RNA–Protein interactions for RNA: ENST00000587987.5

U2AF1L4-208, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 1 (best)

Gene U2AF1L4, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-208	ENST00000587987	CPA4	Q9UI42	421 aa		11.23	□□□□□ -0.61
U2AF1L4-208	ENST00000587987	RBM8A	Q9Y5S9	174 aa	Known RBP	11.23	□□□□□ -0.61
U2AF1L4-208	ENST00000587987	FOCAD	Q5VW36	1801 aa		11.23	□□□□□ -0.61
U2AF1L4-208	ENST00000587987	IRF6	O14896	467 aa		11.22	□□□□□ -0.61
U2AF1L4-208	ENST00000587987	FMNL1	O95466	1100 aa	Predicted RBP	11.22	□□□□□ -0.61
U2AF1L4-208	ENST00000587987	PSMC4	P43686	418 aa		11.22	□□□□□ -0.61
U2AF1L4-208	ENST00000587987	MAP3K10	Q02779	954 aa		11.22	□□□□□ -0.61
U2AF1L4-208	ENST00000587987	PPARA	Q07869	468 aa		11.22	□□□□□ -0.61
U2AF1L4-208	ENST00000587987	KRT32	Q14532	448 aa		11.22	□□□□□ -0.61
U2AF1L4-208	ENST00000587987	TSGA10IP	Q3SY00	556 aa		11.22	□□□□□ -0.61
U2AF1L4-208	ENST00000587987	SZT2	Q5T011	3432 aa		11.22	□□□□□ -0.61
U2AF1L4-208	ENST00000587987	NKX2-3	Q8TAU0	364 aa		11.22	□□□□□ -0.61
U2AF1L4-208	ENST00000587987	ZKSCAN4	Q969J2	545 aa	Predicted RBP	11.22	□□□□□ -0.61
U2AF1L4-208	ENST00000587987	TRIM47	Q96LD4	638 aa		11.22	□□□□□ -0.61
U2AF1L4-208	ENST00000587987	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	11.22	□□□□□ -0.61
U2AF1L4-208	ENST00000587987	BIN2	Q9UBW5	565 aa	Predicted RBP	11.22	□□□□□ -0.61
U2AF1L4-208	ENST00000587987	SRRD	Q9UH36	339 aa		11.22	□□□□□ -0.61
U2AF1L4-208	ENST00000587987	SERPINB13	Q9UIV8	391 aa		11.22	□□□□□ -0.61
U2AF1L4-208	ENST00000587987	PALD1	Q9ULE6	856 aa		11.22	□□□□□ -0.61
U2AF1L4-208	ENST00000587987	CDK5RAP2	Q96SN8	1893 aa		11.21	□□□□□ -0.61
U2AF1L4-208	ENST00000587987	MYPN	Q86TC9	1320 aa		11.21	□□□□□ -0.61
U2AF1L4-208	ENST00000587987	DDTL	A6NHG4	134 aa	Predicted RBP	11.21	□□□□□ -0.61
U2AF1L4-208	ENST00000587987	FOXP2	O15409	715 aa		11.21	□□□□□ -0.61
U2AF1L4-208	ENST00000587987	CCL5	P13501	91 aa		11.21	□□□□□ -0.61
U2AF1L4-208	ENST00000587987	OSBP	P22059	807 aa		11.21	□□□□□ -0.61
U2AF1L4-208	ENST00000587987	CTGF	P29279	349 aa		11.21	□□□□□ -0.61
U2AF1L4-208	ENST00000587987	GRK4	P32298	578 aa		11.21	□□□□□ -0.61
U2AF1L4-208	ENST00000587987	HSPA4	P34932	840 aa		11.21	□□□□□ -0.61
U2AF1L4-208	ENST00000587987	ANAPC15	P60006	121 aa		11.21	□□□□□ -0.61
U2AF1L4-208	ENST00000587987	TRDN	Q13061	729 aa		11.21	□□□□□ -0.61
U2AF1L4-208	ENST00000587987	PPIL2	Q13356	520 aa		11.21	□□□□□ -0.61
U2AF1L4-208	ENST00000587987	CREB3L3	Q68CJ9	461 aa		11.21	□□□□□ -0.61
U2AF1L4-208	ENST00000587987	MFSD6	Q6ZSS7	791 aa		11.21	□□□□□ -0.61
U2AF1L4-208	ENST00000587987	ZFPM1	Q8IX07	1006 aa		11.21	□□□□□ -0.61
U2AF1L4-208	ENST00000587987	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	11.21	□□□□□ -0.61
U2AF1L4-208	ENST00000587987	KCNB2	Q92953	911 aa		11.21	□□□□□ -0.61
U2AF1L4-208	ENST00000587987	CNNM2	Q9H8M5	875 aa		11.21	□□□□□ -0.61
U2AF1L4-208	ENST00000587987	MKNK2	Q9HBH9	465 aa		11.21	□□□□□ -0.61
U2AF1L4-208	ENST00000587987	SAP30BP	Q9UHR5	308 aa	Known RBP	11.21	□□□□□ -0.61
U2AF1L4-208	ENST00000587987	NR2E3	Q9Y5X4	410 aa		11.21	□□□□□ -0.61
U2AF1L4-208	ENST00000587987	MYH1	P12882	1939 aa		11.21	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	FARP2	O94887	1054 aa	Predicted RBP	11.2	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	SEC24B	O95487	1268 aa		11.2	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	GJB1	P08034	283 aa		11.2	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	CYP21A2	P08686	494 aa		11.2	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	HMGB1	P09429	215 aa	Known RBP	11.2	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	FGR	P09769	529 aa		11.2	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	PSMA5	P28066	241 aa		11.2	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	HOXD10	P28358	340 aa		11.2	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	GJA8	P48165	433 aa		11.2	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	PLCD1	P51178	756 aa		11.2	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	PPP4R3B	Q5MIZ7	849 aa		11.2	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	AKNAD1	Q5T1N1	836 aa		11.2	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	C17orf99	Q6UX52	265 aa		11.2	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	C16orf86	Q6ZW13	317 aa		11.2	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	SH3BP5L	Q7L8J4	393 aa		11.2	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	ZNF444	Q8N0Y2	327 aa	Predicted RBP	11.2	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	STAG1	Q8WVM7	1258 aa		11.2	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	CCDC17	Q96LX7	622 aa		11.2	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	ZNF341	Q9BYN7	854 aa		11.2	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	KRT23	Q9C075	422 aa		11.2	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	RNF208	Q9H0X6	261 aa		11.2	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	PRO3102	Q9H379	93 aa		11.2	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	GINM1	Q9NU53	330 aa		11.2	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	CUL9	Q8IWT3	2517 aa		11.19	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	NAV1	Q8NEY1	1877 aa		11.19	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	RANBP2	P49792	3224 aa	Known RBP	11.19	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	ROBO3	Q96MS0	1386 aa		11.19	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	PDHX	O00330	501 aa		11.19	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	SLC27A2	O14975	620 aa		11.19	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	ORC4	O43929	436 aa		11.19	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	CDK8	P49336	464 aa		11.19	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	UBXN2A	P68543	259 aa		11.19	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	GABPA	Q06546	454 aa		11.19	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	CCDC178	Q5BJE1	867 aa		11.19	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	UBE2Q1	Q7Z7E8	422 aa		11.19	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	C22orf23	Q9BZE7	217 aa		11.19	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	11.19	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	ADGRA2	Q96PE1	1338 aa		11.18	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	BAZ2A	Q9UIF9	1905 aa	Known RBP	11.18	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	SOX1	O00570	391 aa	Predicted RBP	11.18	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	INPP5B	P32019	993 aa		11.18	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	RBM25	P49756	843 aa	Known RBP	11.18	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	PRKCZ	Q05513	592 aa		11.18	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	PPAT	Q06203	517 aa		11.18	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	CERKL	Q49MI3	558 aa	Predicted RBP	11.18	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	TATDN1	Q6P1N9	297 aa		11.18	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	MIGA2	Q7L4E1	593 aa		11.18	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	ANKRD23	Q86SG2	305 aa		11.18	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	NCOA7	Q8NI08	942 aa		11.18	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	U2AF1L4	Q8WU68	220 aa	Known RBP	11.18	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	ESR2	Q92731	530 aa		11.18	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	IL17RA	Q96F46	866 aa		11.18	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	TM6SF1	Q9BZW5	370 aa		11.18	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	UNC93B1	Q9H1C4	597 aa		11.18	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	CYP2D7	A0A087X1C5	515 aa		11.17	□□□□□ -0.62
U2AF1L4-208	ENST00000587987		E7EWF7	191 aa		11.17	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	EVI5	O60447	810 aa		11.17	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	CYP2D6	P10635	497 aa		11.17	□□□□□ -0.62
U2AF1L4-208	ENST00000587987	FCGRT	P55899	365 aa		11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms