RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 CEP95Q96GE4 821 aa12.65□□□□□ -0.38
SMARCA4-213ENST00000587988 ZIC5Q96T25 663 aa12.65□□□□□ -0.38
SMARCA4-213ENST00000587988 ZKSCAN3Q9BRR0 538 aa12.65□□□□□ -0.38
SMARCA4-213ENST00000587988 CNNM2Q9H8M5 875 aa12.65□□□□□ -0.38
SMARCA4-213ENST00000587988 PLIN4Q96Q06 1357 aa12.65□□□□□ -0.38
SMARCA4-213ENST00000587988 A0A1W2PRG0 241 aa12.64□□□□□ -0.39
SMARCA4-213ENST00000587988 EIF5BO60841 1220 aaKnown RBP12.64□□□□□ -0.39
SMARCA4-213ENST00000587988 EEF2P13639 858 aaKnown RBP12.64□□□□□ -0.39
SMARCA4-213ENST00000587988 ZKSCAN1P17029 563 aaPredicted RBP12.64□□□□□ -0.39
SMARCA4-213ENST00000587988 ECE1P42892 770 aa12.64□□□□□ -0.39
SMARCA4-213ENST00000587988 ANTXR2P58335 489 aa12.64□□□□□ -0.39
SMARCA4-213ENST00000587988 ICA1Q05084 483 aa12.64□□□□□ -0.39
SMARCA4-213ENST00000587988 TRDNQ13061 729 aa12.64□□□□□ -0.39
SMARCA4-213ENST00000587988 SPP2Q13103 211 aa12.64□□□□□ -0.39
SMARCA4-213ENST00000587988 PPIL2Q13356 520 aa12.64□□□□□ -0.39
SMARCA4-213ENST00000587988 DGKZQ13574 1117 aa12.64□□□□□ -0.39
SMARCA4-213ENST00000587988 ZNF280CQ8ND82 737 aa12.64□□□□□ -0.39
SMARCA4-213ENST00000587988 CAPNS2Q96L46 248 aa12.64□□□□□ -0.39
SMARCA4-213ENST00000587988 KANSL2Q9H9L4 492 aa12.64□□□□□ -0.39
SMARCA4-213ENST00000587988 TCP11L1Q9NUJ3 509 aa12.64□□□□□ -0.39
SMARCA4-213ENST00000587988 MTMR4Q9NYA4 1195 aa12.64□□□□□ -0.39
SMARCA4-213ENST00000587988 TRIM75PA6NK02 468 aa12.63□□□□□ -0.39
SMARCA4-213ENST00000587988 AOC2O75106 756 aa12.63□□□□□ -0.39
SMARCA4-213ENST00000587988 CPA1P15085 419 aa12.63□□□□□ -0.39
SMARCA4-213ENST00000587988 MCCP23508 829 aa12.63□□□□□ -0.39
SMARCA4-213ENST00000587988 VEGFBP49765 207 aa12.63□□□□□ -0.39
SMARCA4-213ENST00000587988 ATP2B2Q01814 1243 aa12.63□□□□□ -0.39
SMARCA4-213ENST00000587988 RALYLQ86SE5 291 aaKnown RBP12.63□□□□□ -0.39
SMARCA4-213ENST00000587988 CCDC102AQ96A19 550 aa12.63□□□□□ -0.39
SMARCA4-213ENST00000587988 MS4A4AQ96JQ5 239 aa12.63□□□□□ -0.39
SMARCA4-213ENST00000587988 JAKMIP1Q96N16 626 aaKnown RBP12.63□□□□□ -0.39
SMARCA4-213ENST00000587988 NEK1Q96PY6 1258 aa12.63□□□□□ -0.39
SMARCA4-213ENST00000587988 WDR18Q9BV38 432 aa12.63□□□□□ -0.39
SMARCA4-213ENST00000587988 AS3MTQ9HBK9 375 aa12.63□□□□□ -0.39
SMARCA4-213ENST00000587988 CLIP2Q9UDT6 1046 aa12.63□□□□□ -0.39
SMARCA4-213ENST00000587988 KCNH4Q9UQ05 1017 aa12.63□□□□□ -0.39
SMARCA4-213ENST00000587988 WDR33Q9C0J8 1336 aaKnown RBP12.62□□□□□ -0.39
SMARCA4-213ENST00000587988 PTPRFP10586 1907 aa12.62□□□□□ -0.39
SMARCA4-213ENST00000587988 ZBTB48P10074 688 aaPredicted RBP12.62□□□□□ -0.39
SMARCA4-213ENST00000587988 NOVP48745 357 aa12.62□□□□□ -0.39
SMARCA4-213ENST00000587988 MTMR2Q13614 643 aa12.62□□□□□ -0.39
SMARCA4-213ENST00000587988 KRT32Q14532 448 aa12.62□□□□□ -0.39
SMARCA4-213ENST00000587988 KIAA1755Q5JYT7 1200 aa12.62□□□□□ -0.39
SMARCA4-213ENST00000587988 RCSD1Q6JBY9 416 aa12.62□□□□□ -0.39
SMARCA4-213ENST00000587988 TCEANC2Q96MN5 208 aa12.62□□□□□ -0.39
SMARCA4-213ENST00000587988 TBC1D2Q9BYX2 928 aa12.62□□□□□ -0.39
SMARCA4-213ENST00000587988 C22orf23Q9BZE7 217 aa12.62□□□□□ -0.39
SMARCA4-213ENST00000587988 NYAP2Q9P242 653 aa12.62□□□□□ -0.39
SMARCA4-213ENST00000587988 MYH4Q9Y623 1939 aa12.62□□□□□ -0.39
SMARCA4-213ENST00000587988 USP17L10C9JJH3 530 aa12.61□□□□□ -0.39
SMARCA4-213ENST00000587988 CXCL11O14625 94 aa12.61□□□□□ -0.39
SMARCA4-213ENST00000587988 TTLL1O95922 423 aa12.61□□□□□ -0.39
SMARCA4-213ENST00000587988 HMGCS2P54868 508 aa12.61□□□□□ -0.39
SMARCA4-213ENST00000587988 BACE1P56817 501 aa12.61□□□□□ -0.39
SMARCA4-213ENST00000587988 EXOSC10Q01780 885 aaKnown RBP12.61□□□□□ -0.39
SMARCA4-213ENST00000587988 KIF23Q02241 960 aaPredicted RBP12.61□□□□□ -0.39
SMARCA4-213ENST00000587988 MOGSQ13724 837 aa12.61□□□□□ -0.39
SMARCA4-213ENST00000587988 SEC23AQ15436 765 aa12.61□□□□□ -0.39
SMARCA4-213ENST00000587988 ZYXQ15942 572 aaKnown RBP12.61□□□□□ -0.39
SMARCA4-213ENST00000587988 IQCA1Q86XH1 822 aa12.61□□□□□ -0.39
SMARCA4-213ENST00000587988 LRRC47Q8N1G4 583 aaKnown RBP12.61□□□□□ -0.39
SMARCA4-213ENST00000587988 ENAHQ8N8S7 591 aaPredicted RBP12.61□□□□□ -0.39
SMARCA4-213ENST00000587988 IL17RAQ96F46 866 aa12.61□□□□□ -0.39
SMARCA4-213ENST00000587988 ZSCAN10Q96SZ4 725 aaPredicted RBP12.61□□□□□ -0.39
SMARCA4-213ENST00000587988 LRRC2Q9BYS8 371 aa12.61□□□□□ -0.39
SMARCA4-213ENST00000587988 SENP2Q9HC62 589 aa12.61□□□□□ -0.39
SMARCA4-213ENST00000587988 GPHNQ9NQX3 736 aaPredicted RBP12.61□□□□□ -0.39
SMARCA4-213ENST00000587988 STX8Q9UNK0 236 aa12.61□□□□□ -0.39
SMARCA4-213ENST00000587988 TMX2Q9Y320 296 aa12.61□□□□□ -0.39
SMARCA4-213ENST00000587988 TNKSO95271 1327 aa12.61□□□□□ -0.39
SMARCA4-213ENST00000587988 A0A0G2JLL6 359 aaPredicted RBP12.6□□□□□ -0.39
SMARCA4-213ENST00000587988 PRC1O43663 620 aa12.6□□□□□ -0.39
SMARCA4-213ENST00000587988 CASTP20810 708 aaKnown RBP12.6□□□□□ -0.39
SMARCA4-213ENST00000587988 MCM5P33992 734 aa12.6□□□□□ -0.39
SMARCA4-213ENST00000587988 NT5C2P49902 561 aa12.6□□□□□ -0.39
SMARCA4-213ENST00000587988 GTF2A2P52657 109 aa12.6□□□□□ -0.39
SMARCA4-213ENST00000587988 ANAPC15P60006 121 aa12.6□□□□□ -0.39
SMARCA4-213ENST00000587988 SNAPC2Q13487 334 aa12.6□□□□□ -0.39
SMARCA4-213ENST00000587988 SH3D19Q5HYK7 790 aa12.6□□□□□ -0.39
SMARCA4-213ENST00000587988 DHX32Q7L7V1 743 aaKnown RBP12.6□□□□□ -0.39
SMARCA4-213ENST00000587988 PRRT2Q7Z6L0 340 aaPredicted RBP12.6□□□□□ -0.39
SMARCA4-213ENST00000587988 DNAJC5GQ8N7S2 189 aa12.6□□□□□ -0.39
SMARCA4-213ENST00000587988 IGDCC4Q8TDY8 1250 aa12.6□□□□□ -0.39
SMARCA4-213ENST00000587988 BRI3BPQ8WY22 251 aa12.6□□□□□ -0.39
SMARCA4-213ENST00000587988 ANKS1AQ92625 1134 aa12.6□□□□□ -0.39
SMARCA4-213ENST00000587988 MKL1Q969V6 931 aa12.6□□□□□ -0.39
SMARCA4-213ENST00000587988 KIF2CQ99661 725 aa12.6□□□□□ -0.39
SMARCA4-213ENST00000587988 TMEM47Q9BQJ4 181 aa12.6□□□□□ -0.39
SMARCA4-213ENST00000587988 UBAC1Q9BSL1 405 aa12.6□□□□□ -0.39
SMARCA4-213ENST00000587988 KIAA1683Q9H0B3 1180 aa12.6□□□□□ -0.39
SMARCA4-213ENST00000587988 ARHGEF10LQ9HCE6 1279 aa12.6□□□□□ -0.39
SMARCA4-213ENST00000587988 ZSWIM6Q9HCJ5 1215 aa12.6□□□□□ -0.39
SMARCA4-213ENST00000587988 EMILIN3Q9NT22 766 aa12.6□□□□□ -0.39
SMARCA4-213ENST00000587988 CCL15-CCL14A0A0B4J2E2 113 aa12.59□□□□□ -0.39
SMARCA4-213ENST00000587988 TESPA1A2RU30 521 aaPredicted RBP12.59□□□□□ -0.39
SMARCA4-213ENST00000587988 C19orf81C9J6K1 198 aa12.59□□□□□ -0.39
SMARCA4-213ENST00000587988 IFIT3O14879 490 aaKnown RBP12.59□□□□□ -0.39
SMARCA4-213ENST00000587988 RPS6KB1P23443 525 aa12.59□□□□□ -0.39
SMARCA4-213ENST00000587988 PSMA5P28066 241 aa12.59□□□□□ -0.39
SMARCA4-213ENST00000587988 RBM25P49756 843 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms