RNA–Protein interactions for RNA: ENST00000589420.1

ZNF397-206, Transcript of zinc finger protein 397, humanhuman

TSL 1 (best)

Gene ZNF397, Length 1,025 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF397-206ENST00000589420 KIAA1683Q9H0B3 1180 aa13.36□□□□□ -0.27
ZNF397-206ENST00000589420 RBM27Q9P2N5 1060 aaKnown RBP13.36□□□□□ -0.27
ZNF397-206ENST00000589420 DDX19BQ9UMR2 479 aa13.36□□□□□ -0.27
ZNF397-206ENST00000589420 RANBP2P49792 3224 aaKnown RBP13.36□□□□□ -0.27
ZNF397-206ENST00000589420 USP17L15C9J2P7 530 aa13.35□□□□□ -0.27
ZNF397-206ENST00000589420 USP17L13C9JLJ4 530 aa13.35□□□□□ -0.27
ZNF397-206ENST00000589420 USP17L11C9JVI0 530 aa13.35□□□□□ -0.27
ZNF397-206ENST00000589420 USP17L18D6R9N7 530 aa13.35□□□□□ -0.27
ZNF397-206ENST00000589420 USP17L22D6RA61 530 aa13.35□□□□□ -0.27
ZNF397-206ENST00000589420 USP17L17D6RBQ6 530 aa13.35□□□□□ -0.27
ZNF397-206ENST00000589420 USP17L19D6RCP7 530 aa13.35□□□□□ -0.27
ZNF397-206ENST00000589420 USP17L20D6RJB6 530 aa13.35□□□□□ -0.27
ZNF397-206ENST00000589420 IFIT2P09913 472 aaKnown RBP13.35□□□□□ -0.27
ZNF397-206ENST00000589420 PDE6AP16499 860 aa13.35□□□□□ -0.27
ZNF397-206ENST00000589420 USP17L24Q0WX57 530 aa13.35□□□□□ -0.27
ZNF397-206ENST00000589420 RAB3GAP1Q15042 981 aa13.35□□□□□ -0.27
ZNF397-206ENST00000589420 SLC9C2Q5TAH2 1124 aa13.35□□□□□ -0.27
ZNF397-206ENST00000589420 MAP3K21Q5TCX8 1036 aa13.35□□□□□ -0.27
ZNF397-206ENST00000589420 TRIB2Q92519 343 aa13.35□□□□□ -0.27
ZNF397-206ENST00000589420 PAGR1Q9BTK6 254 aa13.35□□□□□ -0.27
ZNF397-206ENST00000589420 CRNKL1Q9BZJ0 848 aaKnown RBP13.35□□□□□ -0.27
ZNF397-206ENST00000589420 CHMP4BQ9H444 224 aaKnown RBP13.35□□□□□ -0.27
ZNF397-206ENST00000589420 CABP5Q9NP86 173 aa13.35□□□□□ -0.27
ZNF397-206ENST00000589420 MYH1P12882 1939 aa13.35□□□□□ -0.27
ZNF397-206ENST00000589420 PEX10O60683 326 aa13.34□□□□□ -0.27
ZNF397-206ENST00000589420 RAB11FIP3O75154 756 aa13.34□□□□□ -0.27
ZNF397-206ENST00000589420 POLR3DP05423 398 aaPredicted RBP13.34□□□□□ -0.27
ZNF397-206ENST00000589420 SHMT1P34896 483 aa13.34□□□□□ -0.27
ZNF397-206ENST00000589420 RGS2P41220 211 aa13.34□□□□□ -0.27
ZNF397-206ENST00000589420 PLCD1P51178 756 aa13.34□□□□□ -0.27
ZNF397-206ENST00000589420 CCNA1P78396 465 aa13.34□□□□□ -0.27
ZNF397-206ENST00000589420 TRIM32Q13049 653 aa13.34□□□□□ -0.27
ZNF397-206ENST00000589420 Q3C1V9 767 aa13.34□□□□□ -0.27
ZNF397-206ENST00000589420 GPR142Q7Z601 462 aa13.34□□□□□ -0.27
ZNF397-206ENST00000589420 PLEKHH3Q7Z736 793 aa13.34□□□□□ -0.27
ZNF397-206ENST00000589420 USP6NLQ92738 828 aa13.34□□□□□ -0.27
ZNF397-206ENST00000589420 PORCNQ9H237 461 aa13.34□□□□□ -0.27
ZNF397-206ENST00000589420 PRO3102Q9H379 93 aa13.34□□□□□ -0.27
ZNF397-206ENST00000589420 ZBTB40Q9NUA8 1239 aa13.34□□□□□ -0.27
ZNF397-206ENST00000589420 RABGAP1Q9Y3P9 1069 aa13.34□□□□□ -0.27
ZNF397-206ENST00000589420 APBB1O00213 710 aa13.33□□□□□ -0.28
ZNF397-206ENST00000589420 GOLIM4O00461 696 aa13.33□□□□□ -0.28
ZNF397-206ENST00000589420 GLRX3O76003 335 aaKnown RBP13.33□□□□□ -0.28
ZNF397-206ENST00000589420 PRKAR2AP13861 404 aaKnown RBP13.33□□□□□ -0.28
ZNF397-206ENST00000589420 ZKSCAN1P17029 563 aaPredicted RBP13.33□□□□□ -0.28
ZNF397-206ENST00000589420 VCAM1P19320 739 aa13.33□□□□□ -0.28
ZNF397-206ENST00000589420 GABPAQ06546 454 aa13.33□□□□□ -0.28
ZNF397-206ENST00000589420 ZYXQ15942 572 aaKnown RBP13.33□□□□□ -0.28
ZNF397-206ENST00000589420 MORN1Q5T089 497 aa13.33□□□□□ -0.28
ZNF397-206ENST00000589420 POTEEQ6S8J3 1075 aa13.33□□□□□ -0.28
ZNF397-206ENST00000589420 CATSPERGQ6ZRH7 1159 aa13.33□□□□□ -0.28
ZNF397-206ENST00000589420 ACER1Q8TDN7 264 aa13.33□□□□□ -0.28
ZNF397-206ENST00000589420 DIS3LQ8TF46 1054 aaKnown RBP13.33□□□□□ -0.28
ZNF397-206ENST00000589420 DNAJC2Q99543 621 aaKnown RBP13.33□□□□□ -0.28
ZNF397-206ENST00000589420 NBPF3Q9H094 633 aa13.33□□□□□ -0.28
ZNF397-206ENST00000589420 CWC22Q9HCG8 908 aaKnown RBP13.33□□□□□ -0.28
ZNF397-206ENST00000589420 MCM9Q9NXL9 1143 aa13.33□□□□□ -0.28
ZNF397-206ENST00000589420 OGDHLQ9ULD0 1010 aa13.33□□□□□ -0.28
ZNF397-206ENST00000589420 COG6Q9Y2V7 657 aa13.33□□□□□ -0.28
ZNF397-206ENST00000589420 ZNF532Q9HCE3 1301 aa13.33□□□□□ -0.28
ZNF397-206ENST00000589420 PLXNB2O15031 1838 aa13.32□□□□□ -0.28
ZNF397-206ENST00000589420 A0A1W2PPC1 479 aa13.32□□□□□ -0.28
ZNF397-206ENST00000589420 TCRBV5S4A2TA0A5A2 114 aa13.32□□□□□ -0.28
ZNF397-206ENST00000589420 LBX2Q6XYB7 198 aa13.32□□□□□ -0.28
ZNF397-206ENST00000589420 SIRT2Q8IXJ6 389 aa13.32□□□□□ -0.28
ZNF397-206ENST00000589420 APBA2Q99767 749 aa13.32□□□□□ -0.28
ZNF397-206ENST00000589420 CNMDO75829 334 aa13.31□□□□□ -0.28
ZNF397-206ENST00000589420 GUCY1A2P33402 732 aa13.31□□□□□ -0.28
ZNF397-206ENST00000589420 MNX1P50219 401 aaPredicted RBP13.31□□□□□ -0.28
ZNF397-206ENST00000589420 MAP2K5Q13163 448 aa13.31□□□□□ -0.28
ZNF397-206ENST00000589420 SEPT2Q15019 361 aa13.31□□□□□ -0.28
ZNF397-206ENST00000589420 LCORLQ8N3X6 602 aa13.31□□□□□ -0.28
ZNF397-206ENST00000589420 C11orf49Q9H6J7 331 aa13.31□□□□□ -0.28
ZNF397-206ENST00000589420 RPAP3Q9H6T3 665 aaPredicted RBP13.31□□□□□ -0.28
ZNF397-206ENST00000589420 DCP1AQ9NPI6 582 aaPredicted RBP13.31□□□□□ -0.28
ZNF397-206ENST00000589420 SZT2Q5T011 3432 aa13.3□□□□□ -0.28
ZNF397-206ENST00000589420 DDX60LQ5H9U9 1706 aaKnown RBP13.3□□□□□ -0.28
ZNF397-206ENST00000589420 MPHOSPH10O00566 681 aaKnown RBP13.3□□□□□ -0.28
ZNF397-206ENST00000589420 ATP5JP18859 108 aa13.3□□□□□ -0.28
ZNF397-206ENST00000589420 CACNB2Q08289 660 aaPredicted RBP13.3□□□□□ -0.28
ZNF397-206ENST00000589420 CCL14Q16627 93 aa13.3□□□□□ -0.28
ZNF397-206ENST00000589420 SDR42E1Q8WUS8 393 aa13.3□□□□□ -0.28
ZNF397-206ENST00000589420 EDC3Q96F86 508 aaKnown RBP13.3□□□□□ -0.28
ZNF397-206ENST00000589420 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.3□□□□□ -0.28
ZNF397-206ENST00000589420 PAG1Q9NWQ8 432 aa13.3□□□□□ -0.28
ZNF397-206ENST00000589420 SWAP70Q9UH65 585 aa13.3□□□□□ -0.28
ZNF397-206ENST00000589420 NAV1Q8NEY1 1877 aa13.29□□□□□ -0.28
ZNF397-206ENST00000589420 SLC15A5A6NIM6 579 aa13.29□□□□□ -0.28
ZNF397-206ENST00000589420 SPDYE16A6NNV3 312 aaPredicted RBP13.29□□□□□ -0.28
ZNF397-206ENST00000589420 PTPREP23469 700 aa13.29□□□□□ -0.28
ZNF397-206ENST00000589420 ADD2P35612 726 aa13.29□□□□□ -0.28
ZNF397-206ENST00000589420 WDR78Q5VTH9 848 aa13.29□□□□□ -0.28
ZNF397-206ENST00000589420 MFSD14CQ5VZR4 134 aa13.29□□□□□ -0.28
ZNF397-206ENST00000589420 TMEM179Q6ZVK1 233 aa13.29□□□□□ -0.28
ZNF397-206ENST00000589420 C7orf61Q8IZ16 206 aa13.29□□□□□ -0.28
ZNF397-206ENST00000589420 HAUS7Q99871 368 aa13.29□□□□□ -0.28
ZNF397-206ENST00000589420 BCL11AQ9H165 835 aa13.29□□□□□ -0.28
ZNF397-206ENST00000589420 BOLA2Q9H3K6 86 aa13.29□□□□□ -0.28
ZNF397-206ENST00000589420 ARMT1Q9H993 441 aa13.29□□□□□ -0.28
ZNF397-206ENST00000589420 ATP8A2Q9NTI2 1148 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms