RNA–Protein interactions for RNA: ENST00000589897.1

TPM4-211, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-211ENST00000589897 SMARCA5O60264 1052 aaPredicted RBP10.03□□□□□ -0.8
TPM4-211ENST00000589897 ELNP15502 786 aa10.03□□□□□ -0.8
TPM4-211ENST00000589897 ATP5JP18859 108 aa10.03□□□□□ -0.8
TPM4-211ENST00000589897 GCLCP48506 637 aaPredicted RBP10.03□□□□□ -0.8
TPM4-211ENST00000589897 MTMR2Q13614 643 aa10.03□□□□□ -0.8
TPM4-211ENST00000589897 TREML2Q5T2D2 321 aa10.03□□□□□ -0.8
TPM4-211ENST00000589897 ZSCAN25Q6NSZ9 544 aa10.03□□□□□ -0.8
TPM4-211ENST00000589897 AMOTL1Q8IY63 956 aa10.03□□□□□ -0.8
TPM4-211ENST00000589897 FAM161BQ96MY7 647 aa10.03□□□□□ -0.8
TPM4-211ENST00000589897 FEZ1Q99689 392 aa10.03□□□□□ -0.8
TPM4-211ENST00000589897 LBHD1Q9BQE6 289 aaPredicted RBP10.03□□□□□ -0.8
TPM4-211ENST00000589897 WDR18Q9BV38 432 aa10.03□□□□□ -0.8
TPM4-211ENST00000589897 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.03□□□□□ -0.8
TPM4-211ENST00000589897 HMX1Q9NP08 348 aaPredicted RBP10.03□□□□□ -0.8
TPM4-211ENST00000589897 MCM9Q9NXL9 1143 aa10.03□□□□□ -0.8
TPM4-211ENST00000589897 TAOK2Q9UL54 1235 aa10.03□□□□□ -0.8
TPM4-211ENST00000589897 ZBTB21Q9ULJ3 1066 aa10.03□□□□□ -0.8
TPM4-211ENST00000589897 ZSWIM8A7E2V4 1837 aa10.03□□□□□ -0.8
TPM4-211ENST00000589897 MGAMO43451 1857 aa10.02□□□□□ -0.8
TPM4-211ENST00000589897 GH2P01242 217 aa10.02□□□□□ -0.81
TPM4-211ENST00000589897 BACE1P56817 501 aa10.02□□□□□ -0.81
TPM4-211ENST00000589897 RRP1BQ14684 758 aaKnown RBP10.02□□□□□ -0.81
TPM4-211ENST00000589897 RAB3GAP1Q15042 981 aa10.02□□□□□ -0.81
TPM4-211ENST00000589897 CERKLQ49MI3 558 aaPredicted RBP10.02□□□□□ -0.81
TPM4-211ENST00000589897 METTL16Q86W50 562 aaKnown RBP10.02□□□□□ -0.81
TPM4-211ENST00000589897 CCAR1Q8IX12 1150 aaKnown RBP10.02□□□□□ -0.81
TPM4-211ENST00000589897 ANKRD13CQ8N6S4 541 aa10.02□□□□□ -0.81
TPM4-211ENST00000589897 DIS3LQ8TF46 1054 aaKnown RBP10.02□□□□□ -0.81
TPM4-211ENST00000589897 EDC3Q96F86 508 aaKnown RBP10.02□□□□□ -0.81
TPM4-211ENST00000589897 CDX2Q99626 313 aaPredicted RBP10.02□□□□□ -0.81
TPM4-211ENST00000589897 HAUS7Q99871 368 aa10.02□□□□□ -0.81
TPM4-211ENST00000589897 EHD4Q9H223 541 aa10.02□□□□□ -0.81
TPM4-211ENST00000589897 LAMA3Q16787 3333 aa10.02□□□□□ -0.81
TPM4-211ENST00000589897 SIPA1L1O43166 1804 aa10.01□□□□□ -0.81
TPM4-211ENST00000589897 MPHOSPH10O00566 681 aaKnown RBP10.01□□□□□ -0.81
TPM4-211ENST00000589897 ABCB5Q2M3G0 1257 aa10.01□□□□□ -0.81
TPM4-211ENST00000589897 SH3D19Q5HYK7 790 aa10.01□□□□□ -0.81
TPM4-211ENST00000589897 USP17L2Q6R6M4 530 aa10.01□□□□□ -0.81
TPM4-211ENST00000589897 RIOK1Q9BRS2 568 aaKnown RBP10.01□□□□□ -0.81
TPM4-211ENST00000589897 ASCC2Q9H1I8 757 aaPredicted RBP10.01□□□□□ -0.81
TPM4-211ENST00000589897 SEMA6BQ9H3T3 888 aa10.01□□□□□ -0.81
TPM4-211ENST00000589897 DNAJC18Q9H819 358 aa10.01□□□□□ -0.81
TPM4-211ENST00000589897 ARMT1Q9H993 441 aa10.01□□□□□ -0.81
TPM4-211ENST00000589897 CWC22Q9HCG8 908 aaKnown RBP10.01□□□□□ -0.81
TPM4-211ENST00000589897 ECHDC1Q9NTX5 307 aa10.01□□□□□ -0.81
TPM4-211ENST00000589897 NAV1Q8NEY1 1877 aa10□□□□□ -0.81
TPM4-211ENST00000589897 MBD4O95243 580 aa10□□□□□ -0.81
TPM4-211ENST00000589897 HMGCRP04035 888 aa10□□□□□ -0.81
TPM4-211ENST00000589897 ADD2P35612 726 aa10□□□□□ -0.81
TPM4-211ENST00000589897 PLCD1P51178 756 aa10□□□□□ -0.81
TPM4-211ENST00000589897 USP14P54578 494 aa10□□□□□ -0.81
TPM4-211ENST00000589897 ZYXQ15942 572 aaKnown RBP10□□□□□ -0.81
TPM4-211ENST00000589897 FAM110CQ1W6H9 321 aa10□□□□□ -0.81
TPM4-211ENST00000589897 TJAP1Q5JTD0 557 aa10□□□□□ -0.81
TPM4-211ENST00000589897 LCORLQ8N3X6 602 aa10□□□□□ -0.81
TPM4-211ENST00000589897 SDR42E1Q8WUS8 393 aa10□□□□□ -0.81
TPM4-211ENST00000589897 DCTPP1Q9H773 170 aa10□□□□□ -0.81
TPM4-211ENST00000589897 ATP8A2Q9NTI2 1148 aa10□□□□□ -0.81
TPM4-211ENST00000589897 OGDHLQ9ULD0 1010 aa10□□□□□ -0.81
TPM4-211ENST00000589897 LOC285556D6RIA3 1793 aa10□□□□□ -0.81
TPM4-211ENST00000589897 MYH7P12883 1935 aa9.99□□□□□ -0.81
TPM4-211ENST00000589897 TCRBV5S4A2TA0A5A2 114 aa9.99□□□□□ -0.81
TPM4-211ENST00000589897 HOXA7P31268 230 aaPredicted RBP9.99□□□□□ -0.81
TPM4-211ENST00000589897 RRP1P56182 461 aaKnown RBP9.99□□□□□ -0.81
TPM4-211ENST00000589897 JAG1P78504 1218 aa9.99□□□□□ -0.81
TPM4-211ENST00000589897 MDM2Q00987 491 aaPredicted RBP9.99□□□□□ -0.81
TPM4-211ENST00000589897 UBE3CQ15386 1083 aa9.99□□□□□ -0.81
TPM4-211ENST00000589897 LRRFIP1Q32MZ4 808 aaKnown RBP9.99□□□□□ -0.81
TPM4-211ENST00000589897 TATDN1Q6P1N9 297 aa9.99□□□□□ -0.81
TPM4-211ENST00000589897 DCP1AQ9NPI6 582 aaPredicted RBP9.99□□□□□ -0.81
TPM4-211ENST00000589897 SWAP70Q9UH65 585 aa9.99□□□□□ -0.81
TPM4-211ENST00000589897 SLC4A4Q9Y6R1 1079 aa9.99□□□□□ -0.81
TPM4-211ENST00000589897 MYH8P13535 1937 aa9.98□□□□□ -0.81
TPM4-211ENST00000589897 ERC2O15083 957 aa9.98□□□□□ -0.81
TPM4-211ENST00000589897 HOXD11P31277 338 aaPredicted RBP9.98□□□□□ -0.81
TPM4-211ENST00000589897 HERVK_113P62684 666 aa9.98□□□□□ -0.81
TPM4-211ENST00000589897 SHROOM1Q2M3G4 852 aaPredicted RBP9.98□□□□□ -0.81
TPM4-211ENST00000589897 GPRC5AQ8NFJ5 357 aa9.98□□□□□ -0.81
TPM4-211ENST00000589897 GTF3C2Q8WUA4 911 aaPredicted RBP9.98□□□□□ -0.81
TPM4-211ENST00000589897 P2RX7Q99572 595 aaKnown RBP9.98□□□□□ -0.81
TPM4-211ENST00000589897 PAGR1Q9BTK6 254 aa9.98□□□□□ -0.81
TPM4-211ENST00000589897 PRKAG2Q9UGJ0 569 aa9.98□□□□□ -0.81
TPM4-211ENST00000589897 TMEM265A0A087WTH1 108 aa9.97□□□□□ -0.81
TPM4-211ENST00000589897 USP17L15C9J2P7 530 aa9.97□□□□□ -0.81
TPM4-211ENST00000589897 USP17L13C9JLJ4 530 aa9.97□□□□□ -0.81
TPM4-211ENST00000589897 USP17L11C9JVI0 530 aa9.97□□□□□ -0.81
TPM4-211ENST00000589897 USP17L18D6R9N7 530 aa9.97□□□□□ -0.81
TPM4-211ENST00000589897 USP17L22D6RA61 530 aa9.97□□□□□ -0.81
TPM4-211ENST00000589897 USP17L17D6RBQ6 530 aa9.97□□□□□ -0.81
TPM4-211ENST00000589897 USP17L19D6RCP7 530 aa9.97□□□□□ -0.81
TPM4-211ENST00000589897 USP17L20D6RJB6 530 aa9.97□□□□□ -0.81
TPM4-211ENST00000589897 PRKAB2O43741 272 aa9.97□□□□□ -0.81
TPM4-211ENST00000589897 FOSL2P15408 326 aa9.97□□□□□ -0.81
TPM4-211ENST00000589897 SHMT1P34896 483 aa9.97□□□□□ -0.81
TPM4-211ENST00000589897 USP17L24Q0WX57 530 aa9.97□□□□□ -0.81
TPM4-211ENST00000589897 SLFNL1Q499Z3 407 aa9.97□□□□□ -0.81
TPM4-211ENST00000589897 KIAA1683Q9H0B3 1180 aa9.97□□□□□ -0.81
TPM4-211ENST00000589897 EMILIN3Q9NT22 766 aa9.97□□□□□ -0.81
TPM4-211ENST00000589897 ARIH1Q9Y4X5 557 aaPredicted RBP9.97□□□□□ -0.81
TPM4-211ENST00000589897 BAZ2AQ9UIF9 1905 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms