RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 PCCAP05165 728 aaPredicted RBP9□□□□□ -0.97
TPM4-210ENST00000588507 KIAA0319Q5VV43 1072 aa9□□□□□ -0.97
TPM4-210ENST00000588507 TEKT1Q969V4 418 aa9□□□□□ -0.97
TPM4-210ENST00000588507 PPP1R12CQ9BZL4 782 aa9□□□□□ -0.97
TPM4-210ENST00000588507 PORCNQ9H237 461 aa9□□□□□ -0.97
TPM4-210ENST00000588507 TXNRD2Q9NNW7 524 aa9□□□□□ -0.97
TPM4-210ENST00000588507 IRX3P78415 501 aaPredicted RBP8.99□□□□□ -0.97
TPM4-210ENST00000588507 DMWDQ09019 674 aa8.99□□□□□ -0.97
TPM4-210ENST00000588507 Q3C1V9 767 aa8.99□□□□□ -0.97
TPM4-210ENST00000588507 RNF180Q86T96 592 aa8.99□□□□□ -0.97
TPM4-210ENST00000588507 LURAP1LQ8IV03 231 aa8.99□□□□□ -0.97
TPM4-210ENST00000588507 JARID2Q92833 1246 aaPredicted RBP8.99□□□□□ -0.97
TPM4-210ENST00000588507 RSPH6AQ9H0K4 717 aa8.99□□□□□ -0.97
TPM4-210ENST00000588507 GREM2Q9H772 168 aa8.99□□□□□ -0.97
TPM4-210ENST00000588507 GCN1Q92616 2671 aaKnown RBP8.98□□□□□ -0.97
TPM4-210ENST00000588507 DMXL1Q9Y485 3027 aa8.98□□□□□ -0.97
TPM4-210ENST00000588507 SLC15A5A6NIM6 579 aa8.98□□□□□ -0.97
TPM4-210ENST00000588507 SNAP23O00161 211 aa8.98□□□□□ -0.97
TPM4-210ENST00000588507 HOXC6P09630 235 aa8.98□□□□□ -0.97
TPM4-210ENST00000588507 CTSWP56202 376 aa8.98□□□□□ -0.97
TPM4-210ENST00000588507 ERVK-9P63128 1117 aa8.98□□□□□ -0.97
TPM4-210ENST00000588507 ERVK-24P63145 666 aa8.98□□□□□ -0.97
TPM4-210ENST00000588507 CHRNDQ07001 517 aa8.98□□□□□ -0.97
TPM4-210ENST00000588507 SIGLEC14Q08ET2 396 aa8.98□□□□□ -0.97
TPM4-210ENST00000588507 TCP10Q12799 353 aa8.98□□□□□ -0.97
TPM4-210ENST00000588507 RSPO4Q2I0M5 234 aaPredicted RBP8.98□□□□□ -0.97
TPM4-210ENST00000588507 FAM47AQ5JRC9 791 aa8.98□□□□□ -0.97
TPM4-210ENST00000588507 TTLL11Q8NHH1 800 aa8.98□□□□□ -0.97
TPM4-210ENST00000588507 ZDHHC15Q96MV8 337 aa8.98□□□□□ -0.97
TPM4-210ENST00000588507 STARD7Q9NQZ5 370 aa8.98□□□□□ -0.97
TPM4-210ENST00000588507 RBPJLQ9UBG7 517 aa8.98□□□□□ -0.97
TPM4-210ENST00000588507 LRRFIP2Q9Y608 721 aaKnown RBP8.98□□□□□ -0.97
TPM4-210ENST00000588507 MROH7Q68CQ1 1323 aa8.98□□□□□ -0.97
TPM4-210ENST00000588507 SPEF2Q9C093 1822 aa8.98□□□□□ -0.97
TPM4-210ENST00000588507 CTNND1O60716 968 aaKnown RBP8.97□□□□□ -0.97
TPM4-210ENST00000588507 ARHGEF15O94989 841 aa8.97□□□□□ -0.97
TPM4-210ENST00000588507 IGHA2P01877 340 aa8.97□□□□□ -0.97
TPM4-210ENST00000588507 CYP2C18P33260 490 aa8.97□□□□□ -0.97
TPM4-210ENST00000588507 HMGCS2P54868 508 aa8.97□□□□□ -0.97
TPM4-210ENST00000588507 HERVK_113P62684 666 aa8.97□□□□□ -0.97
TPM4-210ENST00000588507 SPP2Q13103 211 aa8.97□□□□□ -0.97
TPM4-210ENST00000588507 COL9A3Q14050 684 aaPredicted RBP8.97□□□□□ -0.97
TPM4-210ENST00000588507 APOBEC3HQ6NTF7 200 aaKnown RBP8.97□□□□□ -0.97
TPM4-210ENST00000588507 CCDC84Q86UT8 332 aaPredicted RBP8.97□□□□□ -0.97
TPM4-210ENST00000588507 RPUSD2Q8IZ73 545 aaKnown RBP8.97□□□□□ -0.97
TPM4-210ENST00000588507 NPLOC4Q8TAT6 608 aa8.97□□□□□ -0.97
TPM4-210ENST00000588507 GDPD5Q8WTR4 605 aa8.97□□□□□ -0.97
TPM4-210ENST00000588507 NUP133Q8WUM0 1156 aa8.97□□□□□ -0.97
TPM4-210ENST00000588507 MPHOSPH8Q99549 860 aa8.97□□□□□ -0.97
TPM4-210ENST00000588507 MRIQ9BWK5 157 aa8.97□□□□□ -0.97
TPM4-210ENST00000588507 XPNPEP3Q9NQH7 507 aa8.97□□□□□ -0.97
TPM4-210ENST00000588507 KNSTRNQ9Y448 316 aa8.97□□□□□ -0.97
TPM4-210ENST00000588507 KIF28PB7ZC32 967 aa8.96□□□□□ -0.98
TPM4-210ENST00000588507 ADRB1P08588 477 aa8.96□□□□□ -0.98
TPM4-210ENST00000588507 PTPREP23469 700 aa8.96□□□□□ -0.98
TPM4-210ENST00000588507 CCDC191Q8NCU4 936 aa8.96□□□□□ -0.98
TPM4-210ENST00000588507 KCNG4Q8TDN1 519 aa8.96□□□□□ -0.98
TPM4-210ENST00000588507 NDUFB9Q9Y6M9 179 aa8.96□□□□□ -0.98
TPM4-210ENST00000588507 PHIPQ8WWQ0 1821 aa8.96□□□□□ -0.98
TPM4-210ENST00000588507 TLR3O15455 904 aaKnown RBP8.95□□□□□ -0.98
TPM4-210ENST00000588507 TAF5LO75529 589 aa8.95□□□□□ -0.98
TPM4-210ENST00000588507 RARBP10826 455 aa8.95□□□□□ -0.98
TPM4-210ENST00000588507 SDHBP21912 280 aa8.95□□□□□ -0.98
TPM4-210ENST00000588507 SMAD2Q15796 467 aaKnown RBP8.95□□□□□ -0.98
TPM4-210ENST00000588507 GRIK5Q16478 980 aa8.95□□□□□ -0.98
TPM4-210ENST00000588507 WDR78Q5VTH9 848 aa8.95□□□□□ -0.98
TPM4-210ENST00000588507 OLFML2BQ68BL8 750 aa8.95□□□□□ -0.98
TPM4-210ENST00000588507 ZNF280CQ8ND82 737 aa8.95□□□□□ -0.98
TPM4-210ENST00000588507 GTF3C2Q8WUA4 911 aaPredicted RBP8.95□□□□□ -0.98
TPM4-210ENST00000588507 ASIC4Q96FT7 647 aa8.95□□□□□ -0.98
TPM4-210ENST00000588507 TSEN34Q9BSV6 310 aaKnown RBP8.95□□□□□ -0.98
TPM4-210ENST00000588507 PAGR1Q9BTK6 254 aa8.95□□□□□ -0.98
TPM4-210ENST00000588507 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.95□□□□□ -0.98
TPM4-210ENST00000588507 WDR87Q6ZQQ6 2873 aa8.94□□□□□ -0.98
TPM4-210ENST00000588507 PGK1P00558 417 aa8.94□□□□□ -0.98
TPM4-210ENST00000588507 HOXA7P31268 230 aaPredicted RBP8.94□□□□□ -0.98
TPM4-210ENST00000588507 CDK7P50613 346 aa8.94□□□□□ -0.98
TPM4-210ENST00000588507 ACLYP53396 1101 aa8.94□□□□□ -0.98
TPM4-210ENST00000588507 SH3D19Q5HYK7 790 aa8.94□□□□□ -0.98
TPM4-210ENST00000588507 EP400NLQ6ZTU2 488 aa8.94□□□□□ -0.98
TPM4-210ENST00000588507 PHOSPHO2Q8TCD6 241 aa8.94□□□□□ -0.98
TPM4-210ENST00000588507 IVNS1ABPQ9Y6Y0 642 aa8.94□□□□□ -0.98
TPM4-210ENST00000588507 COL4A4P53420 1690 aaPredicted RBP8.94□□□□□ -0.98
TPM4-210ENST00000588507 LOC285556D6RIA3 1793 aa8.94□□□□□ -0.98
TPM4-210ENST00000588507 A0A1B0GUL7 405 aa8.93□□□□□ -0.98
TPM4-210ENST00000588507 STXBP3O00186 592 aa8.93□□□□□ -0.98
TPM4-210ENST00000588507 LMNAP02545 664 aaKnown RBP8.93□□□□□ -0.98
TPM4-210ENST00000588507 ATXN1P54253 815 aaKnown RBP8.93□□□□□ -0.98
TPM4-210ENST00000588507 CCNA1P78396 465 aa8.93□□□□□ -0.98
TPM4-210ENST00000588507 GRB14Q14449 540 aa8.93□□□□□ -0.98
TPM4-210ENST00000588507 PRAMEF19Q5SWL8 479 aa8.93□□□□□ -0.98
TPM4-210ENST00000588507 SPRED2Q7Z698 418 aa8.93□□□□□ -0.98
TPM4-210ENST00000588507 PABPC5Q96DU9 382 aaKnown RBP8.93□□□□□ -0.98
TPM4-210ENST00000588507 SLC9A7Q96T83 725 aa8.93□□□□□ -0.98
TPM4-210ENST00000588507 TBC1D2Q9BYX2 928 aa8.93□□□□□ -0.98
TPM4-210ENST00000588507 SEMA4AQ9H3S1 761 aa8.93□□□□□ -0.98
TPM4-210ENST00000588507 SUGCTQ9HAC7 445 aa8.93□□□□□ -0.98
TPM4-210ENST00000588507 CWC25Q9NXE8 425 aaPredicted RBP8.93□□□□□ -0.98
TPM4-210ENST00000588507 CHPF2Q9P2E5 772 aa8.93□□□□□ -0.98
TPM4-210ENST00000588507 TSPYL4Q9UJ04 414 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms