RNA–Protein interactions for RNA: ENST00000588809.1

CCDC130-209, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-209ENST00000588809 MTFR1Q15390 333 aa23.11■■□□□ 1.29
CCDC130-209ENST00000588809 SLC44A5Q8NCS7 719 aa23.11■■□□□ 1.29
CCDC130-209ENST00000588809 PI4K2BQ8TCG2 481 aa23.11■■□□□ 1.29
CCDC130-209ENST00000588809 ACER1Q8TDN7 264 aa23.11■■□□□ 1.29
CCDC130-209ENST00000588809 SALL3Q9BXA9 1300 aa23.1■■□□□ 1.29
CCDC130-209ENST00000588809 ADCY3O60266 1144 aa23.1■■□□□ 1.29
CCDC130-209ENST00000588809 ZFYP08048 801 aaPredicted RBP23.1■■□□□ 1.29
CCDC130-209ENST00000588809 HDAC1Q13547 482 aaPredicted RBP23.1■■□□□ 1.29
CCDC130-209ENST00000588809 AAMPQ13685 434 aa23.1■■□□□ 1.29
CCDC130-209ENST00000588809 APPBP2Q92624 585 aa23.1■■□□□ 1.29
CCDC130-209ENST00000588809 DDRGK1Q96HY6 314 aa23.1■■□□□ 1.29
CCDC130-209ENST00000588809 STRBPQ96SI9 672 aaKnown RBP23.1■■□□□ 1.29
CCDC130-209ENST00000588809 TXNRD2Q9NNW7 524 aa23.1■■□□□ 1.29
CCDC130-209ENST00000588809 SLC4A4Q9Y6R1 1079 aa23.1■■□□□ 1.29
CCDC130-209ENST00000588809 MYH4Q9Y623 1939 aa23.1■■□□□ 1.29
CCDC130-209ENST00000588809 USP17L12C9JPN9 530 aa23.09■■□□□ 1.29
CCDC130-209ENST00000588809 USP17L21D6R901 530 aa23.09■■□□□ 1.29
CCDC130-209ENST00000588809 ERC2O15083 957 aa23.09■■□□□ 1.29
CCDC130-209ENST00000588809 MYCP01106 439 aaPredicted RBP23.09■■□□□ 1.29
CCDC130-209ENST00000588809 VCAM1P19320 739 aa23.09■■□□□ 1.29
CCDC130-209ENST00000588809 PRPF38BQ5VTL8 546 aaKnown RBP23.09■■□□□ 1.29
CCDC130-209ENST00000588809 TMEM179Q6ZVK1 233 aa23.09■■□□□ 1.29
CCDC130-209ENST00000588809 AMOTL1Q8IY63 956 aa23.09■■□□□ 1.29
CCDC130-209ENST00000588809 OTUD7AQ8TE49 926 aaPredicted RBP23.09■■□□□ 1.29
CCDC130-209ENST00000588809 DYNLL2Q96FJ2 89 aa23.09■■□□□ 1.29
CCDC130-209ENST00000588809 RBPJLQ9UBG7 517 aa23.09■■□□□ 1.29
CCDC130-209ENST00000588809 COL11A1P12107 1806 aaPredicted RBP23.08■■□□□ 1.29
CCDC130-209ENST00000588809 CYP2D7A0A087X1C5 515 aa23.08■■□□□ 1.29
CCDC130-209ENST00000588809 USP17L15C9J2P7 530 aa23.08■■□□□ 1.29
CCDC130-209ENST00000588809 USP17L13C9JLJ4 530 aa23.08■■□□□ 1.29
CCDC130-209ENST00000588809 USP17L11C9JVI0 530 aa23.08■■□□□ 1.29
CCDC130-209ENST00000588809 USP17L18D6R9N7 530 aa23.08■■□□□ 1.29
CCDC130-209ENST00000588809 USP17L22D6RA61 530 aa23.08■■□□□ 1.29
CCDC130-209ENST00000588809 USP17L17D6RBQ6 530 aa23.08■■□□□ 1.29
CCDC130-209ENST00000588809 USP17L19D6RCP7 530 aa23.08■■□□□ 1.29
CCDC130-209ENST00000588809 USP17L20D6RJB6 530 aa23.08■■□□□ 1.29
CCDC130-209ENST00000588809 RNF113AO15541 343 aaKnown RBP23.08■■□□□ 1.29
CCDC130-209ENST00000588809 GLRX3O76003 335 aaKnown RBP23.08■■□□□ 1.29
CCDC130-209ENST00000588809 UBXN2AP68543 259 aa23.08■■□□□ 1.29
CCDC130-209ENST00000588809 USP17L24Q0WX57 530 aa23.08■■□□□ 1.29
CCDC130-209ENST00000588809 ZYXQ15942 572 aaKnown RBP23.08■■□□□ 1.29
CCDC130-209ENST00000588809 GIMAP6Q6P9H5 292 aa23.08■■□□□ 1.29
CCDC130-209ENST00000588809 CTR9Q6PD62 1173 aa23.08■■□□□ 1.29
CCDC130-209ENST00000588809 POTEEQ6S8J3 1075 aa23.08■■□□□ 1.29
CCDC130-209ENST00000588809 C16orf86Q6ZW13 317 aa23.08■■□□□ 1.29
CCDC130-209ENST00000588809 GPRC5AQ8NFJ5 357 aa23.08■■□□□ 1.29
CCDC130-209ENST00000588809 OSBP2Q969R2 916 aa23.08■■□□□ 1.29
CCDC130-209ENST00000588809 GJD2Q9UKL4 321 aa23.08■■□□□ 1.29
CCDC130-209ENST00000588809 A0A1W2PRG0 241 aa23.07■■□□□ 1.28
CCDC130-209ENST00000588809 SMIM22K7EJ46 135 aa23.07■■□□□ 1.28
CCDC130-209ENST00000588809 MPHOSPH10O00566 681 aaKnown RBP23.07■■□□□ 1.28
CCDC130-209ENST00000588809 CCL5P13501 91 aa23.07■■□□□ 1.28
CCDC130-209ENST00000588809 ELNP15502 786 aa23.07■■□□□ 1.28
CCDC130-209ENST00000588809 MX1P20591 662 aa23.07■■□□□ 1.28
CCDC130-209ENST00000588809 ERVK-9P63128 1117 aa23.07■■□□□ 1.28
CCDC130-209ENST00000588809 ERVK-24P63145 666 aa23.07■■□□□ 1.28
CCDC130-209ENST00000588809 LBX2Q6XYB7 198 aa23.07■■□□□ 1.28
CCDC130-209ENST00000588809 CATSPERGQ6ZRH7 1159 aa23.07■■□□□ 1.28
CCDC130-209ENST00000588809 GCC1Q96CN9 775 aa23.07■■□□□ 1.28
CCDC130-209ENST00000588809 SHISA4Q96DD7 197 aa23.07■■□□□ 1.28
CCDC130-209ENST00000588809 CCDC17Q96LX7 622 aa23.07■■□□□ 1.28
CCDC130-209ENST00000588809 ARPP21Q9UBL0 812 aaPredicted RBP23.07■■□□□ 1.28
CCDC130-209ENST00000588809 ROBO3Q96MS0 1386 aa23.06■■□□□ 1.28
CCDC130-209ENST00000588809 GSG1L2A8MUP6 293 aa23.06■■□□□ 1.28
CCDC130-209ENST00000588809 GJB1P08034 283 aa23.06■■□□□ 1.28
CCDC130-209ENST00000588809 CDK8P49336 464 aa23.06■■□□□ 1.28
CCDC130-209ENST00000588809 LRRFIP1Q32MZ4 808 aaKnown RBP23.06■■□□□ 1.28
CCDC130-209ENST00000588809 SBK1Q52WX2 424 aa23.06■■□□□ 1.28
CCDC130-209ENST00000588809 BIN2Q9UBW5 565 aaPredicted RBP23.06■■□□□ 1.28
CCDC130-209ENST00000588809 PEX10O60683 326 aa23.05■■□□□ 1.28
CCDC130-209ENST00000588809 INHAP05111 366 aa23.05■■□□□ 1.28
CCDC130-209ENST00000588809 AKR1B1P15121 316 aa23.05■■□□□ 1.28
CCDC130-209ENST00000588809 GJA8P48165 433 aa23.05■■□□□ 1.28
CCDC130-209ENST00000588809 NKX2-3Q8TAU0 364 aa23.05■■□□□ 1.28
CCDC130-209ENST00000588809 RABGAP1Q9Y3P9 1069 aa23.05■■□□□ 1.28
CCDC130-209ENST00000588809 ZNF236Q9UL36 1845 aa23.05■■□□□ 1.28
CCDC130-209ENST00000588809 GPAA1O43292 621 aa23.04■■□□□ 1.28
CCDC130-209ENST00000588809 MAPK4P31152 587 aa23.04■■□□□ 1.28
CCDC130-209ENST00000588809 SIAH1Q8IUQ4 282 aa23.04■■□□□ 1.28
CCDC130-209ENST00000588809 RNF208Q9H0X6 261 aa23.04■■□□□ 1.28
CCDC130-209ENST00000588809 RPAP3Q9H6T3 665 aaPredicted RBP23.04■■□□□ 1.28
CCDC130-209ENST00000588809 ZNFX1Q9P2E3 1918 aaKnown RBP23.04■■□□□ 1.28
CCDC130-209ENST00000588809 GNAT2P19087 354 aa23.03■■□□□ 1.28
CCDC130-209ENST00000588809 Q3C1V9 767 aa23.03■■□□□ 1.28
CCDC130-209ENST00000588809 ANKRD45Q5TZF3 282 aa23.03■■□□□ 1.28
CCDC130-209ENST00000588809 UNC93B1Q9H1C4 597 aa23.03■■□□□ 1.28
CCDC130-209ENST00000588809 TMX2Q9Y320 296 aa23.03■■□□□ 1.28
CCDC130-209ENST00000588809 FRMPD3Q5JV73 1810 aa23.03■■□□□ 1.28
CCDC130-209ENST00000588809 DNAH12Q6ZR08 3092 aa23.02■■□□□ 1.28
CCDC130-209ENST00000588809 M0R2C6 588 aa23.02■■□□□ 1.28
CCDC130-209ENST00000588809 CNMDO75829 334 aa23.02■■□□□ 1.28
CCDC130-209ENST00000588809 ICA1Q05084 483 aa23.02■■□□□ 1.28
CCDC130-209ENST00000588809 SOCS4Q8WXH5 440 aa23.02■■□□□ 1.28
CCDC130-209ENST00000588809 LPAR1Q92633 364 aa23.02■■□□□ 1.28
CCDC130-209ENST00000588809 PAGR1Q9BTK6 254 aa23.02■■□□□ 1.28
CCDC130-209ENST00000588809 PORCNQ9H237 461 aa23.02■■□□□ 1.28
CCDC130-209ENST00000588809 SH2D4AQ9H788 454 aa23.02■■□□□ 1.28
CCDC130-209ENST00000588809 ARHGEF10LQ9HCE6 1279 aa23.02■■□□□ 1.28
CCDC130-209ENST00000588809 EPB41L4AQ9HCS5 686 aaPredicted RBP23.02■■□□□ 1.28
CCDC130-209ENST00000588809 STAP2Q9UGK3 403 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms