RNA–Protein interactions for RNA: ENST00000589091.1

DNMT1-217, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-217ENST00000589091 MKI67P46013 3256 aaKnown RBP17.66■□□□□ 0.42
DNMT1-217ENST00000589091 MAPK4P31152 587 aa17.66■□□□□ 0.42
DNMT1-217ENST00000589091 UBE3CQ15386 1083 aa17.66■□□□□ 0.42
DNMT1-217ENST00000589091 AMOTL1Q8IY63 956 aa17.66■□□□□ 0.42
DNMT1-217ENST00000589091 U2AF1L4Q8WU68 220 aaKnown RBP17.66■□□□□ 0.42
DNMT1-217ENST00000589091 SDR42E1Q8WUS8 393 aa17.66■□□□□ 0.42
DNMT1-217ENST00000589091 UNC93B1Q9H1C4 597 aa17.66■□□□□ 0.42
DNMT1-217ENST00000589091 GREB1LQ9C091 1923 aaPredicted RBP17.66■□□□□ 0.42
DNMT1-217ENST00000589091 USP17L15C9J2P7 530 aa17.65■□□□□ 0.42
DNMT1-217ENST00000589091 USP17L13C9JLJ4 530 aa17.65■□□□□ 0.42
DNMT1-217ENST00000589091 USP17L11C9JVI0 530 aa17.65■□□□□ 0.42
DNMT1-217ENST00000589091 USP17L18D6R9N7 530 aa17.65■□□□□ 0.42
DNMT1-217ENST00000589091 USP17L22D6RA61 530 aa17.65■□□□□ 0.42
DNMT1-217ENST00000589091 USP17L17D6RBQ6 530 aa17.65■□□□□ 0.42
DNMT1-217ENST00000589091 USP17L19D6RCP7 530 aa17.65■□□□□ 0.42
DNMT1-217ENST00000589091 USP17L20D6RJB6 530 aa17.65■□□□□ 0.42
DNMT1-217ENST00000589091 SGPL1O95470 568 aa17.65■□□□□ 0.42
DNMT1-217ENST00000589091 HMGCRP04035 888 aa17.65■□□□□ 0.42
DNMT1-217ENST00000589091 ERVK-9P63128 1117 aa17.65■□□□□ 0.42
DNMT1-217ENST00000589091 ERVK-24P63145 666 aa17.65■□□□□ 0.42
DNMT1-217ENST00000589091 USP17L24Q0WX57 530 aa17.65■□□□□ 0.42
DNMT1-217ENST00000589091 SOCS4Q8WXH5 440 aa17.65■□□□□ 0.42
DNMT1-217ENST00000589091 DDRGK1Q96HY6 314 aa17.65■□□□□ 0.42
DNMT1-217ENST00000589091 GPATCH3Q96I76 525 aa17.65■□□□□ 0.42
DNMT1-217ENST00000589091 ARMT1Q9H993 441 aa17.65■□□□□ 0.42
DNMT1-217ENST00000589091 MBD4O95243 580 aa17.64■□□□□ 0.41
DNMT1-217ENST00000589091 ZYXQ15942 572 aaKnown RBP17.64■□□□□ 0.41
DNMT1-217ENST00000589091 CCAR1Q8IX12 1150 aaKnown RBP17.64■□□□□ 0.41
DNMT1-217ENST00000589091 NUDT12Q9BQG2 462 aa17.64■□□□□ 0.41
DNMT1-217ENST00000589091 HTATIP2Q9BUP3 242 aa17.64■□□□□ 0.41
DNMT1-217ENST00000589091 DCTPP1Q9H773 170 aa17.64■□□□□ 0.41
DNMT1-217ENST00000589091 PAK6Q9NQU5 681 aaPredicted RBP17.64■□□□□ 0.41
DNMT1-217ENST00000589091 GJD2Q9UKL4 321 aa17.64■□□□□ 0.41
DNMT1-217ENST00000589091 ZNF236Q9UL36 1845 aa17.63■□□□□ 0.41
DNMT1-217ENST00000589091 SMARCA5O60264 1052 aaPredicted RBP17.63■□□□□ 0.41
DNMT1-217ENST00000589091 CATSPERGQ6ZRH7 1159 aa17.63■□□□□ 0.41
DNMT1-217ENST00000589091 TRMT44Q8IYL2 757 aaKnown RBP17.63■□□□□ 0.41
DNMT1-217ENST00000589091 PAGR1Q9BTK6 254 aa17.63■□□□□ 0.41
DNMT1-217ENST00000589091 TXNRD2Q9NNW7 524 aa17.63■□□□□ 0.41
DNMT1-217ENST00000589091 ECHDC1Q9NTX5 307 aa17.63■□□□□ 0.41
DNMT1-217ENST00000589091 RBPJLQ9UBG7 517 aa17.63■□□□□ 0.41
DNMT1-217ENST00000589091 RABGAP1Q9Y3P9 1069 aa17.63■□□□□ 0.41
DNMT1-217ENST00000589091 PLXNA1Q9UIW2 1896 aa17.63■□□□□ 0.41
DNMT1-217ENST00000589091 MPHOSPH10O00566 681 aaKnown RBP17.62■□□□□ 0.41
DNMT1-217ENST00000589091 FARP2O94887 1054 aaPredicted RBP17.62■□□□□ 0.41
DNMT1-217ENST00000589091 VCAM1P19320 739 aa17.62■□□□□ 0.41
DNMT1-217ENST00000589091 GUCY1A2P33402 732 aa17.62■□□□□ 0.41
DNMT1-217ENST00000589091 CCNA1P78396 465 aa17.62■□□□□ 0.41
DNMT1-217ENST00000589091 SEPT2Q15019 361 aa17.62■□□□□ 0.41
DNMT1-217ENST00000589091 LBX2Q6XYB7 198 aa17.62■□□□□ 0.41
DNMT1-217ENST00000589091 TMEM179Q6ZVK1 233 aa17.62■□□□□ 0.41
DNMT1-217ENST00000589091 UBE2Q1Q7Z7E8 422 aa17.62■□□□□ 0.41
DNMT1-217ENST00000589091 XRCC5P13010 732 aaKnown RBP17.61■□□□□ 0.41
DNMT1-217ENST00000589091 ACER1Q8TDN7 264 aa17.61■□□□□ 0.41
DNMT1-217ENST00000589091 CCDC17Q96LX7 622 aa17.61■□□□□ 0.41
DNMT1-217ENST00000589091 DEFB118Q96PH6 123 aa17.61■□□□□ 0.41
DNMT1-217ENST00000589091 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.61■□□□□ 0.41
DNMT1-217ENST00000589091 CWC22Q9HCG8 908 aaKnown RBP17.61■□□□□ 0.41
DNMT1-217ENST00000589091 HMX1Q9NP08 348 aaPredicted RBP17.61■□□□□ 0.41
DNMT1-217ENST00000589091 RPTORQ8N122 1335 aa17.61■□□□□ 0.41
DNMT1-217ENST00000589091 PRKAB2O43741 272 aa17.6■□□□□ 0.41
DNMT1-217ENST00000589091 GLRX3O76003 335 aaKnown RBP17.6■□□□□ 0.41
DNMT1-217ENST00000589091 TFRCP02786 760 aaKnown RBP17.6■□□□□ 0.41
DNMT1-217ENST00000589091 C12orf60Q5U649 245 aa17.6■□□□□ 0.41
DNMT1-217ENST00000589091 GPR142Q7Z601 462 aa17.6■□□□□ 0.41
DNMT1-217ENST00000589091 DPF3Q92784 378 aa17.6■□□□□ 0.41
DNMT1-217ENST00000589091 SH2D4AQ9H788 454 aa17.6■□□□□ 0.41
DNMT1-217ENST00000589091 ARHGEF10LQ9HCE6 1279 aa17.6■□□□□ 0.41
DNMT1-217ENST00000589091 SLC4A4Q9Y6R1 1079 aa17.6■□□□□ 0.41
DNMT1-217ENST00000589091 CYP2D6P10635 497 aa17.59■□□□□ 0.41
DNMT1-217ENST00000589091 CYP2B6P20813 491 aa17.59■□□□□ 0.41
DNMT1-217ENST00000589091 RGS2P41220 211 aa17.59■□□□□ 0.41
DNMT1-217ENST00000589091 Q3C1V9 767 aa17.59■□□□□ 0.41
DNMT1-217ENST00000589091 SLFNL1Q499Z3 407 aa17.59■□□□□ 0.41
DNMT1-217ENST00000589091 PLEKHH3Q7Z736 793 aa17.59■□□□□ 0.41
DNMT1-217ENST00000589091 KBTBD3Q8NAB2 608 aa17.59■□□□□ 0.41
DNMT1-217ENST00000589091 ANKLE1Q8NAG6 615 aa17.59■□□□□ 0.41
DNMT1-217ENST00000589091 CRISPLD2Q9H0B8 497 aa17.59■□□□□ 0.41
DNMT1-217ENST00000589091 PORCNQ9H237 461 aa17.59■□□□□ 0.41
DNMT1-217ENST00000589091 RPAP3Q9H6T3 665 aaPredicted RBP17.59■□□□□ 0.41
DNMT1-217ENST00000589091 ARPP21Q9UBL0 812 aaPredicted RBP17.59■□□□□ 0.41
DNMT1-217ENST00000589091 CEP290O15078 2479 aa17.58■□□□□ 0.41
DNMT1-217ENST00000589091 USP17L12C9JPN9 530 aa17.58■□□□□ 0.4
DNMT1-217ENST00000589091 USP17L21D6R901 530 aa17.58■□□□□ 0.4
DNMT1-217ENST00000589091 PEX10O60683 326 aa17.58■□□□□ 0.4
DNMT1-217ENST00000589091 ZFYP08048 801 aaPredicted RBP17.58■□□□□ 0.4
DNMT1-217ENST00000589091 EVX2Q03828 476 aa17.58■□□□□ 0.4
DNMT1-217ENST00000589091 LRRFIP1Q32MZ4 808 aaKnown RBP17.58■□□□□ 0.4
DNMT1-217ENST00000589091 HABP4Q5JVS0 413 aaKnown RBP17.58■□□□□ 0.4
DNMT1-217ENST00000589091 MORN1Q5T089 497 aa17.58■□□□□ 0.4
DNMT1-217ENST00000589091 C16orf86Q6ZW13 317 aa17.58■□□□□ 0.4
DNMT1-217ENST00000589091 SLC44A5Q8NCS7 719 aa17.58■□□□□ 0.4
DNMT1-217ENST00000589091 TRIB2Q92519 343 aa17.58■□□□□ 0.4
DNMT1-217ENST00000589091 LPAR1Q92633 364 aa17.58■□□□□ 0.4
DNMT1-217ENST00000589091 DYNLL2Q96FJ2 89 aa17.58■□□□□ 0.4
DNMT1-217ENST00000589091 APBA2Q99767 749 aa17.58■□□□□ 0.4
DNMT1-217ENST00000589091 PUS7LQ9H0K6 701 aaKnown RBP17.58■□□□□ 0.4
DNMT1-217ENST00000589091 TTC41PQ6P2S7 1318 aa17.57■□□□□ 0.4
DNMT1-217ENST00000589091 SPDYE16A6NNV3 312 aaPredicted RBP17.57■□□□□ 0.4
DNMT1-217ENST00000589091 CNMDO75829 334 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms