RNA–Protein interactions for RNA: ENST00000589532.5

LSM7-205, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 3

Gene LSM7, Length 539 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM7-205	ENST00000589532	MAP3K21	Q5TCX8	1036 aa		28.81	■■■□□ 2.2
LSM7-205	ENST00000589532	LCORL	Q8N3X6	602 aa		28.81	■■■□□ 2.2
LSM7-205	ENST00000589532	USP6NL	Q92738	828 aa		28.81	■■■□□ 2.2
LSM7-205	ENST00000589532	PORCN	Q9H237	461 aa		28.81	■■■□□ 2.2
LSM7-205	ENST00000589532	CNMD	O75829	334 aa		28.8	■■■□□ 2.2
LSM7-205	ENST00000589532	ABCB5	Q2M3G0	1257 aa		28.8	■■■□□ 2.2
LSM7-205	ENST00000589532		Q3C1V9	767 aa		28.8	■■■□□ 2.2
LSM7-205	ENST00000589532	ACER1	Q8TDN7	264 aa		28.8	■■■□□ 2.2
LSM7-205	ENST00000589532	SOCS4	Q8WXH5	440 aa		28.8	■■■□□ 2.2
LSM7-205	ENST00000589532	CRNKL1	Q9BZJ0	848 aa	Known RBP	28.8	■■■□□ 2.2
LSM7-205	ENST00000589532	PRO3102	Q9H379	93 aa		28.8	■■■□□ 2.2
LSM7-205	ENST00000589532	VCAM1	P19320	739 aa		28.79	■■■□□ 2.2
LSM7-205	ENST00000589532	C20orf194	Q5TEA3	1177 aa		28.79	■■■□□ 2.2
LSM7-205	ENST00000589532	DPF3	Q92784	378 aa		28.79	■■■□□ 2.2
LSM7-205	ENST00000589532	DCP1A	Q9NPI6	582 aa	Predicted RBP	28.79	■■■□□ 2.2
LSM7-205	ENST00000589532	MYH8	P13535	1937 aa		28.79	■■■□□ 2.2
LSM7-205	ENST00000589532	RLF	Q13129	1914 aa		28.79	■■■□□ 2.2
LSM7-205	ENST00000589532	RPTOR	Q8N122	1335 aa		28.78	■■■□□ 2.2
LSM7-205	ENST00000589532	XRCC5	P13010	732 aa	Known RBP	28.78	■■■□□ 2.2
LSM7-205	ENST00000589532	ATP5J	P18859	108 aa		28.78	■■■□□ 2.2
LSM7-205	ENST00000589532	MAPK4	P31152	587 aa		28.78	■■■□□ 2.2
LSM7-205	ENST00000589532	RRP1	P56182	461 aa	Known RBP	28.78	■■■□□ 2.2
LSM7-205	ENST00000589532	RAB3GAP1	Q15042	981 aa		28.78	■■■□□ 2.2
LSM7-205	ENST00000589532	ZYX	Q15942	572 aa	Known RBP	28.78	■■■□□ 2.2
LSM7-205	ENST00000589532	SDR42E1	Q8WUS8	393 aa		28.78	■■■□□ 2.2
LSM7-205	ENST00000589532	FEZ1	Q99689	392 aa		28.78	■■■□□ 2.2
LSM7-205	ENST00000589532	BAZ2A	Q9UIF9	1905 aa	Known RBP	28.77	■■■□□ 2.2
LSM7-205	ENST00000589532	ADD2	P35612	726 aa		28.77	■■■□□ 2.2
LSM7-205	ENST00000589532	USP14	P54578	494 aa		28.77	■■■□□ 2.2
LSM7-205	ENST00000589532	CHRDL2	Q6WN34	429 aa		28.77	■■■□□ 2.2
LSM7-205	ENST00000589532	LBX2	Q6XYB7	198 aa		28.77	■■■□□ 2.2
LSM7-205	ENST00000589532	GPR142	Q7Z601	462 aa		28.77	■■■□□ 2.2
LSM7-205	ENST00000589532	PAG1	Q9NWQ8	432 aa		28.77	■■■□□ 2.2
LSM7-205	ENST00000589532	USP17L15	C9J2P7	530 aa		28.76	■■■□□ 2.19
LSM7-205	ENST00000589532	USP17L13	C9JLJ4	530 aa		28.76	■■■□□ 2.19
LSM7-205	ENST00000589532	USP17L11	C9JVI0	530 aa		28.76	■■■□□ 2.19
LSM7-205	ENST00000589532	USP17L18	D6R9N7	530 aa		28.76	■■■□□ 2.19
LSM7-205	ENST00000589532	USP17L22	D6RA61	530 aa		28.76	■■■□□ 2.19
LSM7-205	ENST00000589532	USP17L17	D6RBQ6	530 aa		28.76	■■■□□ 2.19
LSM7-205	ENST00000589532	USP17L19	D6RCP7	530 aa		28.76	■■■□□ 2.19
LSM7-205	ENST00000589532	USP17L20	D6RJB6	530 aa		28.76	■■■□□ 2.19
LSM7-205	ENST00000589532	MNX1	P50219	401 aa	Predicted RBP	28.76	■■■□□ 2.19
LSM7-205	ENST00000589532	USP17L24	Q0WX57	530 aa		28.76	■■■□□ 2.19
LSM7-205	ENST00000589532	SLFNL1	Q499Z3	407 aa		28.76	■■■□□ 2.19
LSM7-205	ENST00000589532	MORN1	Q5T089	497 aa		28.76	■■■□□ 2.19
LSM7-205	ENST00000589532	CATSPERG	Q6ZRH7	1159 aa		28.76	■■■□□ 2.19
LSM7-205	ENST00000589532	DIS3L	Q8TF46	1054 aa	Known RBP	28.76	■■■□□ 2.19
LSM7-205	ENST00000589532	NUDT12	Q9BQG2	462 aa		28.76	■■■□□ 2.19
LSM7-205	ENST00000589532	PAGR1	Q9BTK6	254 aa		28.76	■■■□□ 2.19
LSM7-205	ENST00000589532	MCM9	Q9NXL9	1143 aa		28.76	■■■□□ 2.19
LSM7-205	ENST00000589532	TFRC	P02786	760 aa	Known RBP	28.75	■■■□□ 2.19
LSM7-205	ENST00000589532	POLR3D	P05423	398 aa	Predicted RBP	28.75	■■■□□ 2.19
LSM7-205	ENST00000589532	CYP2B6	P20813	491 aa		28.75	■■■□□ 2.19
LSM7-205	ENST00000589532	ANKLE1	Q8NAG6	615 aa		28.75	■■■□□ 2.19
LSM7-205	ENST00000589532	HAUS7	Q99871	368 aa		28.75	■■■□□ 2.19
LSM7-205	ENST00000589532	RABGAP1	Q9Y3P9	1069 aa		28.75	■■■□□ 2.19
LSM7-205	ENST00000589532	FRMPD3	Q5JV73	1810 aa		28.75	■■■□□ 2.19
LSM7-205	ENST00000589532	ZNF236	Q9UL36	1845 aa		28.74	■■■□□ 2.19
LSM7-205	ENST00000589532	CHGB	P05060	677 aa		28.74	■■■□□ 2.19
LSM7-205	ENST00000589532	CYP2D6	P10635	497 aa		28.74	■■■□□ 2.19
LSM7-205	ENST00000589532	SEPT2	Q15019	361 aa		28.74	■■■□□ 2.19
LSM7-205	ENST00000589532	PAWR	Q96IZ0	340 aa	Known RBP	28.74	■■■□□ 2.19
LSM7-205	ENST00000589532	BOLA2	Q9H3K6	86 aa		28.74	■■■□□ 2.19
LSM7-205	ENST00000589532	ARMT1	Q9H993	441 aa		28.74	■■■□□ 2.19
LSM7-205	ENST00000589532	HMX1	Q9NP08	348 aa	Predicted RBP	28.74	■■■□□ 2.19
LSM7-205	ENST00000589532	CABP5	Q9NP86	173 aa		28.74	■■■□□ 2.19
LSM7-205	ENST00000589532	PARP14	Q460N5	1801 aa		28.73	■■■□□ 2.19
LSM7-205	ENST00000589532		A0A1W2PRG0	241 aa		28.73	■■■□□ 2.19
LSM7-205	ENST00000589532	SLC44A5	Q8NCS7	719 aa		28.73	■■■□□ 2.19
LSM7-205	ENST00000589532	SPDYE16	A6NNV3	312 aa	Predicted RBP	28.72	■■■□□ 2.19
LSM7-205	ENST00000589532	MBD4	O95243	580 aa		28.72	■■■□□ 2.19
LSM7-205	ENST00000589532	PRKAR2A	P13861	404 aa	Known RBP	28.72	■■■□□ 2.19
LSM7-205	ENST00000589532	PLEKHH3	Q7Z736	793 aa		28.72	■■■□□ 2.19
LSM7-205	ENST00000589532	RBM27	Q9P2N5	1060 aa	Known RBP	28.72	■■■□□ 2.19
LSM7-205	ENST00000589532	OGDHL	Q9ULD0	1010 aa		28.72	■■■□□ 2.19
LSM7-205	ENST00000589532	PRKAB2	O43741	272 aa		28.71	■■■□□ 2.19
LSM7-205	ENST00000589532	CCL14	Q16627	93 aa		28.71	■■■□□ 2.19
LSM7-205	ENST00000589532	APBA2	Q99767	749 aa		28.71	■■■□□ 2.19
LSM7-205	ENST00000589532	BTBD7	Q9P203	1132 aa		28.71	■■■□□ 2.19
LSM7-205	ENST00000589532	RGS2	P41220	211 aa		28.7	■■■□□ 2.18
LSM7-205	ENST00000589532	TRMT44	Q8IYL2	757 aa	Known RBP	28.7	■■■□□ 2.18
LSM7-205	ENST00000589532	RPAP3	Q9H6T3	665 aa	Predicted RBP	28.7	■■■□□ 2.18
LSM7-205	ENST00000589532	NR2E3	Q9Y5X4	410 aa		28.7	■■■□□ 2.18
LSM7-205	ENST00000589532	GREB1L	Q9C091	1923 aa	Predicted RBP	28.69	■■■□□ 2.18
LSM7-205	ENST00000589532	SMIM22	K7EJ46	135 aa		28.69	■■■□□ 2.18
LSM7-205	ENST00000589532	ZKSCAN1	P17029	563 aa	Predicted RBP	28.69	■■■□□ 2.18
LSM7-205	ENST00000589532	UBE3C	Q15386	1083 aa		28.69	■■■□□ 2.18
LSM7-205	ENST00000589532	NECAB2	Q7Z6G3	386 aa		28.69	■■■□□ 2.18
LSM7-205	ENST00000589532	DYNLL2	Q96FJ2	89 aa		28.69	■■■□□ 2.18
LSM7-205	ENST00000589532	LRRCC1	Q9C099	1032 aa		28.69	■■■□□ 2.18
LSM7-205	ENST00000589532	ATP8A2	Q9NTI2	1148 aa		28.69	■■■□□ 2.18
LSM7-205	ENST00000589532	SWAP70	Q9UH65	585 aa		28.69	■■■□□ 2.18
LSM7-205	ENST00000589532	CACNB2	Q08289	660 aa	Predicted RBP	28.68	■■■□□ 2.18
LSM7-205	ENST00000589532	TMEM179	Q6ZVK1	233 aa		28.68	■■■□□ 2.18
LSM7-205	ENST00000589532	DNAH12	Q6ZR08	3092 aa		28.67	■■■□□ 2.18
LSM7-205	ENST00000589532	MAP2K5	Q13163	448 aa		28.67	■■■□□ 2.18
LSM7-205	ENST00000589532	KIAA1755	Q5JYT7	1200 aa		28.67	■■■□□ 2.18
LSM7-205	ENST00000589532	SIAH1	Q8IUQ4	282 aa		28.67	■■■□□ 2.18
LSM7-205	ENST00000589532	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	28.67	■■■□□ 2.18
LSM7-205	ENST00000589532	BCL11A	Q9H165	835 aa		28.67	■■■□□ 2.18

Retrieved 100 of 20,778 RNA–protein pairs in 64 ms