RNA–Protein interactions for RNA: ENST00000589964.1

CROCCP3-203, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 3 BASIC

Gene CROCCP3, Length 255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-203ENST00000589964 C19orf81C9J6K1 198 aa20.35■□□□□ 0.85
CROCCP3-203ENST00000589964 VCAM1P19320 739 aa20.35■□□□□ 0.85
CROCCP3-203ENST00000589964 GCLCP48506 637 aaPredicted RBP20.35■□□□□ 0.85
CROCCP3-203ENST00000589964 USP17L2Q6R6M4 530 aa20.35■□□□□ 0.85
CROCCP3-203ENST00000589964 UBE2Q1Q7Z7E8 422 aa20.35■□□□□ 0.85
CROCCP3-203ENST00000589964 CERS3Q8IU89 383 aa20.35■□□□□ 0.85
CROCCP3-203ENST00000589964 OSBP2Q969R2 916 aa20.35■□□□□ 0.85
CROCCP3-203ENST00000589964 C12orf42Q96LP6 360 aa20.35■□□□□ 0.85
CROCCP3-203ENST00000589964 FEZ1Q99689 392 aa20.35■□□□□ 0.85
CROCCP3-203ENST00000589964 PAGR1Q9BTK6 254 aa20.35■□□□□ 0.85
CROCCP3-203ENST00000589964 RNF208Q9H0X6 261 aa20.35■□□□□ 0.85
CROCCP3-203ENST00000589964 USP17L12C9JPN9 530 aa20.34■□□□□ 0.85
CROCCP3-203ENST00000589964 USP17L21D6R901 530 aa20.34■□□□□ 0.85
CROCCP3-203ENST00000589964 IRF5Q13568 498 aa20.34■□□□□ 0.85
CROCCP3-203ENST00000589964 SLAIN1Q8ND83 568 aa20.34■□□□□ 0.85
CROCCP3-203ENST00000589964 KIAA1683Q9H0B3 1180 aa20.34■□□□□ 0.85
CROCCP3-203ENST00000589964 GINM1Q9NU53 330 aa20.34■□□□□ 0.85
CROCCP3-203ENST00000589964 M0R2C6 588 aa20.33■□□□□ 0.85
CROCCP3-203ENST00000589964 MPHOSPH10O00566 681 aaKnown RBP20.33■□□□□ 0.85
CROCCP3-203ENST00000589964 PABPC4Q13310 644 aaKnown RBP eCLIP20.33■□□□□ 0.85
CROCCP3-203ENST00000589964 UBE3CQ15386 1083 aa20.33■□□□□ 0.85
CROCCP3-203ENST00000589964 C12orf60Q5U649 245 aa20.33■□□□□ 0.85
CROCCP3-203ENST00000589964 TMED8Q6PL24 325 aaPredicted RBP20.33■□□□□ 0.85
CROCCP3-203ENST00000589964 PI4K2BQ8TCG2 481 aa20.33■□□□□ 0.85
CROCCP3-203ENST00000589964 EPB41L4AQ9HCS5 686 aaPredicted RBP20.33■□□□□ 0.85
CROCCP3-203ENST00000589964 BTBD7Q9P203 1132 aa20.33■□□□□ 0.85
CROCCP3-203ENST00000589964 PCDH10Q9P2E7 1040 aa20.33■□□□□ 0.85
CROCCP3-203ENST00000589964 GJB1P08034 283 aa20.32■□□□□ 0.84
CROCCP3-203ENST00000589964 CTR9Q6PD62 1173 aa20.32■□□□□ 0.84
CROCCP3-203ENST00000589964 STK11IPQ8N1F8 1099 aa20.32■□□□□ 0.84
CROCCP3-203ENST00000589964 U2AF1L4Q8WU68 220 aaKnown RBP20.32■□□□□ 0.84
CROCCP3-203ENST00000589964 TRIB2Q92519 343 aa20.32■□□□□ 0.84
CROCCP3-203ENST00000589964 RPAP3Q9H6T3 665 aaPredicted RBP20.32■□□□□ 0.84
CROCCP3-203ENST00000589964 SLC4A4Q9Y6R1 1079 aa20.32■□□□□ 0.84
CROCCP3-203ENST00000589964 RLFQ13129 1914 aa20.31■□□□□ 0.84
CROCCP3-203ENST00000589964 GJA8P48165 433 aa20.31■□□□□ 0.84
CROCCP3-203ENST00000589964 ERVK-9P63128 1117 aa20.31■□□□□ 0.84
CROCCP3-203ENST00000589964 ERVK-24P63145 666 aa20.31■□□□□ 0.84
CROCCP3-203ENST00000589964 CCL14Q16627 93 aa20.31■□□□□ 0.84
CROCCP3-203ENST00000589964 KBTBD3Q8NAB2 608 aa20.31■□□□□ 0.84
CROCCP3-203ENST00000589964 COA7Q96BR5 231 aa20.31■□□□□ 0.84
CROCCP3-203ENST00000589964 STRBPQ96SI9 672 aaKnown RBP20.31■□□□□ 0.84
CROCCP3-203ENST00000589964 SEC62Q99442 399 aaKnown RBP20.31■□□□□ 0.84
CROCCP3-203ENST00000589964 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.31■□□□□ 0.84
CROCCP3-203ENST00000589964 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.31■□□□□ 0.84
CROCCP3-203ENST00000589964 SALL3Q9BXA9 1300 aa20.3■□□□□ 0.84
CROCCP3-203ENST00000589964 SPDYE16A6NNV3 312 aaPredicted RBP20.3■□□□□ 0.84
CROCCP3-203ENST00000589964 GSG1L2A8MUP6 293 aa20.3■□□□□ 0.84
CROCCP3-203ENST00000589964 SLC34A2O95436 690 aa20.3■□□□□ 0.84
CROCCP3-203ENST00000589964 CYP2B6P20813 491 aa20.3■□□□□ 0.84
CROCCP3-203ENST00000589964 CDK8P49336 464 aa20.3■□□□□ 0.84
CROCCP3-203ENST00000589964 CATSPERGQ6ZRH7 1159 aa20.3■□□□□ 0.84
CROCCP3-203ENST00000589964 GPRC5AQ8NFJ5 357 aa20.3■□□□□ 0.84
CROCCP3-203ENST00000589964 PXYLP1Q8TE99 480 aa20.3■□□□□ 0.84
CROCCP3-203ENST00000589964 DEFB118Q96PH6 123 aa20.3■□□□□ 0.84
CROCCP3-203ENST00000589964 SPICE1Q8N0Z3 855 aa20.29■□□□□ 0.84
CROCCP3-203ENST00000589964 DIS3LQ8TF46 1054 aaKnown RBP20.29■□□□□ 0.84
CROCCP3-203ENST00000589964 USP6NLQ92738 828 aa20.29■□□□□ 0.84
CROCCP3-203ENST00000589964 PAK6Q9NQU5 681 aaPredicted RBP20.29■□□□□ 0.84
CROCCP3-203ENST00000589964 ATP8A2Q9NTI2 1148 aa20.29■□□□□ 0.84
CROCCP3-203ENST00000589964 USP17L15C9J2P7 530 aa20.28■□□□□ 0.84
CROCCP3-203ENST00000589964 USP17L13C9JLJ4 530 aa20.28■□□□□ 0.84
CROCCP3-203ENST00000589964 USP17L11C9JVI0 530 aa20.28■□□□□ 0.84
CROCCP3-203ENST00000589964 USP17L18D6R9N7 530 aa20.28■□□□□ 0.84
CROCCP3-203ENST00000589964 USP17L22D6RA61 530 aa20.28■□□□□ 0.84
CROCCP3-203ENST00000589964 USP17L17D6RBQ6 530 aa20.28■□□□□ 0.84
CROCCP3-203ENST00000589964 USP17L19D6RCP7 530 aa20.28■□□□□ 0.84
CROCCP3-203ENST00000589964 USP17L20D6RJB6 530 aa20.28■□□□□ 0.84
CROCCP3-203ENST00000589964 UBXN2AP68543 259 aa20.28■□□□□ 0.84
CROCCP3-203ENST00000589964 USP17L24Q0WX57 530 aa20.28■□□□□ 0.84
CROCCP3-203ENST00000589964 C16orf86Q6ZW13 317 aa20.28■□□□□ 0.84
CROCCP3-203ENST00000589964 GPR142Q7Z601 462 aa20.28■□□□□ 0.84
CROCCP3-203ENST00000589964 CABP5Q9NP86 173 aa20.28■□□□□ 0.84
CROCCP3-203ENST00000589964 MYH8P13535 1937 aa20.27■□□□□ 0.84
CROCCP3-203ENST00000589964 H0YGN5 161 aa20.27■□□□□ 0.84
CROCCP3-203ENST00000589964 FOXP2O15409 715 aa20.27■□□□□ 0.84
CROCCP3-203ENST00000589964 MORN1Q5T089 497 aa20.27■□□□□ 0.84
CROCCP3-203ENST00000589964 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.27■□□□□ 0.84
CROCCP3-203ENST00000589964 RNF113AO15541 343 aaKnown RBP20.26■□□□□ 0.83
CROCCP3-203ENST00000589964 SGPL1O95470 568 aa20.26■□□□□ 0.83
CROCCP3-203ENST00000589964 MNX1P50219 401 aaPredicted RBP20.26■□□□□ 0.83
CROCCP3-203ENST00000589964 TMEM179Q6ZVK1 233 aa20.26■□□□□ 0.83
CROCCP3-203ENST00000589964 APPBP2Q92624 585 aa20.26■□□□□ 0.83
CROCCP3-203ENST00000589964 FLRT1Q9NZU1 646 aa20.26■□□□□ 0.83
CROCCP3-203ENST00000589964 A0A0G2JMZ2 1700 aa20.26■□□□□ 0.83
CROCCP3-203ENST00000589964 GREB1LQ9C091 1923 aaPredicted RBP20.25■□□□□ 0.83
CROCCP3-203ENST00000589964 GPAA1O43292 621 aa20.25■□□□□ 0.83
CROCCP3-203ENST00000589964 FARP2O94887 1054 aaPredicted RBP20.25■□□□□ 0.83
CROCCP3-203ENST00000589964 HMGCRP04035 888 aa20.25■□□□□ 0.83
CROCCP3-203ENST00000589964 ICA1Q05084 483 aa20.25■□□□□ 0.83
CROCCP3-203ENST00000589964 CCDC129Q6ZRS4 1044 aa20.25■□□□□ 0.83
CROCCP3-203ENST00000589964 CRISPLD2Q9H0B8 497 aa20.25■□□□□ 0.83
CROCCP3-203ENST00000589964 FBXO28Q9NVF7 368 aa20.25■□□□□ 0.83
CROCCP3-203ENST00000589964 RABGAP1Q9Y3P9 1069 aa20.25■□□□□ 0.83
CROCCP3-203ENST00000589964 ALPK3Q96L96 1907 aa20.25■□□□□ 0.83
CROCCP3-203ENST00000589964 EEF2P13639 858 aaKnown RBP20.24■□□□□ 0.83
CROCCP3-203ENST00000589964 RASA1P20936 1047 aa20.24■□□□□ 0.83
CROCCP3-203ENST00000589964 USP14P54578 494 aa20.24■□□□□ 0.83
CROCCP3-203ENST00000589964 MAP3K21Q5TCX8 1036 aa20.24■□□□□ 0.83
CROCCP3-203ENST00000589964 ATG4CQ96DT6 458 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms