RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 EPB41L4AQ9HCS5 686 aaPredicted RBP12.59□□□□□ -0.39
TPM4-209ENST00000588483 EMILIN3Q9NT22 766 aa12.59□□□□□ -0.39
TPM4-209ENST00000588483 TMOD4Q9NZQ9 345 aa12.59□□□□□ -0.39
TPM4-209ENST00000588483 MKI67P46013 3256 aaKnown RBP12.59□□□□□ -0.39
TPM4-209ENST00000588483 PATL2C9JE40 543 aaKnown RBP12.58□□□□□ -0.4
TPM4-209ENST00000588483 OSBPP22059 807 aa12.58□□□□□ -0.4
TPM4-209ENST00000588483 PSMC4P43686 418 aa12.58□□□□□ -0.4
TPM4-209ENST00000588483 CDK8P49336 464 aa12.58□□□□□ -0.4
TPM4-209ENST00000588483 RAB3GAP1Q15042 981 aa12.58□□□□□ -0.4
TPM4-209ENST00000588483 PLEKHM2Q8IWE5 1019 aa12.58□□□□□ -0.4
TPM4-209ENST00000588483 SLC44A5Q8NCS7 719 aa12.58□□□□□ -0.4
TPM4-209ENST00000588483 GTF3C2Q8WUA4 911 aaPredicted RBP12.58□□□□□ -0.4
TPM4-209ENST00000588483 DYNLL2Q96FJ2 89 aa12.58□□□□□ -0.4
TPM4-209ENST00000588483 MORF4L1Q9UBU8 362 aa12.58□□□□□ -0.4
TPM4-209ENST00000588483 SRRDQ9UH36 339 aa12.58□□□□□ -0.4
TPM4-209ENST00000588483 KIAA0100Q14667 2235 aaKnown RBP12.58□□□□□ -0.4
TPM4-209ENST00000588483 TNRC18O15417 2968 aaPredicted RBP12.57□□□□□ -0.4
TPM4-209ENST00000588483 CYP2D7A0A087X1C5 515 aa12.57□□□□□ -0.4
TPM4-209ENST00000588483 SMIM22K7EJ46 135 aa12.57□□□□□ -0.4
TPM4-209ENST00000588483 FCGRTP55899 365 aa12.57□□□□□ -0.4
TPM4-209ENST00000588483 SEPT2Q15019 361 aa12.57□□□□□ -0.4
TPM4-209ENST00000588483 LBX2Q6XYB7 198 aa12.57□□□□□ -0.4
TPM4-209ENST00000588483 ACER1Q8TDN7 264 aa12.57□□□□□ -0.4
TPM4-209ENST00000588483 SEC62Q99442 399 aaKnown RBP12.57□□□□□ -0.4
TPM4-209ENST00000588483 PTCH2Q9Y6C5 1203 aa12.57□□□□□ -0.4
TPM4-209ENST00000588483 DOCK3Q8IZD9 2030 aa12.57□□□□□ -0.4
TPM4-209ENST00000588483 A0A1W2PRG0 241 aa12.56□□□□□ -0.4
TPM4-209ENST00000588483 FOXP2O15409 715 aa12.56□□□□□ -0.4
TPM4-209ENST00000588483 AKR1B1P15121 316 aa12.56□□□□□ -0.4
TPM4-209ENST00000588483 HOXD10P28358 340 aa12.56□□□□□ -0.4
TPM4-209ENST00000588483 IRX3P78415 501 aaPredicted RBP12.56□□□□□ -0.4
TPM4-209ENST00000588483 IFNL3Q8IZI9 196 aa12.56□□□□□ -0.4
TPM4-209ENST00000588483 ANKRD13CQ8N6S4 541 aa12.56□□□□□ -0.4
TPM4-209ENST00000588483 ZNF333Q96JL9 665 aa12.56□□□□□ -0.4
TPM4-209ENST00000588483 HELLSQ9NRZ9 838 aa12.56□□□□□ -0.4
TPM4-209ENST00000588483 RLFQ13129 1914 aa12.55□□□□□ -0.4
TPM4-209ENST00000588483 USP17L15C9J2P7 530 aa12.55□□□□□ -0.4
TPM4-209ENST00000588483 USP17L13C9JLJ4 530 aa12.55□□□□□ -0.4
TPM4-209ENST00000588483 USP17L11C9JVI0 530 aa12.55□□□□□ -0.4
TPM4-209ENST00000588483 USP17L18D6R9N7 530 aa12.55□□□□□ -0.4
TPM4-209ENST00000588483 USP17L22D6RA61 530 aa12.55□□□□□ -0.4
TPM4-209ENST00000588483 USP17L17D6RBQ6 530 aa12.55□□□□□ -0.4
TPM4-209ENST00000588483 USP17L19D6RCP7 530 aa12.55□□□□□ -0.4
TPM4-209ENST00000588483 USP17L20D6RJB6 530 aa12.55□□□□□ -0.4
TPM4-209ENST00000588483 VCAM1P19320 739 aa12.55□□□□□ -0.4
TPM4-209ENST00000588483 HERVK_113P62684 666 aa12.55□□□□□ -0.4
TPM4-209ENST00000588483 USP17L24Q0WX57 530 aa12.55□□□□□ -0.4
TPM4-209ENST00000588483 B4GALNT3Q6L9W6 998 aa12.55□□□□□ -0.4
TPM4-209ENST00000588483 CATSPERGQ6ZRH7 1159 aa12.55□□□□□ -0.4
TPM4-209ENST00000588483 SIAH1Q8IUQ4 282 aa12.55□□□□□ -0.4
TPM4-209ENST00000588483 LPAR1Q92633 364 aa12.55□□□□□ -0.4
TPM4-209ENST00000588483 P2RX7Q99572 595 aaKnown RBP12.55□□□□□ -0.4
TPM4-209ENST00000588483 FEZ1Q99689 392 aa12.55□□□□□ -0.4
TPM4-209ENST00000588483 NACAP1Q9BZK3 213 aa12.55□□□□□ -0.4
TPM4-209ENST00000588483 TMX2Q9Y320 296 aa12.55□□□□□ -0.4
TPM4-209ENST00000588483 PLIN4Q96Q06 1357 aa12.55□□□□□ -0.4
TPM4-209ENST00000588483 A0A0G2JMZ2 1700 aa12.54□□□□□ -0.4
TPM4-209ENST00000588483 PARP14Q460N5 1801 aa12.54□□□□□ -0.4
TPM4-209ENST00000588483 MPHOSPH10O00566 681 aaKnown RBP12.54□□□□□ -0.4
TPM4-209ENST00000588483 FMNL1O95466 1100 aaPredicted RBP12.54□□□□□ -0.4
TPM4-209ENST00000588483 RASA1P20936 1047 aa12.54□□□□□ -0.4
TPM4-209ENST00000588483 TDO2P48775 406 aa12.54□□□□□ -0.4
TPM4-209ENST00000588483 ICA1Q05084 483 aa12.54□□□□□ -0.4
TPM4-209ENST00000588483 IRF5Q13568 498 aa12.54□□□□□ -0.4
TPM4-209ENST00000588483 ALX1Q15699 326 aa12.54□□□□□ -0.4
TPM4-209ENST00000588483 SLC9C1Q4G0N8 1177 aa12.54□□□□□ -0.4
TPM4-209ENST00000588483 POTEEQ6S8J3 1075 aa12.54□□□□□ -0.4
TPM4-209ENST00000588483 NBPF11Q86T75 865 aa12.54□□□□□ -0.4
TPM4-209ENST00000588483 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.54□□□□□ -0.4
TPM4-209ENST00000588483 SH2D4AQ9H788 454 aa12.54□□□□□ -0.4
TPM4-209ENST00000588483 KANSL2Q9H9L4 492 aa12.54□□□□□ -0.4
TPM4-209ENST00000588483 ZNF287Q9HBT7 754 aa12.54□□□□□ -0.4
TPM4-209ENST00000588483 ZMYM6O95789 1325 aa12.54□□□□□ -0.4
TPM4-209ENST00000588483 MYPNQ86TC9 1320 aa12.54□□□□□ -0.4
TPM4-209ENST00000588483 IGKV6D-41A0A0C4DH26 115 aa12.53□□□□□ -0.4
TPM4-209ENST00000588483 TNPO2O14787 897 aaKnown RBP12.53□□□□□ -0.4
TPM4-209ENST00000588483 PRKCZQ05513 592 aa12.53□□□□□ -0.4
TPM4-209ENST00000588483 MCMDC2Q4G0Z9 681 aa12.53□□□□□ -0.4
TPM4-209ENST00000588483 VCPKMTQ9H867 229 aa12.53□□□□□ -0.4
TPM4-209ENST00000588483 ARHGEF10LQ9HCE6 1279 aa12.53□□□□□ -0.4
TPM4-209ENST00000588483 TXNRD2Q9NNW7 524 aa12.53□□□□□ -0.4
TPM4-209ENST00000588483 RBPJLQ9UBG7 517 aa12.53□□□□□ -0.4
TPM4-209ENST00000588483 ANAPC4Q9UJX5 808 aa12.53□□□□□ -0.4
TPM4-209ENST00000588483 SYNPO2Q9UMS6 1093 aa12.53□□□□□ -0.4
TPM4-209ENST00000588483 PLXNB2O15031 1838 aa12.53□□□□□ -0.4
TPM4-209ENST00000588483 A0A0D9SFI3 127 aa12.52□□□□□ -0.41
TPM4-209ENST00000588483 APPP05067 770 aa12.52□□□□□ -0.41
TPM4-209ENST00000588483 SOX10P56693 466 aa12.52□□□□□ -0.41
TPM4-209ENST00000588483 ERVK-9P63128 1117 aa12.52□□□□□ -0.41
TPM4-209ENST00000588483 ERVK-24P63145 666 aa12.52□□□□□ -0.41
TPM4-209ENST00000588483 ZYXQ15942 572 aaKnown RBP12.52□□□□□ -0.41
TPM4-209ENST00000588483 SLAIN1Q8ND83 568 aa12.52□□□□□ -0.41
TPM4-209ENST00000588483 GPRC5AQ8NFJ5 357 aa12.52□□□□□ -0.41
TPM4-209ENST00000588483 PXYLP1Q8TE99 480 aa12.52□□□□□ -0.41
TPM4-209ENST00000588483 FAM227BQ96M60 508 aa12.52□□□□□ -0.41
TPM4-209ENST00000588483 NAPBQ9H115 298 aa12.52□□□□□ -0.41
TPM4-209ENST00000588483 RPAP3Q9H6T3 665 aaPredicted RBP12.52□□□□□ -0.41
TPM4-209ENST00000588483 RABGAP1Q9Y3P9 1069 aa12.52□□□□□ -0.41
TPM4-209ENST00000588483 SPDYE16A6NNV3 312 aaPredicted RBP12.51□□□□□ -0.41
TPM4-209ENST00000588483 MINDY4BA8MYZ0 360 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms