RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 STRBPQ96SI9 672 aaKnown RBP17.35■□□□□ 0.37
DDX39A-208ENST00000588692 USP17L12C9JPN9 530 aa17.34■□□□□ 0.37
DDX39A-208ENST00000588692 USP17L21D6R901 530 aa17.34■□□□□ 0.37
DDX39A-208ENST00000588692 MPHOSPH10O00566 681 aaKnown RBP17.34■□□□□ 0.37
DDX39A-208ENST00000588692 GNAT2P19087 354 aa17.34■□□□□ 0.37
DDX39A-208ENST00000588692 GUCY1A2P33402 732 aa17.34■□□□□ 0.37
DDX39A-208ENST00000588692 HERVK_113P62684 666 aa17.34■□□□□ 0.37
DDX39A-208ENST00000588692 SLAIN1Q8ND83 568 aa17.34■□□□□ 0.37
DDX39A-208ENST00000588692 CCDC17Q96LX7 622 aa17.34■□□□□ 0.37
DDX39A-208ENST00000588692 POTEFA5A3E0 1075 aa17.33■□□□□ 0.37
DDX39A-208ENST00000588692 IRF5Q13568 498 aa17.33■□□□□ 0.37
DDX39A-208ENST00000588692 SEPT2Q15019 361 aa17.33■□□□□ 0.37
DDX39A-208ENST00000588692 ZYXQ15942 572 aaKnown RBP17.33■□□□□ 0.37
DDX39A-208ENST00000588692 CTR9Q6PD62 1173 aa17.33■□□□□ 0.37
DDX39A-208ENST00000588692 C16orf86Q6ZW13 317 aa17.33■□□□□ 0.37
DDX39A-208ENST00000588692 SLC44A5Q8NCS7 719 aa17.33■□□□□ 0.37
DDX39A-208ENST00000588692 OSBP2Q969R2 916 aa17.33■□□□□ 0.37
DDX39A-208ENST00000588692 DYNLL2Q96FJ2 89 aa17.33■□□□□ 0.37
DDX39A-208ENST00000588692 P2RX7Q99572 595 aaKnown RBP17.33■□□□□ 0.37
DDX39A-208ENST00000588692 PDE4DIPQ5VU43 2346 aa17.33■□□□□ 0.36
DDX39A-208ENST00000588692 USP17L15C9J2P7 530 aa17.32■□□□□ 0.36
DDX39A-208ENST00000588692 USP17L13C9JLJ4 530 aa17.32■□□□□ 0.36
DDX39A-208ENST00000588692 USP17L11C9JVI0 530 aa17.32■□□□□ 0.36
DDX39A-208ENST00000588692 USP17L18D6R9N7 530 aa17.32■□□□□ 0.36
DDX39A-208ENST00000588692 USP17L22D6RA61 530 aa17.32■□□□□ 0.36
DDX39A-208ENST00000588692 USP17L17D6RBQ6 530 aa17.32■□□□□ 0.36
DDX39A-208ENST00000588692 USP17L19D6RCP7 530 aa17.32■□□□□ 0.36
DDX39A-208ENST00000588692 USP17L20D6RJB6 530 aa17.32■□□□□ 0.36
DDX39A-208ENST00000588692 GPAA1O43292 621 aa17.32■□□□□ 0.36
DDX39A-208ENST00000588692 VCAM1P19320 739 aa17.32■□□□□ 0.36
DDX39A-208ENST00000588692 CDK8P49336 464 aa17.32■□□□□ 0.36
DDX39A-208ENST00000588692 FLT3LGP49771 235 aa17.32■□□□□ 0.36
DDX39A-208ENST00000588692 USP17L24Q0WX57 530 aa17.32■□□□□ 0.36
DDX39A-208ENST00000588692 ACER1Q8TDN7 264 aa17.32■□□□□ 0.36
DDX39A-208ENST00000588692 PXYLP1Q8TE99 480 aa17.32■□□□□ 0.36
DDX39A-208ENST00000588692 FSD1Q9BTV5 496 aa17.32■□□□□ 0.36
DDX39A-208ENST00000588692 RWDD1Q9H446 243 aaPredicted RBP17.32■□□□□ 0.36
DDX39A-208ENST00000588692 GABRQQ9UN88 632 aa17.32■□□□□ 0.36
DDX39A-208ENST00000588692 DOCK3Q8IZD9 2030 aa17.32■□□□□ 0.36
DDX39A-208ENST00000588692 CYP2D7A0A087X1C5 515 aa17.31■□□□□ 0.36
DDX39A-208ENST00000588692 GSG1L2A8MUP6 293 aa17.31■□□□□ 0.36
DDX39A-208ENST00000588692 UBXN2AP68543 259 aa17.31■□□□□ 0.36
DDX39A-208ENST00000588692 SBK1Q52WX2 424 aa17.31■□□□□ 0.36
DDX39A-208ENST00000588692 GPRC5AQ8NFJ5 357 aa17.31■□□□□ 0.36
DDX39A-208ENST00000588692 SH2D4AQ9H788 454 aa17.31■□□□□ 0.36
DDX39A-208ENST00000588692 STAP2Q9UGK3 403 aa17.31■□□□□ 0.36
DDX39A-208ENST00000588692 ROBO3Q96MS0 1386 aa17.31■□□□□ 0.36
DDX39A-208ENST00000588692 ARHGEF10LQ9HCE6 1279 aa17.31■□□□□ 0.36
DDX39A-208ENST00000588692 M0R2C6 588 aa17.3■□□□□ 0.36
DDX39A-208ENST00000588692 ADCY3O60266 1144 aa17.3■□□□□ 0.36
DDX39A-208ENST00000588692 AKR1B1P15121 316 aa17.3■□□□□ 0.36
DDX39A-208ENST00000588692 ICA1Q05084 483 aa17.3■□□□□ 0.36
DDX39A-208ENST00000588692 LBX2Q6XYB7 198 aa17.3■□□□□ 0.36
DDX39A-208ENST00000588692 CATSPERGQ6ZRH7 1159 aa17.3■□□□□ 0.36
DDX39A-208ENST00000588692 SMC5Q8IY18 1101 aa17.3■□□□□ 0.36
DDX39A-208ENST00000588692 TXNRD2Q9NNW7 524 aa17.3■□□□□ 0.36
DDX39A-208ENST00000588692 RBPJLQ9UBG7 517 aa17.3■□□□□ 0.36
DDX39A-208ENST00000588692 GREB1LQ9C091 1923 aaPredicted RBP17.3■□□□□ 0.36
DDX39A-208ENST00000588692 BRCA2P51587 3418 aa17.29■□□□□ 0.36
DDX39A-208ENST00000588692 A0A1W2PRG0 241 aa17.29■□□□□ 0.36
DDX39A-208ENST00000588692 MAPK4P31152 587 aa17.29■□□□□ 0.36
DDX39A-208ENST00000588692 PDE1AP54750 535 aa17.29■□□□□ 0.36
DDX39A-208ENST00000588692 ERVK-9P63128 1117 aa17.29■□□□□ 0.36
DDX39A-208ENST00000588692 ERVK-24P63145 666 aa17.29■□□□□ 0.36
DDX39A-208ENST00000588692 ZMYM1Q5SVZ6 1142 aa17.29■□□□□ 0.36
DDX39A-208ENST00000588692 LPAR1Q92633 364 aa17.29■□□□□ 0.36
DDX39A-208ENST00000588692 EVI5LQ96CN4 794 aa17.29■□□□□ 0.36
DDX39A-208ENST00000588692 BIN2Q9UBW5 565 aaPredicted RBP17.29■□□□□ 0.36
DDX39A-208ENST00000588692 RABGAP1Q9Y3P9 1069 aa17.29■□□□□ 0.36
DDX39A-208ENST00000588692 PLXNB2O15031 1838 aa17.28■□□□□ 0.36
DDX39A-208ENST00000588692 SMIM22K7EJ46 135 aa17.28■□□□□ 0.36
DDX39A-208ENST00000588692 MYCP01106 439 aaPredicted RBP17.28■□□□□ 0.36
DDX39A-208ENST00000588692 EN2P19622 333 aaPredicted RBP17.28■□□□□ 0.36
DDX39A-208ENST00000588692 TDO2P48775 406 aa17.28■□□□□ 0.36
DDX39A-208ENST00000588692 MTFR1Q15390 333 aa17.28■□□□□ 0.36
DDX39A-208ENST00000588692 TICAM2Q86XR7 235 aa17.28■□□□□ 0.36
DDX39A-208ENST00000588692 EXOC6Q8TAG9 804 aa17.28■□□□□ 0.36
DDX39A-208ENST00000588692 NKX2-3Q8TAU0 364 aa17.28■□□□□ 0.36
DDX39A-208ENST00000588692 NACAP1Q9BZK3 213 aa17.28■□□□□ 0.36
DDX39A-208ENST00000588692 RPAP3Q9H6T3 665 aaPredicted RBP17.28■□□□□ 0.36
DDX39A-208ENST00000588692 KANSL2Q9H9L4 492 aa17.28■□□□□ 0.36
DDX39A-208ENST00000588692 EPB41L4AQ9HCS5 686 aaPredicted RBP17.28■□□□□ 0.36
DDX39A-208ENST00000588692 TMX2Q9Y320 296 aa17.28■□□□□ 0.36
DDX39A-208ENST00000588692 A0A0G2JMZ2 1700 aa17.28■□□□□ 0.36
DDX39A-208ENST00000588692 PATL2C9JE40 543 aaKnown RBP17.27■□□□□ 0.36
DDX39A-208ENST00000588692 APPP05067 770 aa17.27■□□□□ 0.36
DDX39A-208ENST00000588692 CCNA1P78396 465 aa17.27■□□□□ 0.36
DDX39A-208ENST00000588692 SOCS4Q8WXH5 440 aa17.27■□□□□ 0.36
DDX39A-208ENST00000588692 PAGR1Q9BTK6 254 aa17.27■□□□□ 0.36
DDX39A-208ENST00000588692 ZNF287Q9HBT7 754 aa17.27■□□□□ 0.36
DDX39A-208ENST00000588692 MINDY4BA8MYZ0 360 aa17.26■□□□□ 0.35
DDX39A-208ENST00000588692 CCL5P13501 91 aa17.26■□□□□ 0.35
DDX39A-208ENST00000588692 ELNP15502 786 aa17.26■□□□□ 0.35
DDX39A-208ENST00000588692 CCAR1Q8IX12 1150 aaKnown RBP17.26■□□□□ 0.35
DDX39A-208ENST00000588692 IFNL3Q8IZI9 196 aa17.26■□□□□ 0.35
DDX39A-208ENST00000588692 LNPKQ9C0E8 428 aa17.26■□□□□ 0.35
DDX39A-208ENST00000588692 GJD2Q9UKL4 321 aa17.26■□□□□ 0.35
DDX39A-208ENST00000588692 RLFQ13129 1914 aa17.26■□□□□ 0.35
DDX39A-208ENST00000588692 SPDYE16A6NNV3 312 aaPredicted RBP17.25■□□□□ 0.35
DDX39A-208ENST00000588692 INHAP05111 366 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms