RNA–Protein interactions for RNA: ENST00000589759.1

ATP6V0A1-223, Transcript of ATPase H+ transporting V0 subunit a1, human

TSL 3

Gene ATP6V0A1, Length 502 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP6V0A1-223	ENST00000589759	PABPC4	Q13310	644 aa	Known RBP eCLIP	5.8	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	MYBPC3	Q14896	1274 aa		5.8	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	KIAA0753	Q2KHM9	967 aa		5.8	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	CMPK2	Q5EBM0	449 aa		5.8	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	LARP1B	Q659C4	914 aa	Known RBP	5.8	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	ATL3	Q6DD88	541 aa		5.8	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	KDM7A	Q6ZMT4	941 aa		5.8	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	CCDC121	Q6ZUS5	278 aa		5.8	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	ARHGEF25	Q86VW2	580 aa		5.8	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	FAM114A1	Q8IWE2	563 aa		5.8	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	CCDC83	Q8IWF9	413 aa		5.8	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	KIRREL3	Q8IZU9	778 aa		5.8	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	GBP7	Q8N8V2	638 aa	Predicted RBP	5.8	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	C1orf131	Q8NDD1	294 aa	Known RBP	5.8	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	ENGASE	Q8NFI3	743 aa		5.8	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	ZNF473	Q8WTR7	871 aa	Known RBP	5.8	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	HDAC7	Q8WUI4	952 aa		5.8	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	CUL5	Q93034	780 aa		5.8	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	ZWILCH	Q9H900	591 aa		5.8	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	NOD2	Q9HC29	1040 aa		5.8	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	TRPV5	Q9NQA5	729 aa		5.8	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	UTP6	Q9NYH9	597 aa	Known RBP	5.8	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	ANKIB1	Q9P2G1	1089 aa		5.8	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	MYO1A	Q9UBC5	1043 aa		5.8	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	CFDP1	Q9UEE9	299 aa	Predicted RBP	5.8	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	STAP2	Q9UGK3	403 aa		5.8	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	PUF60	Q9UHX1	559 aa	Known RBP	5.8	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	CFAP45	Q9UL16	551 aa		5.8	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	PHF24	Q9UPV7	400 aa		5.8	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	WDR37	Q9Y2I8	494 aa		5.8	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	RIPOR2	Q9Y4F9	1068 aa		5.8	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	ARHGEF28	Q8N1W1	1705 aa	Known RBP	5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	PARP4	Q9UKK3	1724 aa	Known RBP	5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	AGL	P35573	1532 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	UBN2	Q6ZU65	1347 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	SYNRG	Q9UMZ2	1314 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	MAP2	P11137	1827 aa	Known RBP	5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	ECM29	Q5VYK3	1845 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	DEPDC5	O75140	1603 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	GPR75-ASB3	A0A0A6YYF3	556 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	CTAGE9	A4FU28	777 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	RASSF10	A6NK89	507 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	KIF5C	O60282	957 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	ATP6V1G1	O75348	118 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	VAMP4	O75379	141 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	FAM107A	O95990	144 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	GSTA1	P08263	222 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	RHOXF2B	P0C7M4	288 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	U2AF1L5	P0DN76	240 aa	Predicted RBP	5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	TOP1	P11387	765 aa	Known RBP	5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	ZNF24	P17028	368 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	ATP4A	P20648	1035 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	PAX3	P23760	479 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	PSMC4	P43686	418 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	GJA8	P48165	433 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	CCNG1	P51959	295 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	U2AF1	Q01081	240 aa	Known RBP eCLIP	5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	APBA1	Q02410	837 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	LMNB2	Q03252	620 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	MYO1E	Q12965	1108 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	REST	Q13127	1097 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	LBR	Q14739	615 aa	Known RBP	5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	NCAPH	Q15003	741 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	PTGIS	Q16647	500 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	ME3	Q16798	604 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	SGSM1	Q2NKQ1	1148 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	ACCSL	Q4AC99	568 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	ANKRD20A8P	Q5CZ79	823 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	RBM26	Q5T8P6	1007 aa	Known RBP	5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	RNF187	Q5TA31	235 aa	Predicted RBP	5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	SFMBT2	Q5VUG0	894 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	NUTM2G	Q5VZR2	741 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	ALS2CL	Q60I27	953 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	NUGGC	Q68CJ6	796 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	THSD4	Q6ZMP0	1018 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	LCA5	Q86VQ0	697 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	SNRNP27	Q8WVK2	155 aa	Known RBP	5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	JAKMIP2	Q96AA8	810 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	ZNF570	Q96NI8	536 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	ARPC5L	Q9BPX5	153 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	RHOXF2	Q9BQY4	288 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	NUP58	Q9BVL2	599 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	YIPF2	Q9BWQ6	316 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	EHD4	Q9H223	541 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	HAUS2	Q9NVX0	235 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	CWC25	Q9NXE8	425 aa	Predicted RBP	5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	NOP53	Q9NZM5	478 aa	Known RBP	5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	WDR35	Q9P2L0	1181 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	TMCO1	Q9UM00	188 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	G3BP2	Q9UN86	482 aa	Known RBP	5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	ZNF510	Q9Y2H8	683 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	ASB3	Q9Y575	518 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	MYO5A	Q9Y4I1	1855 aa	Known RBP	5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	SBNO1	A3KN83	1393 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	ADGRB3	O60242	1522 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	ATP7A	Q04656	1500 aa		5.79	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	STRC	Q7RTU9	1775 aa		5.78	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	MYH6	P13533	1939 aa		5.78	□□□□□ -1.48
ATP6V0A1-223	ENST00000589759	NUTM2F	A1L443	756 aa		5.78	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms