266 CENPQQ7L2Z9 268 aaPredicted RBP16.73■□□□□ 0.27
SCAMP4-212ENST00000590266 ANKRD13CQ8N6S4 541 aa16.73■□□□□ 0.27
SCAMP4-212ENST00000590266 CCDC136Q96JN2 1154 aa16.73■□□□□ 0.27
SCAMP4-212ENST00000590266 CCDC171Q6TFL3 1326 aa16.72■□□□□ 0.27
SCAMP4-212ENST00000590266 MYH7P12883 1935 aa16.72■□□□□ 0.27
SCAMP4-212ENST00000590266 A0A1W2PRG0 241 aa16.72■□□□□ 0.27
SCAMP4-212ENST00000590266 HIP1O00291 1037 aa16.72■□□□□ 0.27
SCAMP4-212ENST00000590266 FMNL1O95466 1100 aaPredicted RBP16.72■□□□□ 0.27
SCAMP4-212ENST00000590266 SLC3A2P08195 630 aaKnown RBP16.72■□□□□ 0.27
SCAMP4-212ENST00000590266 RASA1P20936 1047 aa16.72■□□□□ 0.27
SCAMP4-212ENST00000590266 USP14P54578 494 aa16.72■□□□□ 0.27
SCAMP4-212ENST00000590266 CTDSPL2Q05D32 466 aa16.72■□□□□ 0.27
SCAMP4-212ENST00000590266 ARHGEF6Q15052 776 aa16.72■□□□□ 0.27
SCAMP4-212ENST00000590266 SKAP1Q86WV1 359 aa16.72■□□□□ 0.27
SCAMP4-212ENST00000590266 ZNF444Q8N0Y2 327 aaPredicted RBP16.72■□□□□ 0.27
SCAMP4-212ENST00000590266 KIAA1683Q9H0B3 1180 aa16.72■□□□□ 0.27
SCAMP4-212ENST00000590266 ZNF287Q9HBT7 754 aa16.72■□□□□ 0.27
SCAMP4-212ENST00000590266 ARHGEF10LQ9HCE6 1279 aa16.72■□□□□ 0.27
SCAMP4-212ENST00000590266 TAOK2Q9UL54 1235 aa16.72■□□□□ 0.27
SCAMP4-212ENST00000590266 ROBO3Q96MS0 1386 aa16.72■□□□□ 0.27
SCAMP4-212ENST00000590266 VCAM1P19320 739 aa16.71■□□□□ 0.27
SCAMP4-212ENST00000590266 PSMC4P43686 418 aa16.71■□□□□ 0.27
SCAMP4-212ENST00000590266 MFAP1P55081 439 aaKnown RBP16.71■□□□□ 0.27
SCAMP4-212ENST00000590266 PDE4BQ07343 736 aa16.71■□□□□ 0.27
SCAMP4-212ENST00000590266 ATAD5Q96QE3 1844 aa16.7■□□□□ 0.26
SCAMP4-212ENST00000590266 HSPD1P10809 573 aaKnown RBP16.7■□□□□ 0.26
SCAMP4-212ENST00000590266 BCRP11274 1271 aa16.7■□□□□ 0.26
SCAMP4-212ENST00000590266 EEF2P13639 858 aaKnown RBP16.7■□□□□ 0.26
SCAMP4-212ENST00000590266 FAM47AQ5JRC9 791 aa16.7■□□□□ 0.26
SCAMP4-212ENST00000590266 SAMD1Q6SPF0 538 aaPredicted RBP16.7■□□□□ 0.26
SCAMP4-212ENST00000590266 TICAM2Q86XR7 235 aa16.7■□□□□ 0.26
SCAMP4-212ENST00000590266 SPICE1Q8N0Z3 855 aa16.7■□□□□ 0.26
SCAMP4-212ENST00000590266 P2RX7Q99572 595 aaKnown RBP16.7■□□□□ 0.26
SCAMP4-212ENST00000590266 PAGR1Q9BTK6 254 aa16.7■□□□□ 0.26
SCAMP4-212ENST00000590266 RPAP3Q9H6T3 665 aaPredicted RBP16.7■□□□□ 0.26
SCAMP4-212ENST00000590266 TOMM22Q9NS69 142 aa16.7■□□□□ 0.26
SCAMP4-212ENST00000590266 PHIPQ8WWQ0 1821 aa16.69■□□□□ 0.26
SCAMP4-212ENST00000590266 PEX10O60683 326 aa16.69■□□□□ 0.26
SCAMP4-212ENST00000590266 FGAP02671 866 aa16.69■□□□□ 0.26
SCAMP4-212ENST00000590266 CTGFP29279 349 aa16.69■□□□□ 0.26
SCAMP4-212ENST00000590266 HAND2P61296 217 aa16.69■□□□□ 0.26
SCAMP4-212ENST00000590266 TRIM47Q96LD4 638 aa16.69■□□□□ 0.26
SCAMP4-212ENST00000590266 C12orf42Q96LP6 360 aa16.69■□□□□ 0.26
SCAMP4-212ENST00000590266 TANGO6Q9C0B7 1094 aa16.69■□□□□ 0.26
SCAMP4-212ENST00000590266 SH2D4AQ9H788 454 aa16.69■□□□□ 0.26
SCAMP4-212ENST00000590266 KANSL2Q9H9L4 492 aa16.69■□□□□ 0.26
SCAMP4-212ENST00000590266 INCENPQ9NQS7 918 aa16.69■□□□□ 0.26
SCAMP4-212ENST00000590266 PTPN22Q9Y2R2 807 aa16.69■□□□□ 0.26
SCAMP4-212ENST00000590266 USP17L15C9J2P7 530 aa16.68■□□□□ 0.26
SCAMP4-212ENST00000590266 USP17L13C9JLJ4 530 aa16.68■□□□□ 0.26
SCAMP4-212ENST00000590266 USP17L11C9JVI0 530 aa16.68■□□□□ 0.26
SCAMP4-212ENST00000590266 USP17L18D6R9N7 530 aa16.68■□□□□ 0.26
SCAMP4-212ENST00000590266 USP17L22D6RA61 530 aa16.68■□□□□ 0.26
SCAMP4-212ENST00000590266 USP17L17D6RBQ6 530 aa16.68■□□□□ 0.26
SCAMP4-212ENST00000590266 USP17L19D6RCP7 530 aa16.68■□□□□ 0.26
SCAMP4-212ENST00000590266 USP17L20D6RJB6 530 aa16.68■□□□□ 0.26
SCAMP4-212ENST00000590266 TSPY3P0CV98 308 aa16.68■□□□□ 0.26
SCAMP4-212ENST00000590266 TSPY8P0CW00 308 aa16.68■□□□□ 0.26
SCAMP4-212ENST00000590266 HOXA7P31268 230 aaPredicted RBP16.68■□□□□ 0.26
SCAMP4-212ENST00000590266 GCLCP48506 637 aaPredicted RBP16.68■□□□□ 0.26
SCAMP4-212ENST00000590266 FCGRTP55899 365 aa16.68■□□□□ 0.26
SCAMP4-212ENST00000590266 HERVK_113P62684 666 aa16.68■□□□□ 0.26
SCAMP4-212ENST00000590266 USP17L24Q0WX57 530 aa16.68■□□□□ 0.26
SCAMP4-212ENST00000590266 SIAH1Q8IUQ4 282 aa16.68■□□□□ 0.26
SCAMP4-212ENST00000590266 BAZ2AQ9UIF9 1905 aaKnown RBP16.68■□□□□ 0.26
SCAMP4-212ENST00000590266 TFAP4Q01664 338 aa16.67■□□□□ 0.26
SCAMP4-212ENST00000590266 ALX1Q15699 326 aa16.67■□□□□ 0.26
SCAMP4-212ENST00000590266 FAM110CQ1W6H9 321 aa16.67■□□□□ 0.26
SCAMP4-212ENST00000590266 RRP12Q5JTH9 1297 aaKnown RBP16.67■□□□□ 0.26
SCAMP4-212ENST00000590266 KIAA1755Q5JYT7 1200 aa16.67■□□□□ 0.26
SCAMP4-212ENST00000590266 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.67■□□□□ 0.26
SCAMP4-212ENST00000590266 CLIP2Q9UDT6 1046 aa16.67■□□□□ 0.26
SCAMP4-212ENST00000590266 TMX2Q9Y320 296 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms