RNA–Protein interactions for RNA: ENST00000588228.5

NFIX-210, Transcript of nuclear factor I X, humanhuman

TSL 2 BASIC

Gene NFIX, Length 1,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-210ENST00000588228 MYH1P12882 1939 aa19.16■□□□□ 0.66
NFIX-210ENST00000588228 UBE2Q2LH0YL09 131 aa19.16■□□□□ 0.66
NFIX-210ENST00000588228 NOVP48745 357 aa19.16■□□□□ 0.66
NFIX-210ENST00000588228 USP28Q96RU2 1077 aa19.16■□□□□ 0.66
NFIX-210ENST00000588228 TAOK2Q9UL54 1235 aa19.16■□□□□ 0.66
NFIX-210ENST00000588228 TCHHQ07283 1943 aa19.16■□□□□ 0.66
NFIX-210ENST00000588228 COL4A5P29400 1685 aa19.16■□□□□ 0.66
NFIX-210ENST00000588228 KIF28PB7ZC32 967 aa19.15■□□□□ 0.66
NFIX-210ENST00000588228 PSMD14O00487 310 aa19.15■□□□□ 0.66
NFIX-210ENST00000588228 RAD17O75943 681 aa19.15■□□□□ 0.66
NFIX-210ENST00000588228 CFAP100Q494V2 611 aa19.15■□□□□ 0.66
NFIX-210ENST00000588228 L1TD1Q5T7N2 865 aaKnown RBP19.15■□□□□ 0.66
NFIX-210ENST00000588228 MYSM1Q5VVJ2 828 aa19.15■□□□□ 0.66
NFIX-210ENST00000588228 GMLQ99445 158 aa19.15■□□□□ 0.66
NFIX-210ENST00000588228 TMEM47Q9BQJ4 181 aa19.15■□□□□ 0.66
NFIX-210ENST00000588228 STX8Q9UNK0 236 aa19.15■□□□□ 0.66
NFIX-210ENST00000588228 MMP1P03956 469 aa19.14■□□□□ 0.66
NFIX-210ENST00000588228 U2AF2P26368 475 aaKnown RBP eCLIP19.14■□□□□ 0.66
NFIX-210ENST00000588228 GNAQP50148 359 aa19.14■□□□□ 0.66
NFIX-210ENST00000588228 GRM4Q14833 912 aa19.14■□□□□ 0.66
NFIX-210ENST00000588228 TAOK3Q9H2K8 898 aa19.14■□□□□ 0.66
NFIX-210ENST00000588228 RTEL1Q9NZ71 1219 aa19.14■□□□□ 0.66
NFIX-210ENST00000588228 PPP1R1BQ9UD71 204 aaPredicted RBP19.14■□□□□ 0.66
NFIX-210ENST00000588228 FAM198AQ9UFP1 575 aa19.14■□□□□ 0.66
NFIX-210ENST00000588228 HDAC9Q9UKV0 1011 aa19.14■□□□□ 0.66
NFIX-210ENST00000588228 CNTNAP5Q8WYK1 1306 aa19.14■□□□□ 0.65
NFIX-210ENST00000588228 PSME4Q14997 1843 aa19.14■□□□□ 0.65
NFIX-210ENST00000588228 GOLGA6L4A6NEF3 574 aa19.14■□□□□ 0.65
NFIX-210ENST00000588228 XBP1P17861 261 aa19.14■□□□□ 0.65
NFIX-210ENST00000588228 GNL2Q13823 731 aaKnown RBP19.14■□□□□ 0.65
NFIX-210ENST00000588228 SAFBQ15424 915 aaKnown RBP eCLIP19.14■□□□□ 0.65
NFIX-210ENST00000588228 SRBD1Q8N5C6 995 aaKnown RBP19.14■□□□□ 0.65
NFIX-210ENST00000588228 PTGER2P43116 358 aa19.13■□□□□ 0.65
NFIX-210ENST00000588228 PKN1Q16512 942 aa19.13■□□□□ 0.65
NFIX-210ENST00000588228 CCDC183Q5T5S1 534 aa19.13■□□□□ 0.65
NFIX-210ENST00000588228 ZFPM1Q8IX07 1006 aa19.13■□□□□ 0.65
NFIX-210ENST00000588228 CEP95Q96GE4 821 aa19.13■□□□□ 0.65
NFIX-210ENST00000588228 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.13■□□□□ 0.65
NFIX-210ENST00000588228 FTOQ9C0B1 505 aaKnown RBP eCLIP19.13■□□□□ 0.65
NFIX-210ENST00000588228 POLR3EQ9NVU0 708 aa19.13■□□□□ 0.65
NFIX-210ENST00000588228 V9GY48 417 aaPredicted RBP19.13■□□□□ 0.65
NFIX-210ENST00000588228 ECM29Q5VYK3 1845 aa19.13■□□□□ 0.65
NFIX-210ENST00000588228 ENTPD3O75355 529 aa19.12■□□□□ 0.65
NFIX-210ENST00000588228 TOP1P11387 765 aaKnown RBP19.12■□□□□ 0.65
NFIX-210ENST00000588228 SHMT1P34896 483 aa19.12■□□□□ 0.65
NFIX-210ENST00000588228 CACNB3P54284 484 aa19.12■□□□□ 0.65
NFIX-210ENST00000588228 CEBPZQ03701 1054 aaKnown RBP19.12■□□□□ 0.65
NFIX-210ENST00000588228 AGBL3Q8NEM8 1001 aa19.12■□□□□ 0.65
NFIX-210ENST00000588228 PGBD1Q96JS3 809 aa19.12■□□□□ 0.65
NFIX-210ENST00000588228 TDRD3Q9H7E2 651 aaKnown RBP19.12■□□□□ 0.65
NFIX-210ENST00000588228 IGKV6D-41A0A0C4DH26 115 aa19.11■□□□□ 0.65
NFIX-210ENST00000588228 YEATS4O95619 227 aa19.11■□□□□ 0.65
NFIX-210ENST00000588228 TCP10Q12799 353 aa19.11■□□□□ 0.65
NFIX-210ENST00000588228 GAS2L3Q86XJ1 694 aa19.11■□□□□ 0.65
NFIX-210ENST00000588228 OGFOD1Q8N543 542 aa19.11■□□□□ 0.65
NFIX-210ENST00000588228 PRMT6Q96LA8 375 aaPredicted RBP19.11■□□□□ 0.65
NFIX-210ENST00000588228 FOXP1Q9H334 677 aaPredicted RBP19.11■□□□□ 0.65
NFIX-210ENST00000588228 PI4KBQ9UBF8 816 aa19.11■□□□□ 0.65
NFIX-210ENST00000588228 MYH15Q9Y2K3 1946 aa19.11■□□□□ 0.65
NFIX-210ENST00000588228 COL2A1P02458 1487 aaPredicted RBP19.11■□□□□ 0.65
NFIX-210ENST00000588228 PSDA5PKW4 1024 aaPredicted RBP19.11■□□□□ 0.65
NFIX-210ENST00000588228 SPDYE2BA6NHP3 402 aa19.11■□□□□ 0.65
NFIX-210ENST00000588228 NFKBIEO00221 500 aa19.11■□□□□ 0.65
NFIX-210ENST00000588228 SPDYE6P0CI01 402 aa19.11■□□□□ 0.65
NFIX-210ENST00000588228 AKR1B1P15121 316 aa19.11■□□□□ 0.65
NFIX-210ENST00000588228 NASPP49321 788 aaPredicted RBP19.11■□□□□ 0.65
NFIX-210ENST00000588228 TPRNQ4KMQ1 711 aa19.11■□□□□ 0.65
NFIX-210ENST00000588228 DIS3L2Q8IYB7 885 aaKnown RBP19.11■□□□□ 0.65
NFIX-210ENST00000588228 KLHL34Q8N239 644 aa19.11■□□□□ 0.65
NFIX-210ENST00000588228 CCDC17Q96LX7 622 aa19.11■□□□□ 0.65
NFIX-210ENST00000588228 LZTS2Q9BRK4 669 aa19.11■□□□□ 0.65
NFIX-210ENST00000588228 MTMR4Q9NYA4 1195 aa19.11■□□□□ 0.65
NFIX-210ENST00000588228 MAD2L2Q9UI95 211 aa19.11■□□□□ 0.65
NFIX-210ENST00000588228 KCNJ14Q9UNX9 436 aa19.11■□□□□ 0.65
NFIX-210ENST00000588228 BRCA1P38398 1863 aaKnown RBP19.1■□□□□ 0.65
NFIX-210ENST00000588228 ATRNL1Q5VV63 1379 aa19.1■□□□□ 0.65
NFIX-210ENST00000588228 DDTLA6NHG4 134 aaPredicted RBP19.1■□□□□ 0.65
NFIX-210ENST00000588228 LETM1O95202 739 aaPredicted RBP19.1■□□□□ 0.65
NFIX-210ENST00000588228 MRE11P49959 708 aa19.1■□□□□ 0.65
NFIX-210ENST00000588228 LINC00301Q8NCQ3 95 aa19.1■□□□□ 0.65
NFIX-210ENST00000588228 KCNG4Q8TDN1 519 aa19.1■□□□□ 0.65
NFIX-210ENST00000588228 JDP2Q8WYK2 163 aa19.1■□□□□ 0.65
NFIX-210ENST00000588228 TMOD2Q9NZR1 351 aa19.1■□□□□ 0.65
NFIX-210ENST00000588228 SYCE3A1L190 88 aa19.09■□□□□ 0.65
NFIX-210ENST00000588228 PALM3A6NDB9 673 aaPredicted RBP19.09■□□□□ 0.65
NFIX-210ENST00000588228 CXCL9Q07325 125 aa19.09■□□□□ 0.65
NFIX-210ENST00000588228 DLGAP5Q15398 846 aa19.09■□□□□ 0.65
NFIX-210ENST00000588228 PPP4R3BQ5MIZ7 849 aa19.09■□□□□ 0.65
NFIX-210ENST00000588228 ANO1Q5XXA6 986 aa19.09■□□□□ 0.65
NFIX-210ENST00000588228 LRSAM1Q6UWE0 723 aa19.09■□□□□ 0.65
NFIX-210ENST00000588228 SH3BP5LQ7L8J4 393 aa19.09■□□□□ 0.65
NFIX-210ENST00000588228 FOXP4Q8IVH2 680 aaPredicted RBP19.09■□□□□ 0.65
NFIX-210ENST00000588228 NOSTRINQ8IVI9 506 aa19.09■□□□□ 0.65
NFIX-210ENST00000588228 ZSCAN29Q8IWY8 852 aaPredicted RBP19.09■□□□□ 0.65
NFIX-210ENST00000588228 BICD2Q8TD16 824 aa19.09■□□□□ 0.65
NFIX-210ENST00000588228 BCS1LQ9Y276 419 aa19.09■□□□□ 0.65
NFIX-210ENST00000588228 ZBTB12Q9Y330 459 aaPredicted RBP19.09■□□□□ 0.65
NFIX-210ENST00000588228 CLIC4Q9Y696 253 aa19.09■□□□□ 0.65
NFIX-210ENST00000588228 LTBP3Q9NS15 1303 aa19.09■□□□□ 0.65
NFIX-210ENST00000588228 BTBD18B2RXH4 712 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms