RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 RIOK1Q9BRS2 568 aaKnown RBP8.18□□□□□ -1.1
SPIDR-228ENST00000588781 MYL10Q9BUA6 226 aa8.18□□□□□ -1.1
SPIDR-228ENST00000588781 SH3GLB2Q9NR46 395 aa8.18□□□□□ -1.1
SPIDR-228ENST00000588781 RMND1Q9NWS8 449 aa8.18□□□□□ -1.1
SPIDR-228ENST00000588781 FBXO2Q9UK22 296 aaPredicted RBP8.18□□□□□ -1.1
SPIDR-228ENST00000588781 MINPP1Q9UNW1 487 aa8.18□□□□□ -1.1
SPIDR-228ENST00000588781 LEMD3Q9Y2U8 911 aa8.18□□□□□ -1.1
SPIDR-228ENST00000588781 ECM29Q5VYK3 1845 aa8.17□□□□□ -1.1
SPIDR-228ENST00000588781 ARHGAP6O43182 974 aa8.17□□□□□ -1.1
SPIDR-228ENST00000588781 SLU7O95391 586 aaKnown RBP8.17□□□□□ -1.1
SPIDR-228ENST00000588781 LMOD1P29536 600 aaPredicted RBP8.17□□□□□ -1.1
SPIDR-228ENST00000588781 GYG1P46976 350 aa8.17□□□□□ -1.1
SPIDR-228ENST00000588781 PLCD1P51178 756 aa8.17□□□□□ -1.1
SPIDR-228ENST00000588781 SPAG1Q07617 926 aa8.17□□□□□ -1.1
SPIDR-228ENST00000588781 PNOCQ13519 176 aa8.17□□□□□ -1.1
SPIDR-228ENST00000588781 MORC3Q14149 939 aa8.17□□□□□ -1.1
SPIDR-228ENST00000588781 TMTC3Q6ZXV5 915 aa8.17□□□□□ -1.1
SPIDR-228ENST00000588781 METTL16Q86W50 562 aaKnown RBP8.17□□□□□ -1.1
SPIDR-228ENST00000588781 DZIP1Q86YF9 867 aaKnown RBP8.17□□□□□ -1.1
SPIDR-228ENST00000588781 VSTM4Q8IW00 320 aa8.17□□□□□ -1.1
SPIDR-228ENST00000588781 SLF2Q8IX21 1173 aa8.17□□□□□ -1.1
SPIDR-228ENST00000588781 ENAHQ8N8S7 591 aaPredicted RBP8.17□□□□□ -1.1
SPIDR-228ENST00000588781 CCDC148Q8NFR7 591 aa8.17□□□□□ -1.1
SPIDR-228ENST00000588781 FBXW7Q969H0 707 aa8.17□□□□□ -1.1
SPIDR-228ENST00000588781 FAM84BQ96KN1 310 aaPredicted RBP8.17□□□□□ -1.1
SPIDR-228ENST00000588781 GSDMAQ96QA5 445 aa8.17□□□□□ -1.1
SPIDR-228ENST00000588781 PHF20Q9BVI0 1012 aa8.17□□□□□ -1.1
SPIDR-228ENST00000588781 NAA15Q9BXJ9 866 aaKnown RBP8.17□□□□□ -1.1
SPIDR-228ENST00000588781 SENP2Q9HC62 589 aa8.17□□□□□ -1.1
SPIDR-228ENST00000588781 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.17□□□□□ -1.1
SPIDR-228ENST00000588781 PCDHA5Q9Y5H7 936 aa8.17□□□□□ -1.1
SPIDR-228ENST00000588781 MYO5AQ9Y4I1 1855 aaKnown RBP8.17□□□□□ -1.1
SPIDR-228ENST00000588781 RGPD3A6NKT7 1758 aaPredicted RBP8.16□□□□□ -1.1
SPIDR-228ENST00000588781 NPHP1O15259 732 aa8.16□□□□□ -1.1
SPIDR-228ENST00000588781 POLR2DO15514 142 aaKnown RBP8.16□□□□□ -1.1
SPIDR-228ENST00000588781 SLFN14P0C7P3 912 aa8.16□□□□□ -1.1
SPIDR-228ENST00000588781 PLCG2P16885 1265 aa8.16□□□□□ -1.1
SPIDR-228ENST00000588781 HOXA7P31268 230 aaPredicted RBP8.16□□□□□ -1.1
SPIDR-228ENST00000588781 SARSP49591 514 aaKnown RBP8.16□□□□□ -1.1
SPIDR-228ENST00000588781 NLRP5P59047 1200 aa8.16□□□□□ -1.1
SPIDR-228ENST00000588781 TUBB4BP68371 445 aa8.16□□□□□ -1.1
SPIDR-228ENST00000588781 LONRF3Q496Y0 759 aa8.16□□□□□ -1.1
SPIDR-228ENST00000588781 TTC38Q5R3I4 469 aa8.16□□□□□ -1.1
SPIDR-228ENST00000588781 ARL6IP4Q66PJ3 421 aaKnown RBP8.16□□□□□ -1.1
SPIDR-228ENST00000588781 PHLPP2Q6ZVD8 1323 aa8.16□□□□□ -1.1
SPIDR-228ENST00000588781 RGPD4Q7Z3J3 1758 aa8.16□□□□□ -1.1
SPIDR-228ENST00000588781 ZNF804AQ7Z570 1209 aa8.16□□□□□ -1.1
SPIDR-228ENST00000588781 DGKHQ86XP1 1220 aa8.16□□□□□ -1.1
SPIDR-228ENST00000588781 HOMER1Q86YM7 354 aa8.16□□□□□ -1.1
SPIDR-228ENST00000588781 SMAP1Q8IYB5 467 aaPredicted RBP8.16□□□□□ -1.1
SPIDR-228ENST00000588781 STK11IPQ8N1F8 1099 aa8.16□□□□□ -1.1
SPIDR-228ENST00000588781 IQUBQ8NA54 791 aa8.16□□□□□ -1.1
SPIDR-228ENST00000588781 CCDC12Q8WUD4 166 aaPredicted RBP8.16□□□□□ -1.1
SPIDR-228ENST00000588781 ZNF592Q92610 1267 aa8.16□□□□□ -1.1
SPIDR-228ENST00000588781 CCDC47Q96A33 483 aaKnown RBP8.16□□□□□ -1.1
SPIDR-228ENST00000588781 NSUN4Q96CB9 384 aaKnown RBP8.16□□□□□ -1.1
SPIDR-228ENST00000588781 CLIC6Q96NY7 704 aa8.16□□□□□ -1.1
SPIDR-228ENST00000588781 ZKSCAN3Q9BRR0 538 aa8.16□□□□□ -1.1
SPIDR-228ENST00000588781 KAT14Q9H8E8 782 aa8.16□□□□□ -1.1
SPIDR-228ENST00000588781 CABP5Q9NP86 173 aa8.16□□□□□ -1.1
SPIDR-228ENST00000588781 GJB4Q9NTQ9 266 aa8.16□□□□□ -1.1
SPIDR-228ENST00000588781 SERTAD1Q9UHV2 236 aa8.16□□□□□ -1.1
SPIDR-228ENST00000588781 MAN1B1Q9UKM7 699 aa8.16□□□□□ -1.1
SPIDR-228ENST00000588781 KCNJ14Q9UNX9 436 aa8.16□□□□□ -1.1
SPIDR-228ENST00000588781 DLEC1Q9Y238 1755 aa8.16□□□□□ -1.1
SPIDR-228ENST00000588781 RTCBQ9Y3I0 505 aaKnown RBP8.16□□□□□ -1.1
SPIDR-228ENST00000588781 GOLGB1Q14789 3259 aaKnown RBP8.16□□□□□ -1.1
SPIDR-228ENST00000588781 A0A1B0GUL6 1792 aa8.15□□□□□ -1.1
SPIDR-228ENST00000588781 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.15□□□□□ -1.1
SPIDR-228ENST00000588781 TSPY2A6NKD2 308 aa8.15□□□□□ -1.1
SPIDR-228ENST00000588781 LAD1O00515 517 aa8.15□□□□□ -1.1
SPIDR-228ENST00000588781 STX10O60499 249 aa8.15□□□□□ -1.1
SPIDR-228ENST00000588781 MYL1P05976 194 aa8.15□□□□□ -1.1
SPIDR-228ENST00000588781 SCG2P13521 617 aa8.15□□□□□ -1.1
SPIDR-228ENST00000588781 LONP1P36776 959 aaKnown RBP8.15□□□□□ -1.1
SPIDR-228ENST00000588781 PPP1R2P41236 205 aa8.15□□□□□ -1.1
SPIDR-228ENST00000588781 USP5P45974 858 aa8.15□□□□□ -1.1
SPIDR-228ENST00000588781 TOB1P50616 345 aaPredicted RBP8.15□□□□□ -1.1
SPIDR-228ENST00000588781 MDM2Q00987 491 aaPredicted RBP8.15□□□□□ -1.1
SPIDR-228ENST00000588781 MECOMQ03112 1051 aa8.15□□□□□ -1.1
SPIDR-228ENST00000588781 TUBB2AQ13885 445 aa8.15□□□□□ -1.1
SPIDR-228ENST00000588781 TRIM14Q14142 442 aa8.15□□□□□ -1.1
SPIDR-228ENST00000588781 SPATA1Q5VX52 437 aa8.15□□□□□ -1.1
SPIDR-228ENST00000588781 SPECC1LQ69YQ0 1117 aa8.15□□□□□ -1.1
SPIDR-228ENST00000588781 CTR9Q6PD62 1173 aa8.15□□□□□ -1.1
SPIDR-228ENST00000588781 C15orf52Q6ZUT6 534 aaKnown RBP8.15□□□□□ -1.1
SPIDR-228ENST00000588781 PPFIBP1Q86W92 1011 aa8.15□□□□□ -1.1
SPIDR-228ENST00000588781 LINC00116Q8NCU8 138 aa8.15□□□□□ -1.1
SPIDR-228ENST00000588781 ZNF397Q8NF99 534 aaPredicted RBP8.15□□□□□ -1.1
SPIDR-228ENST00000588781 SDR42E1Q8WUS8 393 aa8.15□□□□□ -1.1
SPIDR-228ENST00000588781 ANKS1AQ92625 1134 aa8.15□□□□□ -1.1
SPIDR-228ENST00000588781 CCDC51Q96ER9 411 aa8.15□□□□□ -1.1
SPIDR-228ENST00000588781 TUBB2BQ9BVA1 445 aa8.15□□□□□ -1.1
SPIDR-228ENST00000588781 MAGEF1Q9HAY2 307 aa8.15□□□□□ -1.1
SPIDR-228ENST00000588781 TCP11L1Q9NUJ3 509 aa8.15□□□□□ -1.1
SPIDR-228ENST00000588781 ARGLU1Q9NWB6 273 aaPredicted RBP8.15□□□□□ -1.1
SPIDR-228ENST00000588781 PCDHB6Q9Y5E3 794 aa8.15□□□□□ -1.1
SPIDR-228ENST00000588781 LAMB1P07942 1786 aa8.15□□□□□ -1.11
SPIDR-228ENST00000588781 COL24A1Q17RW2 1714 aa8.15□□□□□ -1.11
SPIDR-228ENST00000588781 CNTNAP5Q8WYK1 1306 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms