RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 CLEC17AQ6ZS10 378 aa30.38■■■□□ 2.45
SCAMP4-210ENST00000588555 CALM1P0DP23 149 aa30.37■■■□□ 2.45
SCAMP4-210ENST00000588555 CALM2P0DP24 149 aa30.37■■■□□ 2.45
SCAMP4-210ENST00000588555 CALM3P0DP25 149 aa30.37■■■□□ 2.45
SCAMP4-210ENST00000588555 TMEM39BQ9GZU3 492 aa30.37■■■□□ 2.45
SCAMP4-210ENST00000588555 KAT14Q9H8E8 782 aa30.37■■■□□ 2.45
SCAMP4-210ENST00000588555 H7C1D1 291 aa30.36■■■□□ 2.45
SCAMP4-210ENST00000588555 CDKL5O76039 1030 aa30.36■■■□□ 2.45
SCAMP4-210ENST00000588555 ZSCAN22P10073 491 aaPredicted RBP30.36■■■□□ 2.45
SCAMP4-210ENST00000588555 CPLX2Q6PUV4 134 aaKnown RBP30.36■■■□□ 2.45
SCAMP4-210ENST00000588555 FAM184AQ8NB25 1140 aa30.36■■■□□ 2.45
SCAMP4-210ENST00000588555 CCDC17Q96LX7 622 aa30.36■■■□□ 2.45
SCAMP4-210ENST00000588555 STX8Q9UNK0 236 aa30.36■■■□□ 2.45
SCAMP4-210ENST00000588555 CCDC196A0A1B0GTZ2 297 aa30.36■■■□□ 2.45
SCAMP4-210ENST00000588555 IFNAR1P17181 557 aa30.36■■■□□ 2.45
SCAMP4-210ENST00000588555 FOXD4L5Q5VV16 416 aaPredicted RBP30.36■■■□□ 2.45
SCAMP4-210ENST00000588555 PNMA1Q8ND90 353 aa30.36■■■□□ 2.45
SCAMP4-210ENST00000588555 FOXD4L4Q8WXT5 416 aaPredicted RBP30.36■■■□□ 2.45
SCAMP4-210ENST00000588555 TMEM47Q9BQJ4 181 aa30.36■■■□□ 2.45
SCAMP4-210ENST00000588555 ASTN2O75129 1339 aaPredicted RBP30.35■■■□□ 2.45
SCAMP4-210ENST00000588555 CDAN1Q8IWY9 1227 aa30.35■■■□□ 2.45
SCAMP4-210ENST00000588555 MTMR4Q9NYA4 1195 aa30.35■■■□□ 2.45
SCAMP4-210ENST00000588555 HERC5Q9UII4 1024 aaKnown RBP30.35■■■□□ 2.45
SCAMP4-210ENST00000588555 KIF3AQ9Y496 699 aa30.35■■■□□ 2.45
SCAMP4-210ENST00000588555 GPR162Q16538 588 aa30.34■■■□□ 2.45
SCAMP4-210ENST00000588555 TRIM34Q9BYJ4 488 aa30.34■■■□□ 2.45
SCAMP4-210ENST00000588555 ORC3Q9UBD5 711 aaPredicted RBP30.34■■■□□ 2.45
SCAMP4-210ENST00000588555 DDNO94850 711 aaPredicted RBP30.33■■■□□ 2.45
SCAMP4-210ENST00000588555 PHKBQ93100 1093 aa30.33■■■□□ 2.45
SCAMP4-210ENST00000588555 CERKLQ49MI3 558 aaPredicted RBP30.33■■■□□ 2.45
SCAMP4-210ENST00000588555 TRPM4Q8TD43 1214 aa30.33■■■□□ 2.45
SCAMP4-210ENST00000588555 MAP3K14Q99558 947 aa30.33■■■□□ 2.45
SCAMP4-210ENST00000588555 RBM28Q9NW13 759 aaKnown RBP30.33■■■□□ 2.45
SCAMP4-210ENST00000588555 STK36Q9NRP7 1315 aa30.32■■■□□ 2.44
SCAMP4-210ENST00000588555 VPS37CA5D8V6 355 aaPredicted RBP30.32■■■□□ 2.44
SCAMP4-210ENST00000588555 EPS15P42566 896 aa30.32■■■□□ 2.44
SCAMP4-210ENST00000588555 TNNI2P48788 182 aa30.32■■■□□ 2.44
SCAMP4-210ENST00000588555 TNFAIP1Q13829 316 aa30.32■■■□□ 2.44
SCAMP4-210ENST00000588555 RASA3Q14644 834 aa30.32■■■□□ 2.44
SCAMP4-210ENST00000588555 CDC37L1Q7L3B6 337 aa30.32■■■□□ 2.44
SCAMP4-210ENST00000588555 NBPF11Q86T75 865 aa30.32■■■□□ 2.44
SCAMP4-210ENST00000588555 HACL1Q9UJ83 578 aa30.32■■■□□ 2.44
SCAMP4-210ENST00000588555 SOCS7O14512 581 aa30.31■■■□□ 2.44
SCAMP4-210ENST00000588555 TOP1P11387 765 aaKnown RBP30.31■■■□□ 2.44
SCAMP4-210ENST00000588555 FMNL1O95466 1100 aaPredicted RBP30.31■■■□□ 2.44
SCAMP4-210ENST00000588555 F13A1P00488 732 aa30.31■■■□□ 2.44
SCAMP4-210ENST00000588555 FUT2Q10981 343 aa30.31■■■□□ 2.44
SCAMP4-210ENST00000588555 SHROOM1Q2M3G4 852 aaPredicted RBP30.31■■■□□ 2.44
SCAMP4-210ENST00000588555 TEPSINQ96N21 525 aa30.31■■■□□ 2.44
SCAMP4-210ENST00000588555 SCAF8Q9UPN6 1271 aaKnown RBP30.31■■■□□ 2.44
SCAMP4-210ENST00000588555 TBC1D12O60347 775 aa30.3■■■□□ 2.44
SCAMP4-210ENST00000588555 BAG4O95429 457 aaKnown RBP30.3■■■□□ 2.44
SCAMP4-210ENST00000588555 CLEC10AQ8IUN9 316 aa30.3■■■□□ 2.44
SCAMP4-210ENST00000588555 CMTR1Q8N1G2 835 aaKnown RBP30.3■■■□□ 2.44
SCAMP4-210ENST00000588555 CTCFLQ8NI51 663 aaPredicted RBP30.3■■■□□ 2.44
SCAMP4-210ENST00000588555 GBP4Q96PP9 640 aa30.3■■■□□ 2.44
SCAMP4-210ENST00000588555 XPO5Q9HAV4 1204 aaKnown RBP eCLIP30.3■■■□□ 2.44
SCAMP4-210ENST00000588555 MPHOSPH10O00566 681 aaKnown RBP30.29■■■□□ 2.44
SCAMP4-210ENST00000588555 MAP3K10Q02779 954 aa30.29■■■□□ 2.44
SCAMP4-210ENST00000588555 RRP1BQ14684 758 aaKnown RBP30.29■■■□□ 2.44
SCAMP4-210ENST00000588555 TMTC3Q6ZXV5 915 aa30.29■■■□□ 2.44
SCAMP4-210ENST00000588555 GRIN3BO60391 1043 aa30.28■■■□□ 2.44
SCAMP4-210ENST00000588555 PLEKHA8P1O95397 391 aa30.28■■■□□ 2.44
SCAMP4-210ENST00000588555 MCM4P33991 863 aa30.28■■■□□ 2.44
SCAMP4-210ENST00000588555 TTLL1O95922 423 aa30.28■■■□□ 2.44
SCAMP4-210ENST00000588555 HIRAP54198 1017 aaPredicted RBP30.28■■■□□ 2.44
SCAMP4-210ENST00000588555 SSRP1Q08945 709 aaKnown RBP30.28■■■□□ 2.44
SCAMP4-210ENST00000588555 GRM4Q14833 912 aa30.28■■■□□ 2.44
SCAMP4-210ENST00000588555 SLC26A6Q9BXS9 759 aa30.28■■■□□ 2.44
SCAMP4-210ENST00000588555 JAG1P78504 1218 aa30.27■■■□□ 2.44
SCAMP4-210ENST00000588555 UBE2Q2LH0YL09 131 aa30.26■■■□□ 2.44
SCAMP4-210ENST00000588555 GDF11O95390 407 aa30.26■■■□□ 2.44
SCAMP4-210ENST00000588555 KIF5BP33176 963 aa30.26■■■□□ 2.44
SCAMP4-210ENST00000588555 GUCY1A2P33402 732 aa30.26■■■□□ 2.44
SCAMP4-210ENST00000588555 ABCB5Q2M3G0 1257 aa30.26■■■□□ 2.44
SCAMP4-210ENST00000588555 TMEM179Q6ZVK1 233 aa30.26■■■□□ 2.44
SCAMP4-210ENST00000588555 CCDC82Q8N4S0 544 aa30.26■■■□□ 2.44
SCAMP4-210ENST00000588555 MAD2L2Q9UI95 211 aa30.26■■■□□ 2.44
SCAMP4-210ENST00000588555 H3BQV1 296 aa30.26■■■□□ 2.43
SCAMP4-210ENST00000588555 IFFO2Q5TF58 517 aa30.26■■■□□ 2.43
SCAMP4-210ENST00000588555 CHAMP1Q96JM3 812 aa30.26■■■□□ 2.43
SCAMP4-210ENST00000588555 RNF26Q9BY78 433 aaPredicted RBP30.26■■■□□ 2.43
SCAMP4-210ENST00000588555 DEFB129Q9H1M3 183 aa30.26■■■□□ 2.43
SCAMP4-210ENST00000588555 MYH4Q9Y623 1939 aa30.25■■■□□ 2.43
SCAMP4-210ENST00000588555 PPP4R3BQ5MIZ7 849 aa30.25■■■□□ 2.43
SCAMP4-210ENST00000588555 ANGEL2Q5VTE6 544 aaKnown RBP30.25■■■□□ 2.43
SCAMP4-210ENST00000588555 SRBD1Q8N5C6 995 aaKnown RBP30.25■■■□□ 2.43
SCAMP4-210ENST00000588555 RGS22Q8NE09 1264 aa30.25■■■□□ 2.43
SCAMP4-210ENST00000588555 AIFM3Q96NN9 605 aa30.25■■■□□ 2.43
SCAMP4-210ENST00000588555 CLIP2Q9UDT6 1046 aa30.25■■■□□ 2.43
SCAMP4-210ENST00000588555 ZC3H4Q9UPT8 1303 aaKnown RBP30.25■■■□□ 2.43
SCAMP4-210ENST00000588555 FOSBP53539 338 aa30.24■■■□□ 2.43
SCAMP4-210ENST00000588555 TRIM22Q8IYM9 498 aa30.24■■■□□ 2.43
SCAMP4-210ENST00000588555 ALG1Q9BT22 464 aa30.24■■■□□ 2.43
SCAMP4-210ENST00000588555 KANSL2Q9H9L4 492 aa30.24■■■□□ 2.43
SCAMP4-210ENST00000588555 CNTNAP5Q8WYK1 1306 aa30.24■■■□□ 2.43
SCAMP4-210ENST00000588555 SEPT2Q15019 361 aa30.23■■■□□ 2.43
SCAMP4-210ENST00000588555 MIGA2Q7L4E1 593 aa30.23■■■□□ 2.43
SCAMP4-210ENST00000588555 RASGRP2Q7LDG7 609 aa30.23■■■□□ 2.43
SCAMP4-210ENST00000588555 APOBEC3FQ8IUX4 373 aaKnown RBP30.23■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms