RNA–Protein interactions for RNA: ENST00000590034.2

SF3A2-205, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 3

Gene SF3A2, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-205ENST00000590034 EVX2Q03828 476 aa16.97■□□□□ 0.31
SF3A2-205ENST00000590034 CEP85Q6P2H3 762 aa16.97■□□□□ 0.31
SF3A2-205ENST00000590034 PLEKHH3Q7Z736 793 aa16.97■□□□□ 0.31
SF3A2-205ENST00000590034 FTSJ3Q8IY81 847 aaKnown RBP16.97■□□□□ 0.31
SF3A2-205ENST00000590034 ACER1Q8TDN7 264 aa16.97■□□□□ 0.31
SF3A2-205ENST00000590034 GTF3C2Q8WUA4 911 aaPredicted RBP16.97■□□□□ 0.31
SF3A2-205ENST00000590034 FEZ1Q99689 392 aa16.97■□□□□ 0.31
SF3A2-205ENST00000590034 APBA2Q99767 749 aa16.97■□□□□ 0.31
SF3A2-205ENST00000590034 RLFQ13129 1914 aa16.96■□□□□ 0.31
SF3A2-205ENST00000590034 VCAM1P19320 739 aa16.96■□□□□ 0.31
SF3A2-205ENST00000590034 SHMT1P34896 483 aa16.96■□□□□ 0.31
SF3A2-205ENST00000590034 RAB3GAP1Q15042 981 aa16.96■□□□□ 0.31
SF3A2-205ENST00000590034 TRMT44Q8IYL2 757 aaKnown RBP16.96■□□□□ 0.31
SF3A2-205ENST00000590034 RIOK1Q9BRS2 568 aaKnown RBP16.96■□□□□ 0.31
SF3A2-205ENST00000590034 FLRT1Q9NZU1 646 aa16.96■□□□□ 0.31
SF3A2-205ENST00000590034 EXOC6BQ9Y2D4 811 aa16.96■□□□□ 0.31
SF3A2-205ENST00000590034 USP17L15C9J2P7 530 aa16.95■□□□□ 0.3
SF3A2-205ENST00000590034 USP17L13C9JLJ4 530 aa16.95■□□□□ 0.3
SF3A2-205ENST00000590034 USP17L11C9JVI0 530 aa16.95■□□□□ 0.3
SF3A2-205ENST00000590034 USP17L18D6R9N7 530 aa16.95■□□□□ 0.3
SF3A2-205ENST00000590034 USP17L22D6RA61 530 aa16.95■□□□□ 0.3
SF3A2-205ENST00000590034 USP17L17D6RBQ6 530 aa16.95■□□□□ 0.3
SF3A2-205ENST00000590034 USP17L19D6RCP7 530 aa16.95■□□□□ 0.3
SF3A2-205ENST00000590034 USP17L20D6RJB6 530 aa16.95■□□□□ 0.3
SF3A2-205ENST00000590034 GUCY1A2P33402 732 aa16.95■□□□□ 0.3
SF3A2-205ENST00000590034 PLCD1P51178 756 aa16.95■□□□□ 0.3
SF3A2-205ENST00000590034 USP17L24Q0WX57 530 aa16.95■□□□□ 0.3
SF3A2-205ENST00000590034 MAP2K5Q13163 448 aa16.95■□□□□ 0.3
SF3A2-205ENST00000590034 CATSPERGQ6ZRH7 1159 aa16.95■□□□□ 0.3
SF3A2-205ENST00000590034 CERS3Q8IU89 383 aa16.95■□□□□ 0.3
SF3A2-205ENST00000590034 CCAR1Q8IX12 1150 aaKnown RBP16.95■□□□□ 0.3
SF3A2-205ENST00000590034 KIAA1683Q9H0B3 1180 aa16.95■□□□□ 0.3
SF3A2-205ENST00000590034 BTBD7Q9P203 1132 aa16.95■□□□□ 0.3
SF3A2-205ENST00000590034 RABGAP1Q9Y3P9 1069 aa16.95■□□□□ 0.3
SF3A2-205ENST00000590034 A0A0C4DFX4 3053 aa16.95■□□□□ 0.3
SF3A2-205ENST00000590034 A0A0G2JMZ2 1700 aa16.94■□□□□ 0.3
SF3A2-205ENST00000590034 LRRC26Q2I0M4 334 aa16.94■□□□□ 0.3
SF3A2-205ENST00000590034 ABCB5Q2M3G0 1257 aa16.94■□□□□ 0.3
SF3A2-205ENST00000590034 CERKLQ49MI3 558 aaPredicted RBP16.94■□□□□ 0.3
SF3A2-205ENST00000590034 AACSQ86V21 672 aa16.94■□□□□ 0.3
SF3A2-205ENST00000590034 SPDYE16A6NNV3 312 aaPredicted RBP16.93■□□□□ 0.3
SF3A2-205ENST00000590034 GABPAQ06546 454 aa16.93■□□□□ 0.3
SF3A2-205ENST00000590034 MAP3K12Q12852 859 aa16.93■□□□□ 0.3
SF3A2-205ENST00000590034 LBX2Q6XYB7 198 aa16.93■□□□□ 0.3
SF3A2-205ENST00000590034 Q7L0L9 218 aa16.93■□□□□ 0.3
SF3A2-205ENST00000590034 TTC6Q86TZ1 520 aa16.93■□□□□ 0.3
SF3A2-205ENST00000590034 MYH8P13535 1937 aa16.93■□□□□ 0.3
SF3A2-205ENST00000590034 ZNF236Q9UL36 1845 aa16.93■□□□□ 0.3
SF3A2-205ENST00000590034 CUL9Q8IWT3 2517 aa16.92■□□□□ 0.3
SF3A2-205ENST00000590034 PARP14Q460N5 1801 aa16.92■□□□□ 0.3
SF3A2-205ENST00000590034 PTPREP23469 700 aa16.92■□□□□ 0.3
SF3A2-205ENST00000590034 USP14P54578 494 aa16.92■□□□□ 0.3
SF3A2-205ENST00000590034 SEPT2Q15019 361 aa16.92■□□□□ 0.3
SF3A2-205ENST00000590034 LRIT3Q3SXY7 679 aa16.92■□□□□ 0.3
SF3A2-205ENST00000590034 WDR78Q5VTH9 848 aa16.92■□□□□ 0.3
SF3A2-205ENST00000590034 TDHQ8IZJ6 230 aa16.92■□□□□ 0.3
SF3A2-205ENST00000590034 EDC3Q96F86 508 aaKnown RBP16.92■□□□□ 0.3
SF3A2-205ENST00000590034 RPAP3Q9H6T3 665 aaPredicted RBP16.92■□□□□ 0.3
SF3A2-205ENST00000590034 IL1RAPL2Q9NP60 686 aa16.92■□□□□ 0.3
SF3A2-205ENST00000590034 LAMA2P24043 3122 aaKnown RBP16.92■□□□□ 0.3
SF3A2-205ENST00000590034 A0A1W2PRG0 241 aa16.91■□□□□ 0.3
SF3A2-205ENST00000590034 SLC15A5A6NIM6 579 aa16.91■□□□□ 0.3
SF3A2-205ENST00000590034 IGHA2P01877 340 aa16.91■□□□□ 0.3
SF3A2-205ENST00000590034 HOXC6P09630 235 aa16.91■□□□□ 0.3
SF3A2-205ENST00000590034 PDE6AP16499 860 aa16.91■□□□□ 0.3
SF3A2-205ENST00000590034 CCNA1P78396 465 aa16.91■□□□□ 0.3
SF3A2-205ENST00000590034 HNRNPUQ00839 825 aaKnown RBP eCLIP16.91■□□□□ 0.3
SF3A2-205ENST00000590034 GRB14Q14449 540 aa16.91■□□□□ 0.3
SF3A2-205ENST00000590034 GPR153Q6NV75 609 aa16.91■□□□□ 0.3
SF3A2-205ENST00000590034 SLC17A8Q8NDX2 589 aa16.91■□□□□ 0.3
SF3A2-205ENST00000590034 NPLOC4Q8TAT6 608 aa16.91■□□□□ 0.3
SF3A2-205ENST00000590034 PANK1Q8TE04 598 aa16.91■□□□□ 0.3
SF3A2-205ENST00000590034 CWC22Q9HCG8 908 aaKnown RBP16.91■□□□□ 0.3
SF3A2-205ENST00000590034 BAZ2AQ9UIF9 1905 aaKnown RBP16.91■□□□□ 0.3
SF3A2-205ENST00000590034 MAGEB6P1A0A0J9YX57 407 aa16.9■□□□□ 0.3
SF3A2-205ENST00000590034 TMED8Q6PL24 325 aaPredicted RBP16.9■□□□□ 0.3
SF3A2-205ENST00000590034 ERC1Q8IUD2 1116 aa16.9■□□□□ 0.3
SF3A2-205ENST00000590034 TRPV1Q8NER1 839 aa16.9■□□□□ 0.3
SF3A2-205ENST00000590034 RHPN1Q8TCX5 695 aa16.9■□□□□ 0.3
SF3A2-205ENST00000590034 UBE2OQ9C0C9 1292 aaKnown RBP16.9■□□□□ 0.3
SF3A2-205ENST00000590034 CABP5Q9NP86 173 aa16.9■□□□□ 0.3
SF3A2-205ENST00000590034 LTBP2Q14767 1821 aa16.9■□□□□ 0.3
SF3A2-205ENST00000590034 TCRBV5S4A2TA0A5A2 114 aa16.89■□□□□ 0.29
SF3A2-205ENST00000590034 GLRX3O76003 335 aaKnown RBP16.89■□□□□ 0.29
SF3A2-205ENST00000590034 POLR3DP05423 398 aaPredicted RBP16.89■□□□□ 0.29
SF3A2-205ENST00000590034 CYP2D6P10635 497 aa16.89■□□□□ 0.29
SF3A2-205ENST00000590034 CYP2C19P33261 490 aa16.89■□□□□ 0.29
SF3A2-205ENST00000590034 KIAA1755Q5JYT7 1200 aa16.89■□□□□ 0.29
SF3A2-205ENST00000590034 SLC9C2Q5TAH2 1124 aa16.89■□□□□ 0.29
SF3A2-205ENST00000590034 MFSD14CQ5VZR4 134 aa16.89■□□□□ 0.29
SF3A2-205ENST00000590034 DEFB123Q8N688 67 aa16.89■□□□□ 0.29
SF3A2-205ENST00000590034 SLC44A5Q8NCS7 719 aa16.89■□□□□ 0.29
SF3A2-205ENST00000590034 SDR42E1Q8WUS8 393 aa16.89■□□□□ 0.29
SF3A2-205ENST00000590034 DDX20Q9UHI6 824 aaKnown RBP16.89■□□□□ 0.29
SF3A2-205ENST00000590034 MDM2Q00987 491 aaPredicted RBP16.88■□□□□ 0.29
SF3A2-205ENST00000590034 CLEC10AQ8IUN9 316 aa16.88■□□□□ 0.29
SF3A2-205ENST00000590034 LCORLQ8N3X6 602 aa16.88■□□□□ 0.29
SF3A2-205ENST00000590034 MOV10L1Q9BXT6 1211 aaKnown RBP16.88■□□□□ 0.29
SF3A2-205ENST00000590034 DCP1AQ9NPI6 582 aaPredicted RBP16.88■□□□□ 0.29
SF3A2-205ENST00000590034 MCM9Q9NXL9 1143 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms