RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 EXOC6Q8TAG9 804 aa23.45■■□□□ 1.34
TPM4-208ENST00000588410 GTF3C2Q8WUA4 911 aaPredicted RBP23.45■■□□□ 1.34
TPM4-208ENST00000588410 C12orf42Q96LP6 360 aa23.45■■□□□ 1.34
TPM4-208ENST00000588410 CCDC17Q96LX7 622 aa23.45■■□□□ 1.34
TPM4-208ENST00000588410 CDK5RAP2Q96SN8 1893 aa23.45■■□□□ 1.34
TPM4-208ENST00000588410 USP17L15C9J2P7 530 aa23.44■■□□□ 1.34
TPM4-208ENST00000588410 USP17L13C9JLJ4 530 aa23.44■■□□□ 1.34
TPM4-208ENST00000588410 USP17L11C9JVI0 530 aa23.44■■□□□ 1.34
TPM4-208ENST00000588410 USP17L18D6R9N7 530 aa23.44■■□□□ 1.34
TPM4-208ENST00000588410 USP17L22D6RA61 530 aa23.44■■□□□ 1.34
TPM4-208ENST00000588410 USP17L17D6RBQ6 530 aa23.44■■□□□ 1.34
TPM4-208ENST00000588410 USP17L19D6RCP7 530 aa23.44■■□□□ 1.34
TPM4-208ENST00000588410 USP17L20D6RJB6 530 aa23.44■■□□□ 1.34
TPM4-208ENST00000588410 GPAA1O43292 621 aa23.44■■□□□ 1.34
TPM4-208ENST00000588410 FLT3LGP49771 235 aa23.44■■□□□ 1.34
TPM4-208ENST00000588410 USP17L24Q0WX57 530 aa23.44■■□□□ 1.34
TPM4-208ENST00000588410 GIMAP6Q6P9H5 292 aa23.44■■□□□ 1.34
TPM4-208ENST00000588410 C16orf86Q6ZW13 317 aa23.44■■□□□ 1.34
TPM4-208ENST00000588410 MORF4L1Q9UBU8 362 aa23.44■■□□□ 1.34
TPM4-208ENST00000588410 GABRQQ9UN88 632 aa23.44■■□□□ 1.34
TPM4-208ENST00000588410 APPP05067 770 aa23.43■■□□□ 1.34
TPM4-208ENST00000588410 SLAIN1Q8ND83 568 aa23.43■■□□□ 1.34
TPM4-208ENST00000588410 GPRC5AQ8NFJ5 357 aa23.43■■□□□ 1.34
TPM4-208ENST00000588410 SUPT16HQ9Y5B9 1047 aaKnown RBP23.43■■□□□ 1.34
TPM4-208ENST00000588410 MYH1P12882 1939 aa23.42■■□□□ 1.34
TPM4-208ENST00000588410 GSG1L2A8MUP6 293 aa23.42■■□□□ 1.34
TPM4-208ENST00000588410 M0R2C6 588 aa23.42■■□□□ 1.34
TPM4-208ENST00000588410 AKR1B1P15121 316 aa23.42■■□□□ 1.34
TPM4-208ENST00000588410 TDO2P48775 406 aa23.42■■□□□ 1.34
TPM4-208ENST00000588410 UBXN2AP68543 259 aa23.42■■□□□ 1.34
TPM4-208ENST00000588410 CCAR1Q8IX12 1150 aaKnown RBP23.42■■□□□ 1.34
TPM4-208ENST00000588410 SALL3Q9BXA9 1300 aa23.41■■□□□ 1.34
TPM4-208ENST00000588410 ATAD5Q96QE3 1844 aa23.41■■□□□ 1.34
TPM4-208ENST00000588410 ADCY3O60266 1144 aa23.41■■□□□ 1.34
TPM4-208ENST00000588410 VCAM1P19320 739 aa23.41■■□□□ 1.34
TPM4-208ENST00000588410 SBK1Q52WX2 424 aa23.41■■□□□ 1.34
TPM4-208ENST00000588410 PAGR1Q9BTK6 254 aa23.41■■□□□ 1.34
TPM4-208ENST00000588410 SH2D4AQ9H788 454 aa23.41■■□□□ 1.34
TPM4-208ENST00000588410 ARHGEF10LQ9HCE6 1279 aa23.41■■□□□ 1.34
TPM4-208ENST00000588410 STAP2Q9UGK3 403 aa23.41■■□□□ 1.34
TPM4-208ENST00000588410 DDX60LQ5H9U9 1706 aaKnown RBP23.41■■□□□ 1.34
TPM4-208ENST00000588410 NAV1Q8NEY1 1877 aa23.41■■□□□ 1.34
TPM4-208ENST00000588410 LOC285556D6RIA3 1793 aa23.4■■□□□ 1.34
TPM4-208ENST00000588410 MINDY4BA8MYZ0 360 aa23.4■■□□□ 1.34
TPM4-208ENST00000588410 SMIM22K7EJ46 135 aa23.4■■□□□ 1.34
TPM4-208ENST00000588410 EN2P19622 333 aaPredicted RBP23.4■■□□□ 1.34
TPM4-208ENST00000588410 PDE1AP54750 535 aa23.4■■□□□ 1.34
TPM4-208ENST00000588410 ICA1Q05084 483 aa23.4■■□□□ 1.34
TPM4-208ENST00000588410 IRF5Q13568 498 aa23.4■■□□□ 1.34
TPM4-208ENST00000588410 B4GALNT3Q6L9W6 998 aa23.4■■□□□ 1.34
TPM4-208ENST00000588410 CATSPERGQ6ZRH7 1159 aa23.4■■□□□ 1.34
TPM4-208ENST00000588410 EVI5LQ96CN4 794 aa23.4■■□□□ 1.34
TPM4-208ENST00000588410 NACAP1Q9BZK3 213 aa23.4■■□□□ 1.34
TPM4-208ENST00000588410 LNPKQ9C0E8 428 aa23.4■■□□□ 1.34
TPM4-208ENST00000588410 RPAP3Q9H6T3 665 aaPredicted RBP23.4■■□□□ 1.34
TPM4-208ENST00000588410 PATL2C9JE40 543 aaKnown RBP23.39■■□□□ 1.33
TPM4-208ENST00000588410 MKNK2Q9HBH9 465 aa23.39■■□□□ 1.33
TPM4-208ENST00000588410 TXNRD2Q9NNW7 524 aa23.39■■□□□ 1.33
TPM4-208ENST00000588410 RBPJLQ9UBG7 517 aa23.39■■□□□ 1.33
TPM4-208ENST00000588410 PTPRFP10586 1907 aa23.39■■□□□ 1.33
TPM4-208ENST00000588410 ZSWIM8A7E2V4 1837 aa23.38■■□□□ 1.33
TPM4-208ENST00000588410 A0A1W2PRG0 241 aa23.38■■□□□ 1.33
TPM4-208ENST00000588410 ZMYM1Q5SVZ6 1142 aa23.38■■□□□ 1.33
TPM4-208ENST00000588410 SMC5Q8IY18 1101 aa23.38■■□□□ 1.33
TPM4-208ENST00000588410 STK11IPQ8N1F8 1099 aa23.38■■□□□ 1.33
TPM4-208ENST00000588410 PXYLP1Q8TE99 480 aa23.38■■□□□ 1.33
TPM4-208ENST00000588410 SEC62Q99442 399 aaKnown RBP23.38■■□□□ 1.33
TPM4-208ENST00000588410 CWC22Q9HCG8 908 aaKnown RBP23.38■■□□□ 1.33
TPM4-208ENST00000588410 PEX10O60683 326 aa23.37■■□□□ 1.33
TPM4-208ENST00000588410 ELNP15502 786 aa23.37■■□□□ 1.33
TPM4-208ENST00000588410 MAPK4P31152 587 aa23.37■■□□□ 1.33
TPM4-208ENST00000588410 ERVK-9P63128 1117 aa23.37■■□□□ 1.33
TPM4-208ENST00000588410 ERVK-24P63145 666 aa23.37■■□□□ 1.33
TPM4-208ENST00000588410 ATP2B2Q01814 1243 aa23.37■■□□□ 1.33
TPM4-208ENST00000588410 MTFR1Q15390 333 aa23.37■■□□□ 1.33
TPM4-208ENST00000588410 KANSL2Q9H9L4 492 aa23.37■■□□□ 1.33
TPM4-208ENST00000588410 ZNF287Q9HBT7 754 aa23.37■■□□□ 1.33
TPM4-208ENST00000588410 RABGAP1Q9Y3P9 1069 aa23.37■■□□□ 1.33
TPM4-208ENST00000588410 IGHDP01880 384 aa23.36■■□□□ 1.33
TPM4-208ENST00000588410 CCL5P13501 91 aa23.36■■□□□ 1.33
TPM4-208ENST00000588410 CCNA1P78396 465 aa23.36■■□□□ 1.33
TPM4-208ENST00000588410 CLEC10AQ8IUN9 316 aa23.36■■□□□ 1.33
TPM4-208ENST00000588410 IFNL3Q8IZI9 196 aa23.36■■□□□ 1.33
TPM4-208ENST00000588410 LPAR1Q92633 364 aa23.36■■□□□ 1.33
TPM4-208ENST00000588410 TANGO6Q9C0B7 1094 aa23.36■■□□□ 1.33
TPM4-208ENST00000588410 RNF208Q9H0X6 261 aa23.36■■□□□ 1.33
TPM4-208ENST00000588410 EPB41L4AQ9HCS5 686 aaPredicted RBP23.36■■□□□ 1.33
TPM4-208ENST00000588410 TMX2Q9Y320 296 aa23.36■■□□□ 1.33
TPM4-208ENST00000588410 Q3C1V9 767 aa23.35■■□□□ 1.33
TPM4-208ENST00000588410 CHD1LQ86WJ1 897 aa23.35■■□□□ 1.33
TPM4-208ENST00000588410 NKX2-3Q8TAU0 364 aa23.35■■□□□ 1.33
TPM4-208ENST00000588410 NAPBQ9H115 298 aa23.35■■□□□ 1.33
TPM4-208ENST00000588410 HTTP42858 3142 aa23.35■■□□□ 1.33
TPM4-208ENST00000588410 INHAP05111 366 aa23.34■■□□□ 1.33
TPM4-208ENST00000588410 EEF2P13639 858 aaKnown RBP23.34■■□□□ 1.33
TPM4-208ENST00000588410 SIAH1Q8IUQ4 282 aa23.34■■□□□ 1.33
TPM4-208ENST00000588410 VCPKMTQ9H867 229 aa23.34■■□□□ 1.33
TPM4-208ENST00000588410 HOXC10Q9NYD6 342 aa23.34■■□□□ 1.33
TPM4-208ENST00000588410 TRIM6-TRIM34B2RNG4 842 aa23.33■■□□□ 1.33
TPM4-208ENST00000588410 SLC3A2P08195 630 aaKnown RBP23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms