RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 VPS53Q5VIR6 699 aa11.84□□□□□ -0.51
PTPN2-208ENST00000589216 EVI5LQ96CN4 794 aa11.84□□□□□ -0.51
PTPN2-208ENST00000589216 TRIM47Q96LD4 638 aa11.84□□□□□ -0.51
PTPN2-208ENST00000589216 FEZ1Q99689 392 aa11.84□□□□□ -0.51
PTPN2-208ENST00000589216 TBC1D2Q9BYX2 928 aa11.84□□□□□ -0.51
PTPN2-208ENST00000589216 ASCC2Q9H1I8 757 aaPredicted RBP11.84□□□□□ -0.51
PTPN2-208ENST00000589216 EMILIN3Q9NT22 766 aa11.84□□□□□ -0.51
PTPN2-208ENST00000589216 GINM1Q9NU53 330 aa11.84□□□□□ -0.51
PTPN2-208ENST00000589216 SLC45A1Q9Y2W3 748 aa11.84□□□□□ -0.51
PTPN2-208ENST00000589216 USP17L10C9JJH3 530 aa11.83□□□□□ -0.52
PTPN2-208ENST00000589216 MPHOSPH10O00566 681 aaKnown RBP11.83□□□□□ -0.52
PTPN2-208ENST00000589216 TDO2P48775 406 aa11.83□□□□□ -0.52
PTPN2-208ENST00000589216 NMIQ13287 307 aaPredicted RBP11.83□□□□□ -0.52
PTPN2-208ENST00000589216 SBK1Q52WX2 424 aa11.83□□□□□ -0.52
PTPN2-208ENST00000589216 KIAA1755Q5JYT7 1200 aa11.83□□□□□ -0.52
PTPN2-208ENST00000589216 POTEEQ6S8J3 1075 aa11.83□□□□□ -0.52
PTPN2-208ENST00000589216 ZNF589Q86UQ0 364 aaPredicted RBP11.83□□□□□ -0.52
PTPN2-208ENST00000589216 OSBPL3Q9H4L5 887 aa11.83□□□□□ -0.52
PTPN2-208ENST00000589216 EFCC1Q9HA90 598 aa11.83□□□□□ -0.52
PTPN2-208ENST00000589216 SWAP70Q9UH65 585 aa11.83□□□□□ -0.52
PTPN2-208ENST00000589216 PTCH2Q9Y6C5 1203 aa11.83□□□□□ -0.52
PTPN2-208ENST00000589216 COL11A1P12107 1806 aaPredicted RBP11.83□□□□□ -0.52
PTPN2-208ENST00000589216 KIAA0100Q14667 2235 aaKnown RBP11.82□□□□□ -0.52
PTPN2-208ENST00000589216 TRIM6-TRIM34B2RNG4 842 aa11.82□□□□□ -0.52
PTPN2-208ENST00000589216 TNRC18O15417 2968 aaPredicted RBP11.82□□□□□ -0.52
PTPN2-208ENST00000589216 GSPT1P15170 499 aaKnown RBP11.82□□□□□ -0.52
PTPN2-208ENST00000589216 VCAM1P19320 739 aa11.82□□□□□ -0.52
PTPN2-208ENST00000589216 RASA1P20936 1047 aa11.82□□□□□ -0.52
PTPN2-208ENST00000589216 SOX10P56693 466 aa11.82□□□□□ -0.52
PTPN2-208ENST00000589216 GIMAP6Q6P9H5 292 aa11.82□□□□□ -0.52
PTPN2-208ENST00000589216 SIAH1Q8IUQ4 282 aa11.82□□□□□ -0.52
PTPN2-208ENST00000589216 IFNL3Q8IZI9 196 aa11.82□□□□□ -0.52
PTPN2-208ENST00000589216 ANKRD13CQ8N6S4 541 aa11.82□□□□□ -0.52
PTPN2-208ENST00000589216 SMCR8Q8TEV9 937 aaPredicted RBP11.82□□□□□ -0.52
PTPN2-208ENST00000589216 RILPL2Q969X0 211 aa11.82□□□□□ -0.52
PTPN2-208ENST00000589216 DDRGK1Q96HY6 314 aa11.82□□□□□ -0.52
PTPN2-208ENST00000589216 C12orf42Q96LP6 360 aa11.82□□□□□ -0.52
PTPN2-208ENST00000589216 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.82□□□□□ -0.52
PTPN2-208ENST00000589216 KIAA1683Q9H0B3 1180 aa11.82□□□□□ -0.52
PTPN2-208ENST00000589216 TMOD4Q9NZQ9 345 aa11.82□□□□□ -0.52
PTPN2-208ENST00000589216 PTPN22Q9Y2R2 807 aa11.82□□□□□ -0.52
PTPN2-208ENST00000589216 MINDY4BA8MYZ0 360 aa11.81□□□□□ -0.52
PTPN2-208ENST00000589216 PRDM1O75626 825 aa11.81□□□□□ -0.52
PTPN2-208ENST00000589216 APPP05067 770 aa11.81□□□□□ -0.52
PTPN2-208ENST00000589216 GNAT2P19087 354 aa11.81□□□□□ -0.52
PTPN2-208ENST00000589216 PSMC4P43686 418 aa11.81□□□□□ -0.52
PTPN2-208ENST00000589216 PKN2Q16513 984 aaKnown RBP11.81□□□□□ -0.52
PTPN2-208ENST00000589216 LRRFIP1Q32MZ4 808 aaKnown RBP11.81□□□□□ -0.52
PTPN2-208ENST00000589216 TMEM179Q6ZVK1 233 aa11.81□□□□□ -0.52
PTPN2-208ENST00000589216 SKAP1Q86WV1 359 aa11.81□□□□□ -0.52
PTPN2-208ENST00000589216 IL25Q9H293 177 aa11.81□□□□□ -0.52
PTPN2-208ENST00000589216 TXNRD2Q9NNW7 524 aa11.81□□□□□ -0.52
PTPN2-208ENST00000589216 CABP5Q9NP86 173 aa11.81□□□□□ -0.52
PTPN2-208ENST00000589216 PNMA3Q9UL41 463 aa11.81□□□□□ -0.52
PTPN2-208ENST00000589216 TACC3Q9Y6A5 838 aa11.81□□□□□ -0.52
PTPN2-208ENST00000589216 BRCA2P51587 3418 aa11.81□□□□□ -0.52
PTPN2-208ENST00000589216 C19orf81C9J6K1 198 aa11.8□□□□□ -0.52
PTPN2-208ENST00000589216 PATL2C9JE40 543 aaKnown RBP11.8□□□□□ -0.52
PTPN2-208ENST00000589216 OSBPP22059 807 aa11.8□□□□□ -0.52
PTPN2-208ENST00000589216 IRX3P78415 501 aaPredicted RBP11.8□□□□□ -0.52
PTPN2-208ENST00000589216 ICA1Q05084 483 aa11.8□□□□□ -0.52
PTPN2-208ENST00000589216 FAM110CQ1W6H9 321 aa11.8□□□□□ -0.52
PTPN2-208ENST00000589216 USP17L2Q6R6M4 530 aa11.8□□□□□ -0.52
PTPN2-208ENST00000589216 AMOTL1Q8IY63 956 aa11.8□□□□□ -0.52
PTPN2-208ENST00000589216 P2RX7Q99572 595 aaKnown RBP11.8□□□□□ -0.52
PTPN2-208ENST00000589216 NAPBQ9H115 298 aa11.8□□□□□ -0.52
PTPN2-208ENST00000589216 HOXA7P31268 230 aaPredicted RBP11.79□□□□□ -0.52
PTPN2-208ENST00000589216 HERVK_113P62684 666 aa11.79□□□□□ -0.52
PTPN2-208ENST00000589216 PRKCZQ05513 592 aa11.79□□□□□ -0.52
PTPN2-208ENST00000589216 PPARAQ07869 468 aa11.79□□□□□ -0.52
PTPN2-208ENST00000589216 TTC22Q5TAA0 569 aa11.79□□□□□ -0.52
PTPN2-208ENST00000589216 RPAP3Q9H6T3 665 aaPredicted RBP11.79□□□□□ -0.52
PTPN2-208ENST00000589216 HELLSQ9NRZ9 838 aa11.79□□□□□ -0.52
PTPN2-208ENST00000589216 SRRDQ9UH36 339 aa11.79□□□□□ -0.52
PTPN2-208ENST00000589216 TAOK2Q9UL54 1235 aa11.79□□□□□ -0.52
PTPN2-208ENST00000589216 GABRQQ9UN88 632 aa11.79□□□□□ -0.52
PTPN2-208ENST00000589216 CCDC171Q6TFL3 1326 aa11.79□□□□□ -0.52
PTPN2-208ENST00000589216 PLIN4Q96Q06 1357 aa11.79□□□□□ -0.52
PTPN2-208ENST00000589216 IGKV6D-41A0A0C4DH26 115 aa11.78□□□□□ -0.52
PTPN2-208ENST00000589216 CNMDO75829 334 aa11.78□□□□□ -0.52
PTPN2-208ENST00000589216 FMNL1O95466 1100 aaPredicted RBP11.78□□□□□ -0.52
PTPN2-208ENST00000589216 EEF2P13639 858 aaKnown RBP11.78□□□□□ -0.52
PTPN2-208ENST00000589216 SDSP20132 328 aa11.78□□□□□ -0.52
PTPN2-208ENST00000589216 CTDSPL2Q05D32 466 aa11.78□□□□□ -0.52
PTPN2-208ENST00000589216 PABPC4Q13310 644 aaKnown RBP eCLIP11.78□□□□□ -0.52
PTPN2-208ENST00000589216 KIF22Q14807 665 aa11.78□□□□□ -0.52
PTPN2-208ENST00000589216 SPICE1Q8N0Z3 855 aa11.78□□□□□ -0.52
PTPN2-208ENST00000589216 SH3TC2Q8TF17 1288 aa11.78□□□□□ -0.52
PTPN2-208ENST00000589216 CCDC17Q96LX7 622 aa11.78□□□□□ -0.52
PTPN2-208ENST00000589216 NBPF3Q9H094 633 aa11.78□□□□□ -0.52
PTPN2-208ENST00000589216 INCENPQ9NQS7 918 aa11.78□□□□□ -0.52
PTPN2-208ENST00000589216 MORF4L1Q9UBU8 362 aa11.78□□□□□ -0.52
PTPN2-208ENST00000589216 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.78□□□□□ -0.52
PTPN2-208ENST00000589216 MYPNQ86TC9 1320 aa11.78□□□□□ -0.52
PTPN2-208ENST00000589216 ZNF236Q9UL36 1845 aa11.77□□□□□ -0.52
PTPN2-208ENST00000589216 SPDYE16A6NNV3 312 aaPredicted RBP11.77□□□□□ -0.53
PTPN2-208ENST00000589216 HSPD1P10809 573 aaKnown RBP11.77□□□□□ -0.53
PTPN2-208ENST00000589216 GCLCP48506 637 aaPredicted RBP11.77□□□□□ -0.53
PTPN2-208ENST00000589216 USP14P54578 494 aa11.77□□□□□ -0.53
PTPN2-208ENST00000589216 FCGRTP55899 365 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms