RNA–Protein interactions for RNA: ENST00000590248.1

NEDD4L-228, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 730 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-228ENST00000590248 TAOK2Q9UL54 1235 aa16.54■□□□□ 0.24
NEDD4L-228ENST00000590248 PLXNB2O15031 1838 aa16.54■□□□□ 0.24
NEDD4L-228ENST00000590248 RNF113AO15541 343 aaKnown RBP16.53■□□□□ 0.24
NEDD4L-228ENST00000590248 AKR1B1P15121 316 aa16.53■□□□□ 0.24
NEDD4L-228ENST00000590248 FAM110CQ1W6H9 321 aa16.53■□□□□ 0.24
NEDD4L-228ENST00000590248 Q3C1V9 767 aa16.53■□□□□ 0.24
NEDD4L-228ENST00000590248 CTR9Q6PD62 1173 aa16.53■□□□□ 0.24
NEDD4L-228ENST00000590248 POTEEQ6S8J3 1075 aa16.53■□□□□ 0.24
NEDD4L-228ENST00000590248 TTC41PQ6P2S7 1318 aa16.52■□□□□ 0.24
NEDD4L-228ENST00000590248 A0A1W2PRG0 241 aa16.52■□□□□ 0.24
NEDD4L-228ENST00000590248 M0R2C6 588 aa16.52■□□□□ 0.24
NEDD4L-228ENST00000590248 ELNP15502 786 aa16.52■□□□□ 0.24
NEDD4L-228ENST00000590248 HERVK_113P62684 666 aa16.52■□□□□ 0.24
NEDD4L-228ENST00000590248 CLEC10AQ8IUN9 316 aa16.52■□□□□ 0.24
NEDD4L-228ENST00000590248 EXOC6Q8TAG9 804 aa16.52■□□□□ 0.24
NEDD4L-228ENST00000590248 APPBP2Q92624 585 aa16.52■□□□□ 0.24
NEDD4L-228ENST00000590248 SEC62Q99442 399 aaKnown RBP16.52■□□□□ 0.24
NEDD4L-228ENST00000590248 RBPJLQ9UBG7 517 aa16.52■□□□□ 0.24
NEDD4L-228ENST00000590248 BIN2Q9UBW5 565 aaPredicted RBP16.52■□□□□ 0.24
NEDD4L-228ENST00000590248 ERC2O15083 957 aa16.51■□□□□ 0.23
NEDD4L-228ENST00000590248 ADCY3O60266 1144 aa16.51■□□□□ 0.23
NEDD4L-228ENST00000590248 MX1P20591 662 aa16.51■□□□□ 0.23
NEDD4L-228ENST00000590248 CDK8P49336 464 aa16.51■□□□□ 0.23
NEDD4L-228ENST00000590248 HDAC1Q13547 482 aaPredicted RBP16.51■□□□□ 0.23
NEDD4L-228ENST00000590248 PAGR1Q9BTK6 254 aa16.51■□□□□ 0.23
NEDD4L-228ENST00000590248 KIAA1683Q9H0B3 1180 aa16.51■□□□□ 0.23
NEDD4L-228ENST00000590248 SWAP70Q9UH65 585 aa16.51■□□□□ 0.23
NEDD4L-228ENST00000590248 SALL3Q9BXA9 1300 aa16.5■□□□□ 0.23
NEDD4L-228ENST00000590248 GSG1L2A8MUP6 293 aa16.5■□□□□ 0.23
NEDD4L-228ENST00000590248 GPAA1O43292 621 aa16.5■□□□□ 0.23
NEDD4L-228ENST00000590248 GLRX3O76003 335 aaKnown RBP16.5■□□□□ 0.23
NEDD4L-228ENST00000590248 B4GALNT3Q6L9W6 998 aa16.5■□□□□ 0.23
NEDD4L-228ENST00000590248 SIAH1Q8IUQ4 282 aa16.5■□□□□ 0.23
NEDD4L-228ENST00000590248 COA7Q96BR5 231 aa16.5■□□□□ 0.23
NEDD4L-228ENST00000590248 GCC1Q96CN9 775 aa16.5■□□□□ 0.23
NEDD4L-228ENST00000590248 DDRGK1Q96HY6 314 aa16.5■□□□□ 0.23
NEDD4L-228ENST00000590248 C12orf42Q96LP6 360 aa16.5■□□□□ 0.23
NEDD4L-228ENST00000590248 MORF4L1Q9UBU8 362 aa16.5■□□□□ 0.23
NEDD4L-228ENST00000590248 ZBTB47Q9UFB7 747 aaPredicted RBP16.5■□□□□ 0.23
NEDD4L-228ENST00000590248 SUPT16HQ9Y5B9 1047 aaKnown RBP16.5■□□□□ 0.23
NEDD4L-228ENST00000590248 MINDY4BA8MYZ0 360 aa16.49■□□□□ 0.23
NEDD4L-228ENST00000590248 USP17L15C9J2P7 530 aa16.49■□□□□ 0.23
NEDD4L-228ENST00000590248 USP17L13C9JLJ4 530 aa16.49■□□□□ 0.23
NEDD4L-228ENST00000590248 USP17L11C9JVI0 530 aa16.49■□□□□ 0.23
NEDD4L-228ENST00000590248 USP17L18D6R9N7 530 aa16.49■□□□□ 0.23
NEDD4L-228ENST00000590248 USP17L22D6RA61 530 aa16.49■□□□□ 0.23
NEDD4L-228ENST00000590248 USP17L17D6RBQ6 530 aa16.49■□□□□ 0.23
NEDD4L-228ENST00000590248 USP17L19D6RCP7 530 aa16.49■□□□□ 0.23
NEDD4L-228ENST00000590248 USP17L20D6RJB6 530 aa16.49■□□□□ 0.23
NEDD4L-228ENST00000590248 IGHDP01880 384 aa16.49■□□□□ 0.23
NEDD4L-228ENST00000590248 VCAM1P19320 739 aa16.49■□□□□ 0.23
NEDD4L-228ENST00000590248 USP14P54578 494 aa16.49■□□□□ 0.23
NEDD4L-228ENST00000590248 USP17L24Q0WX57 530 aa16.49■□□□□ 0.23
NEDD4L-228ENST00000590248 KIAA1755Q5JYT7 1200 aa16.49■□□□□ 0.23
NEDD4L-228ENST00000590248 CATSPERGQ6ZRH7 1159 aa16.49■□□□□ 0.23
NEDD4L-228ENST00000590248 TMEM179Q6ZVK1 233 aa16.49■□□□□ 0.23
NEDD4L-228ENST00000590248 AMOTL1Q8IY63 956 aa16.49■□□□□ 0.23
NEDD4L-228ENST00000590248 GPRC5AQ8NFJ5 357 aa16.49■□□□□ 0.23
NEDD4L-228ENST00000590248 FSD1Q9BTV5 496 aa16.49■□□□□ 0.23
NEDD4L-228ENST00000590248 RPAP3Q9H6T3 665 aaPredicted RBP16.49■□□□□ 0.23
NEDD4L-228ENST00000590248 GJD2Q9UKL4 321 aa16.49■□□□□ 0.23
NEDD4L-228ENST00000590248 RLFQ13129 1914 aa16.49■□□□□ 0.23
NEDD4L-228ENST00000590248 ZFYP08048 801 aaPredicted RBP16.48■□□□□ 0.23
NEDD4L-228ENST00000590248 CCL5P13501 91 aa16.48■□□□□ 0.23
NEDD4L-228ENST00000590248 C16orf86Q6ZW13 317 aa16.48■□□□□ 0.23
NEDD4L-228ENST00000590248 SLAIN1Q8ND83 568 aa16.48■□□□□ 0.23
NEDD4L-228ENST00000590248 LNPKQ9C0E8 428 aa16.48■□□□□ 0.23
NEDD4L-228ENST00000590248 RNF208Q9H0X6 261 aa16.48■□□□□ 0.23
NEDD4L-228ENST00000590248 UNC93B1Q9H1C4 597 aa16.48■□□□□ 0.23
NEDD4L-228ENST00000590248 PORCNQ9H237 461 aa16.48■□□□□ 0.23
NEDD4L-228ENST00000590248 EPB41L4AQ9HCS5 686 aaPredicted RBP16.48■□□□□ 0.23
NEDD4L-228ENST00000590248 CNMDO75829 334 aa16.47■□□□□ 0.23
NEDD4L-228ENST00000590248 APPP05067 770 aa16.47■□□□□ 0.23
NEDD4L-228ENST00000590248 INHAP05111 366 aa16.47■□□□□ 0.23
NEDD4L-228ENST00000590248 CYP2B6P20813 491 aa16.47■□□□□ 0.23
NEDD4L-228ENST00000590248 ERVK-9P63128 1117 aa16.47■□□□□ 0.23
NEDD4L-228ENST00000590248 ERVK-24P63145 666 aa16.47■□□□□ 0.23
NEDD4L-228ENST00000590248 IRF5Q13568 498 aa16.47■□□□□ 0.23
NEDD4L-228ENST00000590248 ARPP21Q9UBL0 812 aaPredicted RBP16.47■□□□□ 0.23
NEDD4L-228ENST00000590248 PARP14Q460N5 1801 aa16.47■□□□□ 0.23
NEDD4L-228ENST00000590248 MYH4Q9Y623 1939 aa16.47■□□□□ 0.23
NEDD4L-228ENST00000590248 PATL2C9JE40 543 aaKnown RBP16.46■□□□□ 0.23
NEDD4L-228ENST00000590248 PDE1AP54750 535 aa16.46■□□□□ 0.23
NEDD4L-228ENST00000590248 UBXN2AP68543 259 aa16.46■□□□□ 0.23
NEDD4L-228ENST00000590248 ATP2B2Q01814 1243 aa16.46■□□□□ 0.23
NEDD4L-228ENST00000590248 SBK1Q52WX2 424 aa16.46■□□□□ 0.23
NEDD4L-228ENST00000590248 CCDC129Q6ZRS4 1044 aa16.46■□□□□ 0.23
NEDD4L-228ENST00000590248 IFNL3Q8IZI9 196 aa16.46■□□□□ 0.23
NEDD4L-228ENST00000590248 SPICE1Q8N0Z3 855 aa16.46■□□□□ 0.23
NEDD4L-228ENST00000590248 PXYLP1Q8TE99 480 aa16.46■□□□□ 0.23
NEDD4L-228ENST00000590248 CCDC17Q96LX7 622 aa16.46■□□□□ 0.23
NEDD4L-228ENST00000590248 COL11A1P12107 1806 aaPredicted RBP16.46■□□□□ 0.23
NEDD4L-228ENST00000590248 ZNFX1Q9P2E3 1918 aaKnown RBP16.45■□□□□ 0.22
NEDD4L-228ENST00000590248 EEF2P13639 858 aaKnown RBP16.45■□□□□ 0.22
NEDD4L-228ENST00000590248 TDO2P48775 406 aa16.45■□□□□ 0.22
NEDD4L-228ENST00000590248 ICA1Q05084 483 aa16.45■□□□□ 0.22
NEDD4L-228ENST00000590248 TRIM32Q13049 653 aa16.45■□□□□ 0.22
NEDD4L-228ENST00000590248 SHISA4Q96DD7 197 aa16.45■□□□□ 0.22
NEDD4L-228ENST00000590248 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.45■□□□□ 0.22
NEDD4L-228ENST00000590248 RWDD1Q9H446 243 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms