RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 TMTC2Q8N394 836 aa29■■■□□ 2.23
RFX1-205ENST00000589239 FOXD4L1Q9NU39 408 aa29■■■□□ 2.23
RFX1-205ENST00000589239 FZD1Q9UP38 647 aa29■■■□□ 2.23
RFX1-205ENST00000589239 IGKV6D-41A0A0C4DH26 115 aa28.99■■■□□ 2.23
RFX1-205ENST00000589239 APOA5Q6Q788 366 aa28.99■■■□□ 2.23
RFX1-205ENST00000589239 ZNF274Q96GC6 653 aaPredicted RBP28.99■■■□□ 2.23
RFX1-205ENST00000589239 MYL10Q9BUA6 226 aa28.99■■■□□ 2.23
RFX1-205ENST00000589239 SLC12A7Q9Y666 1083 aa28.99■■■□□ 2.23
RFX1-205ENST00000589239 GOLGA8BA8MQT2 603 aa28.99■■■□□ 2.23
RFX1-205ENST00000589239 GH2P01242 217 aa28.99■■■□□ 2.23
RFX1-205ENST00000589239 RXRAP19793 462 aa28.99■■■□□ 2.23
RFX1-205ENST00000589239 ST3GAL1Q11201 340 aa28.99■■■□□ 2.23
RFX1-205ENST00000589239 SSC5DA1L4H1 1573 aa28.98■■■□□ 2.23
RFX1-205ENST00000589239 PHF20L1A8MW92 1017 aa28.98■■■□□ 2.23
RFX1-205ENST00000589239 CCDC178Q5BJE1 867 aa28.98■■■□□ 2.23
RFX1-205ENST00000589239 CCDC83Q8IWF9 413 aa28.98■■■□□ 2.23
RFX1-205ENST00000589239 GLIS2Q9BZE0 524 aaPredicted RBP28.98■■■□□ 2.23
RFX1-205ENST00000589239 MTMR4Q9NYA4 1195 aa28.98■■■□□ 2.23
RFX1-205ENST00000589239 HSP90AA1P07900 732 aaKnown RBP28.97■■■□□ 2.23
RFX1-205ENST00000589239 CCT2P78371 535 aaKnown RBP28.97■■■□□ 2.23
RFX1-205ENST00000589239 SUPT20HL1Q3ZLR7 823 aa28.97■■■□□ 2.23
RFX1-205ENST00000589239 MICU3Q86XE3 530 aa28.97■■■□□ 2.23
RFX1-205ENST00000589239 SLKQ9H2G2 1235 aaPredicted RBP28.97■■■□□ 2.23
RFX1-205ENST00000589239 HPS5Q9UPZ3 1129 aa28.97■■■□□ 2.23
RFX1-205ENST00000589239 GUCY1A2P33402 732 aa28.97■■■□□ 2.23
RFX1-205ENST00000589239 SCRN1Q12765 414 aa28.97■■■□□ 2.23
RFX1-205ENST00000589239 CUL4AQ13619 759 aa28.97■■■□□ 2.23
RFX1-205ENST00000589239 DCAF15Q66K64 600 aa28.97■■■□□ 2.23
RFX1-205ENST00000589239 TMEM179Q6ZVK1 233 aa28.97■■■□□ 2.23
RFX1-205ENST00000589239 HOOK2Q96ED9 719 aa28.97■■■□□ 2.23
RFX1-205ENST00000589239 PFKFB2O60825 505 aa28.96■■■□□ 2.23
RFX1-205ENST00000589239 SEPT2Q15019 361 aa28.96■■■□□ 2.23
RFX1-205ENST00000589239 RAB3GAP1Q15042 981 aa28.96■■■□□ 2.23
RFX1-205ENST00000589239 MAP1SQ66K74 1059 aaPredicted RBP28.96■■■□□ 2.23
RFX1-205ENST00000589239 ZNF654Q8IZM8 581 aa28.96■■■□□ 2.23
RFX1-205ENST00000589239 ANKS1AQ92625 1134 aa28.96■■■□□ 2.23
RFX1-205ENST00000589239 GTF3C6Q969F1 213 aa28.96■■■□□ 2.23
RFX1-205ENST00000589239 TMEM47Q9BQJ4 181 aa28.96■■■□□ 2.23
RFX1-205ENST00000589239 CABP5Q9NP86 173 aa28.96■■■□□ 2.23
RFX1-205ENST00000589239 ZBTB43O43298 467 aa28.96■■■□□ 2.23
RFX1-205ENST00000589239 NOVP48745 357 aa28.96■■■□□ 2.23
RFX1-205ENST00000589239 CDC37L1Q7L3B6 337 aa28.96■■■□□ 2.23
RFX1-205ENST00000589239 NCOA5Q9HCD5 579 aaKnown RBP28.96■■■□□ 2.23
RFX1-205ENST00000589239 GREB1LQ9C091 1923 aaPredicted RBP28.95■■■□□ 2.23
RFX1-205ENST00000589239 CAP2P40123 477 aa28.95■■■□□ 2.22
RFX1-205ENST00000589239 CCDC144CPQ8IYA2 1237 aa28.95■■■□□ 2.22
RFX1-205ENST00000589239 KAT14Q9H8E8 782 aa28.95■■■□□ 2.22
RFX1-205ENST00000589239 DTNBO60941 627 aa28.94■■■□□ 2.22
RFX1-205ENST00000589239 PRKG1Q13976 671 aa28.94■■■□□ 2.22
RFX1-205ENST00000589239 SYNE3Q6ZMZ3 975 aa28.94■■■□□ 2.22
RFX1-205ENST00000589239 UBE2Q2Q8WVN8 375 aa28.94■■■□□ 2.22
RFX1-205ENST00000589239 ZNF341Q9BYN7 854 aa28.94■■■□□ 2.22
RFX1-205ENST00000589239 ZBTB21Q9ULJ3 1066 aa28.94■■■□□ 2.22
RFX1-205ENST00000589239 CATIPQ7Z7H3 387 aa28.94■■■□□ 2.22
RFX1-205ENST00000589239 NUP133Q8WUM0 1156 aa28.94■■■□□ 2.22
RFX1-205ENST00000589239 CDCA5Q96FF9 252 aa28.94■■■□□ 2.22
RFX1-205ENST00000589239 KANSL2Q9H9L4 492 aa28.94■■■□□ 2.22
RFX1-205ENST00000589239 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.94■■■□□ 2.22
RFX1-205ENST00000589239 TTLL1O95922 423 aa28.93■■■□□ 2.22
RFX1-205ENST00000589239 METAP2P50579 478 aaKnown RBP eCLIP28.93■■■□□ 2.22
RFX1-205ENST00000589239 ATP2B2Q01814 1243 aa28.93■■■□□ 2.22
RFX1-205ENST00000589239 CLIP2Q9UDT6 1046 aa28.93■■■□□ 2.22
RFX1-205ENST00000589239 PNMA1Q8ND90 353 aa28.93■■■□□ 2.22
RFX1-205ENST00000589239 INPP5BP32019 993 aa28.92■■■□□ 2.22
RFX1-205ENST00000589239 ICA1Q05084 483 aa28.92■■■□□ 2.22
RFX1-205ENST00000589239 TROAPQ12815 778 aa28.92■■■□□ 2.22
RFX1-205ENST00000589239 WRNIP1Q96S55 665 aa28.92■■■□□ 2.22
RFX1-205ENST00000589239 TOP1P11387 765 aaKnown RBP28.91■■■□□ 2.22
RFX1-205ENST00000589239 LDHDQ86WU2 507 aa28.91■■■□□ 2.22
RFX1-205ENST00000589239 GOLGA8AA7E2F4 631 aa28.91■■■□□ 2.22
RFX1-205ENST00000589239 EEF2P13639 858 aaKnown RBP28.91■■■□□ 2.22
RFX1-205ENST00000589239 SIAH1Q8IUQ4 282 aa28.91■■■□□ 2.22
RFX1-205ENST00000589239 LRRC47Q8N1G4 583 aaKnown RBP28.91■■■□□ 2.22
RFX1-205ENST00000589239 ZNF112Q9UJU3 913 aa28.91■■■□□ 2.22
RFX1-205ENST00000589239 CHMP4CQ96CF2 233 aa28.9■■■□□ 2.22
RFX1-205ENST00000589239 KLRG1Q96E93 195 aa28.9■■■□□ 2.22
RFX1-205ENST00000589239 MTMR7Q9Y216 660 aa28.9■■■□□ 2.22
RFX1-205ENST00000589239 CTNND1O60716 968 aaKnown RBP28.9■■■□□ 2.22
RFX1-205ENST00000589239 CDC27P30260 824 aa28.9■■■□□ 2.22
RFX1-205ENST00000589239 INTS4Q96HW7 963 aaKnown RBP28.9■■■□□ 2.22
RFX1-205ENST00000589239 USP2O75604 605 aaPredicted RBP28.89■■■□□ 2.22
RFX1-205ENST00000589239 DDAH1O94760 285 aa28.89■■■□□ 2.22
RFX1-205ENST00000589239 ASNSP08243 561 aa28.89■■■□□ 2.22
RFX1-205ENST00000589239 ADD1P35611 737 aaKnown RBP28.89■■■□□ 2.22
RFX1-205ENST00000589239 ZKSCAN4Q969J2 545 aaPredicted RBP28.89■■■□□ 2.22
RFX1-205ENST00000589239 TRAF5O00463 557 aa28.88■■■□□ 2.21
RFX1-205ENST00000589239 CCDC84Q86UT8 332 aaPredicted RBP28.88■■■□□ 2.21
RFX1-205ENST00000589239 FANCBQ8NB91 859 aa28.88■■■□□ 2.21
RFX1-205ENST00000589239 FAM217BQ9NTX9 383 aaPredicted RBP28.88■■■□□ 2.21
RFX1-205ENST00000589239 NYAP2Q9P242 653 aa28.88■■■□□ 2.21
RFX1-205ENST00000589239 RCAN1P53805 252 aa28.88■■■□□ 2.21
RFX1-205ENST00000589239 PPP4R3BQ5MIZ7 849 aa28.88■■■□□ 2.21
RFX1-205ENST00000589239 RASGRP2Q7LDG7 609 aa28.88■■■□□ 2.21
RFX1-205ENST00000589239 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.88■■■□□ 2.21
RFX1-205ENST00000589239 PPFIA3O75145 1194 aa28.87■■■□□ 2.21
RFX1-205ENST00000589239 FMR1Q06787 632 aaKnown RBP eCLIP28.87■■■□□ 2.21
RFX1-205ENST00000589239 RTN1Q16799 776 aa28.87■■■□□ 2.21
RFX1-205ENST00000589239 PPP1R12BO60237 982 aaPredicted RBP28.87■■■□□ 2.21
RFX1-205ENST00000589239 NF2P35240 595 aa28.87■■■□□ 2.21
RFX1-205ENST00000589239 NID2Q14112 1375 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms