RNA–Protein interactions for RNA: ENST00000588631.5

PIK3C3-209, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

TSL 4

Gene PIK3C3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3-209ENST00000588631 SUPT16HQ9Y5B9 1047 aaKnown RBP6.84□□□□□ -1.31
PIK3C3-209ENST00000588631 RAP1GAPP47736 663 aa6.83□□□□□ -1.32
PIK3C3-209ENST00000588631 CLCN7P51798 805 aa6.83□□□□□ -1.32
PIK3C3-209ENST00000588631 SNAP47Q5SQN1 464 aa6.83□□□□□ -1.32
PIK3C3-209ENST00000588631 FYB2Q5VWT5 728 aa6.83□□□□□ -1.32
PIK3C3-209ENST00000588631 MAP1SQ66K74 1059 aaPredicted RBP6.83□□□□□ -1.32
PIK3C3-209ENST00000588631 MPRIPQ6WCQ1 1025 aa6.83□□□□□ -1.32
PIK3C3-209ENST00000588631 CCDC84Q86UT8 332 aaPredicted RBP6.83□□□□□ -1.32
PIK3C3-209ENST00000588631 SREK1Q8WXA9 508 aaKnown RBP6.83□□□□□ -1.32
PIK3C3-209ENST00000588631 JARID2Q92833 1246 aaPredicted RBP6.83□□□□□ -1.32
PIK3C3-209ENST00000588631 GPRASP2Q96D09 838 aa6.83□□□□□ -1.32
PIK3C3-209ENST00000588631 LIN37Q96GY3 246 aaPredicted RBP6.83□□□□□ -1.32
PIK3C3-209ENST00000588631 EAF1Q96JC9 268 aaPredicted RBP6.83□□□□□ -1.32
PIK3C3-209ENST00000588631 PPP1R16BQ96T49 567 aa6.83□□□□□ -1.32
PIK3C3-209ENST00000588631 NT5C1AQ9BXI3 368 aa6.83□□□□□ -1.32
PIK3C3-209ENST00000588631 SSU72Q9NP77 194 aaKnown RBP6.83□□□□□ -1.32
PIK3C3-209ENST00000588631 SEPT6Q14141 434 aa6.82□□□□□ -1.32
PIK3C3-209ENST00000588631 SCARA3Q6AZY7 606 aa6.82□□□□□ -1.32
PIK3C3-209ENST00000588631 BNC2Q6ZN30 1099 aaPredicted RBP6.82□□□□□ -1.32
PIK3C3-209ENST00000588631 UBE3DQ7Z6J8 389 aa6.82□□□□□ -1.32
PIK3C3-209ENST00000588631 VPS37DQ86XT2 251 aa6.82□□□□□ -1.32
PIK3C3-209ENST00000588631 RASGRP4Q8TDF6 673 aa6.82□□□□□ -1.32
PIK3C3-209ENST00000588631 GPBAR1Q8TDU6 330 aa6.82□□□□□ -1.32
PIK3C3-209ENST00000588631 PRDM10Q9NQV6 1147 aa6.82□□□□□ -1.32
PIK3C3-209ENST00000588631 USP35Q9P2H5 1018 aa6.82□□□□□ -1.32
PIK3C3-209ENST00000588631 IGSF3O75054 1194 aa6.81□□□□□ -1.32
PIK3C3-209ENST00000588631 TRIM37O94972 964 aa6.81□□□□□ -1.32
PIK3C3-209ENST00000588631 F13A1P00488 732 aa6.81□□□□□ -1.32
PIK3C3-209ENST00000588631 KRT1P04264 644 aa6.81□□□□□ -1.32
PIK3C3-209ENST00000588631 GLI1P08151 1106 aa6.81□□□□□ -1.32
PIK3C3-209ENST00000588631 ZNF865P0CJ78 1059 aaPredicted RBP6.81□□□□□ -1.32
PIK3C3-209ENST00000588631 ARID5AQ03989 594 aa6.81□□□□□ -1.32
PIK3C3-209ENST00000588631 LCE5AQ5TCM9 118 aa6.81□□□□□ -1.32
PIK3C3-209ENST00000588631 FAM196AQ6ZSG2 479 aa6.81□□□□□ -1.32
PIK3C3-209ENST00000588631 LRRC56Q8IYG6 542 aaPredicted RBP6.81□□□□□ -1.32
PIK3C3-209ENST00000588631 GATAD2BQ8WXI9 593 aa6.81□□□□□ -1.32
PIK3C3-209ENST00000588631 DRC1Q96MC2 740 aa6.81□□□□□ -1.32
PIK3C3-209ENST00000588631 GMLQ99445 158 aa6.81□□□□□ -1.32
PIK3C3-209ENST00000588631 UBP1Q9NZI7 540 aa6.81□□□□□ -1.32
PIK3C3-209ENST00000588631 ROBO2Q9HCK4 1378 aa6.81□□□□□ -1.32
PIK3C3-209ENST00000588631 FAM221AA4D161 298 aa6.8□□□□□ -1.32
PIK3C3-209ENST00000588631 EOMESO95936 686 aa6.8□□□□□ -1.32
PIK3C3-209ENST00000588631 DNAJA1P31689 397 aaKnown RBP6.8□□□□□ -1.32
PIK3C3-209ENST00000588631 AFMP43652 599 aa6.8□□□□□ -1.32
PIK3C3-209ENST00000588631 PTPN11Q06124 597 aaPredicted RBP6.8□□□□□ -1.32
PIK3C3-209ENST00000588631 RING1Q06587 406 aa6.8□□□□□ -1.32
PIK3C3-209ENST00000588631 SF3A1Q15459 793 aaKnown RBP6.8□□□□□ -1.32
PIK3C3-209ENST00000588631 DIEXFQ68CQ4 756 aaKnown RBP6.8□□□□□ -1.32
PIK3C3-209ENST00000588631 SPATA32Q96LK8 384 aa6.8□□□□□ -1.32
PIK3C3-209ENST00000588631 C19orf73Q9NVV2 129 aa6.8□□□□□ -1.32
PIK3C3-209ENST00000588631 LMCD1Q9NZU5 365 aa6.8□□□□□ -1.32
PIK3C3-209ENST00000588631 CILPO75339 1184 aa6.79□□□□□ -1.32
PIK3C3-209ENST00000588631 ATF4P18848 351 aaPredicted RBP6.79□□□□□ -1.32
PIK3C3-209ENST00000588631 APOBRQ0VD83 1088 aa6.79□□□□□ -1.32
PIK3C3-209ENST00000588631 PPM1JQ5JR12 505 aa6.79□□□□□ -1.32
PIK3C3-209ENST00000588631 PRR23BQ6ZRT6 265 aa6.79□□□□□ -1.32
PIK3C3-209ENST00000588631 SIAH1Q8IUQ4 282 aa6.79□□□□□ -1.32
PIK3C3-209ENST00000588631 ZSCAN18Q8TBC5 510 aaPredicted RBP6.79□□□□□ -1.32
PIK3C3-209ENST00000588631 NKD1Q969G9 470 aa6.79□□□□□ -1.32
PIK3C3-209ENST00000588631 GAL3ST3Q96A11 431 aa6.79□□□□□ -1.32
PIK3C3-209ENST00000588631 TANGO6Q9C0B7 1094 aa6.79□□□□□ -1.32
PIK3C3-209ENST00000588631 PPP1R1BQ9UD71 204 aaPredicted RBP6.79□□□□□ -1.32
PIK3C3-209ENST00000588631 MAPK8IP1Q9UQF2 711 aa6.79□□□□□ -1.32
PIK3C3-209ENST00000588631 TLR3O15455 904 aaKnown RBP6.78□□□□□ -1.32
PIK3C3-209ENST00000588631 CRKP46108 304 aa6.78□□□□□ -1.32
PIK3C3-209ENST00000588631 MPP2Q14168 576 aa6.78□□□□□ -1.32
PIK3C3-209ENST00000588631 SYDE1Q6ZW31 735 aaPredicted RBP6.78□□□□□ -1.32
PIK3C3-209ENST00000588631 FBXO27Q8NI29 283 aa6.78□□□□□ -1.32
PIK3C3-209ENST00000588631 ACSBG1Q96GR2 724 aa6.78□□□□□ -1.32
PIK3C3-209ENST00000588631 KIRREL1Q96J84 757 aa6.78□□□□□ -1.32
PIK3C3-209ENST00000588631 SEC16BQ96JE7 1060 aa6.78□□□□□ -1.32
PIK3C3-209ENST00000588631 GNAT3A8MTJ3 354 aa6.77□□□□□ -1.33
PIK3C3-209ENST00000588631 BPNT1O95861 308 aa6.77□□□□□ -1.33
PIK3C3-209ENST00000588631 ATP2B1P20020 1258 aa6.77□□□□□ -1.33
PIK3C3-209ENST00000588631 SEZ6Q53EL9 994 aa6.77□□□□□ -1.33
PIK3C3-209ENST00000588631 ZBTB37Q5TC79 503 aa6.77□□□□□ -1.33
PIK3C3-209ENST00000588631 LILRA6Q6PI73 481 aa6.77□□□□□ -1.33
PIK3C3-209ENST00000588631 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.77□□□□□ -1.33
PIK3C3-209ENST00000588631 CYFIP1Q7L576 1253 aa6.77□□□□□ -1.33
PIK3C3-209ENST00000588631 SLITRK4Q8IW52 837 aa6.77□□□□□ -1.33
PIK3C3-209ENST00000588631 LRRC3Q9BY71 257 aa6.77□□□□□ -1.33
PIK3C3-209ENST00000588631 PRDM5Q9NQX1 630 aaPredicted RBP6.77□□□□□ -1.33
PIK3C3-209ENST00000588631 SEMA3GQ9NS98 782 aa6.77□□□□□ -1.33
PIK3C3-209ENST00000588631 GINM1Q9NU53 330 aa6.77□□□□□ -1.33
PIK3C3-209ENST00000588631 PCDHA4Q9UN74 947 aa6.77□□□□□ -1.33
PIK3C3-209ENST00000588631 EFR3BQ9Y2G0 817 aa6.77□□□□□ -1.33
PIK3C3-209ENST00000588631 NCANO14594 1321 aa6.76□□□□□ -1.33
PIK3C3-209ENST00000588631 FANCGO15287 622 aa6.76□□□□□ -1.33
PIK3C3-209ENST00000588631 C1QTNF9P0C862 333 aa6.76□□□□□ -1.33
PIK3C3-209ENST00000588631 ZSCAN22P10073 491 aaPredicted RBP6.76□□□□□ -1.33
PIK3C3-209ENST00000588631 RPL6Q02878 288 aaKnown RBP6.76□□□□□ -1.33
PIK3C3-209ENST00000588631 COL9A2Q14055 689 aaPredicted RBP6.76□□□□□ -1.33
PIK3C3-209ENST00000588631 CWF19L2Q2TBE0 894 aaKnown RBP6.76□□□□□ -1.33
PIK3C3-209ENST00000588631 C22orf34Q6ZV56 151 aa6.76□□□□□ -1.33
PIK3C3-209ENST00000588631 ANKLE2Q86XL3 938 aa6.76□□□□□ -1.33
PIK3C3-209ENST00000588631 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.76□□□□□ -1.333e-7■■■■■ 35.2
PIK3C3-209ENST00000588631 FOXQ1Q9C009 403 aa6.76□□□□□ -1.33
PIK3C3-209ENST00000588631 CARS2Q9HA77 564 aaKnown RBP6.76□□□□□ -1.33
PIK3C3-209ENST00000588631 RAPGEFL1Q9UHV5 662 aa6.76□□□□□ -1.33
PIK3C3-209ENST00000588631 SOX9P48436 509 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms