RNA–Protein interactions for RNA: ENST00000588905.5

GCDH-208, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-208ENST00000588905 USP17L2Q6R6M4 530 aa18.54■□□□□ 0.56
GCDH-208ENST00000588905 TRIM6-TRIM34B2RNG4 842 aa18.53■□□□□ 0.56
GCDH-208ENST00000588905 FMNL1O95466 1100 aaPredicted RBP18.53■□□□□ 0.56
GCDH-208ENST00000588905 GNAT2P19087 354 aa18.53■□□□□ 0.56
GCDH-208ENST00000588905 HOXD10P28358 340 aa18.53■□□□□ 0.56
GCDH-208ENST00000588905 HOXA7P31268 230 aaPredicted RBP18.53■□□□□ 0.56
GCDH-208ENST00000588905 PRMT2P55345 433 aa18.53■□□□□ 0.56
GCDH-208ENST00000588905 SLC44A5Q8NCS7 719 aa18.53■□□□□ 0.56
GCDH-208ENST00000588905 TRIM47Q96LD4 638 aa18.53■□□□□ 0.56
GCDH-208ENST00000588905 ASCC2Q9H1I8 757 aaPredicted RBP18.53■□□□□ 0.56
GCDH-208ENST00000588905 ARPP21Q9UBL0 812 aaPredicted RBP18.53■□□□□ 0.56
GCDH-208ENST00000588905 CEP290O15078 2479 aa18.52■□□□□ 0.56
GCDH-208ENST00000588905 PATL2C9JE40 543 aaKnown RBP18.52■□□□□ 0.56
GCDH-208ENST00000588905 MPHOSPH10O00566 681 aaKnown RBP18.52■□□□□ 0.56
GCDH-208ENST00000588905 GUCY1A2P33402 732 aa18.52■□□□□ 0.56
GCDH-208ENST00000588905 GCLCP48506 637 aaPredicted RBP18.52■□□□□ 0.56
GCDH-208ENST00000588905 CDK8P49336 464 aa18.52■□□□□ 0.56
GCDH-208ENST00000588905 USP14P54578 494 aa18.52■□□□□ 0.56
GCDH-208ENST00000588905 SBK1Q52WX2 424 aa18.52■□□□□ 0.56
GCDH-208ENST00000588905 C16orf86Q6ZW13 317 aa18.52■□□□□ 0.56
GCDH-208ENST00000588905 TICAM2Q86XR7 235 aa18.52■□□□□ 0.56
GCDH-208ENST00000588905 RILPL2Q969X0 211 aa18.52■□□□□ 0.56
GCDH-208ENST00000588905 CCDC17Q96LX7 622 aa18.52■□□□□ 0.56
GCDH-208ENST00000588905 FEZ1Q99689 392 aa18.52■□□□□ 0.56
GCDH-208ENST00000588905 EMILIN3Q9NT22 766 aa18.52■□□□□ 0.56
GCDH-208ENST00000588905 DDX60LQ5H9U9 1706 aaKnown RBP18.52■□□□□ 0.55
GCDH-208ENST00000588905 ECM2O94769 699 aaPredicted RBP18.51■□□□□ 0.55
GCDH-208ENST00000588905 FCGRTP55899 365 aa18.51■□□□□ 0.55
GCDH-208ENST00000588905 IRX3P78415 501 aaPredicted RBP18.51■□□□□ 0.55
GCDH-208ENST00000588905 SEPT2Q15019 361 aa18.51■□□□□ 0.55
GCDH-208ENST00000588905 TMEM179Q6ZVK1 233 aa18.51■□□□□ 0.55
GCDH-208ENST00000588905 ACER1Q8TDN7 264 aa18.51■□□□□ 0.55
GCDH-208ENST00000588905 C12orf42Q96LP6 360 aa18.51■□□□□ 0.55
GCDH-208ENST00000588905 KIAA1683Q9H0B3 1180 aa18.51■□□□□ 0.55
GCDH-208ENST00000588905 SRRDQ9UH36 339 aa18.51■□□□□ 0.55
GCDH-208ENST00000588905 NAV1Q8NEY1 1877 aa18.51■□□□□ 0.55
GCDH-208ENST00000588905 APPP05067 770 aa18.5■□□□□ 0.55
GCDH-208ENST00000588905 FAM110CQ1W6H9 321 aa18.5■□□□□ 0.55
GCDH-208ENST00000588905 CCDC129Q6ZRS4 1044 aa18.5■□□□□ 0.55
GCDH-208ENST00000588905 ANKRD13CQ8N6S4 541 aa18.5■□□□□ 0.55
GCDH-208ENST00000588905 FAM227BQ96M60 508 aa18.5■□□□□ 0.55
GCDH-208ENST00000588905 P2RX7Q99572 595 aaKnown RBP18.5■□□□□ 0.55
GCDH-208ENST00000588905 EPB41L4AQ9HCS5 686 aaPredicted RBP18.5■□□□□ 0.55
GCDH-208ENST00000588905 MYH7P12883 1935 aa18.5■□□□□ 0.55
GCDH-208ENST00000588905 AKR1B1P15121 316 aa18.49■□□□□ 0.55
GCDH-208ENST00000588905 ZYXQ15942 572 aaKnown RBP18.49■□□□□ 0.55
GCDH-208ENST00000588905 NBPF11Q86T75 865 aa18.49■□□□□ 0.55
GCDH-208ENST00000588905 IFNL3Q8IZI9 196 aa18.49■□□□□ 0.55
GCDH-208ENST00000588905 SH3TC2Q8TF17 1288 aa18.49■□□□□ 0.55
GCDH-208ENST00000588905 HELLSQ9NRZ9 838 aa18.49■□□□□ 0.55
GCDH-208ENST00000588905 A0A0D9SFI3 127 aa18.48■□□□□ 0.55
GCDH-208ENST00000588905 MINDY4BA8MYZ0 360 aa18.48■□□□□ 0.55
GCDH-208ENST00000588905 FOXP2O15409 715 aa18.48■□□□□ 0.55
GCDH-208ENST00000588905 SDSP20132 328 aa18.48■□□□□ 0.55
GCDH-208ENST00000588905 TDO2P48775 406 aa18.48■□□□□ 0.55
GCDH-208ENST00000588905 SLC9C1Q4G0N8 1177 aa18.48■□□□□ 0.55
GCDH-208ENST00000588905 NACAP1Q9BZK3 213 aa18.48■□□□□ 0.55
GCDH-208ENST00000588905 USP17L15C9J2P7 530 aa18.47■□□□□ 0.55
GCDH-208ENST00000588905 USP17L13C9JLJ4 530 aa18.47■□□□□ 0.55
GCDH-208ENST00000588905 USP17L11C9JVI0 530 aa18.47■□□□□ 0.55
GCDH-208ENST00000588905 USP17L18D6R9N7 530 aa18.47■□□□□ 0.55
GCDH-208ENST00000588905 USP17L22D6RA61 530 aa18.47■□□□□ 0.55
GCDH-208ENST00000588905 USP17L17D6RBQ6 530 aa18.47■□□□□ 0.55
GCDH-208ENST00000588905 USP17L19D6RCP7 530 aa18.47■□□□□ 0.55
GCDH-208ENST00000588905 USP17L20D6RJB6 530 aa18.47■□□□□ 0.55
GCDH-208ENST00000588905 HERVK_113P62684 666 aa18.47■□□□□ 0.55
GCDH-208ENST00000588905 USP17L24Q0WX57 530 aa18.47■□□□□ 0.55
GCDH-208ENST00000588905 NMIQ13287 307 aaPredicted RBP18.47■□□□□ 0.55
GCDH-208ENST00000588905 MCMDC2Q4G0Z9 681 aa18.47■□□□□ 0.55
GCDH-208ENST00000588905 MORF4L1Q9UBU8 362 aa18.47■□□□□ 0.55
GCDH-208ENST00000588905 MYPNQ86TC9 1320 aa18.47■□□□□ 0.55
GCDH-208ENST00000588905 PLXNB2O15031 1838 aa18.46■□□□□ 0.55
GCDH-208ENST00000588905 A0A1W2PRG0 241 aa18.46■□□□□ 0.55
GCDH-208ENST00000588905 MYCP01106 439 aaPredicted RBP18.46■□□□□ 0.55
GCDH-208ENST00000588905 GSPT1P15170 499 aaKnown RBP18.46■□□□□ 0.55
GCDH-208ENST00000588905 VCAM1P19320 739 aa18.46■□□□□ 0.55
GCDH-208ENST00000588905 TTC22Q5TAA0 569 aa18.46■□□□□ 0.55
GCDH-208ENST00000588905 VPS53Q5VIR6 699 aa18.46■□□□□ 0.55
GCDH-208ENST00000588905 RAET1EQ8TD07 263 aa18.46■□□□□ 0.55
GCDH-208ENST00000588905 GTF3C2Q8WUA4 911 aaPredicted RBP18.46■□□□□ 0.55
GCDH-208ENST00000588905 MKNK2Q9HBH9 465 aa18.46■□□□□ 0.55
GCDH-208ENST00000588905 BAZ2AQ9UIF9 1905 aaKnown RBP18.45■□□□□ 0.54
GCDH-208ENST00000588905 TNPO2O14787 897 aaKnown RBP18.45■□□□□ 0.54
GCDH-208ENST00000588905 ICA1Q05084 483 aa18.45■□□□□ 0.54
GCDH-208ENST00000588905 PRKCZQ05513 592 aa18.45■□□□□ 0.54
GCDH-208ENST00000588905 CATSPERGQ6ZRH7 1159 aa18.45■□□□□ 0.54
GCDH-208ENST00000588905 CENPQQ7L2Z9 268 aaPredicted RBP18.45■□□□□ 0.54
GCDH-208ENST00000588905 SIAH1Q8IUQ4 282 aa18.45■□□□□ 0.54
GCDH-208ENST00000588905 COA7Q96BR5 231 aa18.45■□□□□ 0.54
GCDH-208ENST00000588905 SHISA4Q96DD7 197 aa18.45■□□□□ 0.54
GCDH-208ENST00000588905 KANSL2Q9H9L4 492 aa18.45■□□□□ 0.54
GCDH-208ENST00000588905 ZNF287Q9HBT7 754 aa18.45■□□□□ 0.54
GCDH-208ENST00000588905 ARHGEF10LQ9HCE6 1279 aa18.45■□□□□ 0.54
GCDH-208ENST00000588905 ALPK3Q96L96 1907 aa18.45■□□□□ 0.54
GCDH-208ENST00000588905 ROBO3Q96MS0 1386 aa18.44■□□□□ 0.54
GCDH-208ENST00000588905 MTFR1Q15390 333 aa18.44■□□□□ 0.54
GCDH-208ENST00000588905 ZNF589Q86UQ0 364 aaPredicted RBP18.44■□□□□ 0.54
GCDH-208ENST00000588905 STK11IPQ8N1F8 1099 aa18.44■□□□□ 0.54
GCDH-208ENST00000588905 GPRC5AQ8NFJ5 357 aa18.44■□□□□ 0.54
GCDH-208ENST00000588905 NAPBQ9H115 298 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms