RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.06□□□□□ -0.64
LINC01539-201ENST00000587904 SUGT1Q9Y2Z0 365 aa11.06□□□□□ -0.64
LINC01539-201ENST00000587904 NAV1Q8NEY1 1877 aa11.06□□□□□ -0.64
LINC01539-201ENST00000587904 ROBO3Q96MS0 1386 aa11.06□□□□□ -0.64
LINC01539-201ENST00000587904 GOLGA6L4A6NEF3 574 aa11.05□□□□□ -0.64
LINC01539-201ENST00000587904 PLCG2P16885 1265 aa11.05□□□□□ -0.64
LINC01539-201ENST00000587904 SRLQ86TD4 932 aa11.05□□□□□ -0.64
LINC01539-201ENST00000587904 NKX2-3Q8TAU0 364 aa11.05□□□□□ -0.64
LINC01539-201ENST00000587904 COA1Q9GZY4 146 aa11.05□□□□□ -0.64
LINC01539-201ENST00000587904 POLLQ9UGP5 575 aa11.05□□□□□ -0.64
LINC01539-201ENST00000587904 TNKSO95271 1327 aa11.05□□□□□ -0.64
LINC01539-201ENST00000587904 ECM29Q5VYK3 1845 aa11.05□□□□□ -0.64
LINC01539-201ENST00000587904 USP17L12C9JPN9 530 aa11.05□□□□□ -0.64
LINC01539-201ENST00000587904 USP17L21D6R901 530 aa11.05□□□□□ -0.64
LINC01539-201ENST00000587904 CALM1P0DP23 149 aa11.05□□□□□ -0.64
LINC01539-201ENST00000587904 CALM2P0DP24 149 aa11.05□□□□□ -0.64
LINC01539-201ENST00000587904 CALM3P0DP25 149 aa11.05□□□□□ -0.64
LINC01539-201ENST00000587904 IFNAR1P17181 557 aa11.05□□□□□ -0.64
LINC01539-201ENST00000587904 IARSP41252 1262 aaKnown RBP11.05□□□□□ -0.64
LINC01539-201ENST00000587904 TPM4P67936 248 aa11.05□□□□□ -0.64
LINC01539-201ENST00000587904 PDE4BQ07343 736 aa11.05□□□□□ -0.64
LINC01539-201ENST00000587904 GPS2Q13227 327 aa11.05□□□□□ -0.64
LINC01539-201ENST00000587904 SEC23AQ15436 765 aa11.05□□□□□ -0.64
LINC01539-201ENST00000587904 RTN1Q16799 776 aa11.05□□□□□ -0.64
LINC01539-201ENST00000587904 KMT5BQ4FZB7 885 aa11.05□□□□□ -0.64
LINC01539-201ENST00000587904 C17orf53Q8N3J3 647 aaPredicted RBP11.05□□□□□ -0.64
LINC01539-201ENST00000587904 IQUBQ8NA54 791 aa11.05□□□□□ -0.64
LINC01539-201ENST00000587904 ZNF592Q92610 1267 aa11.05□□□□□ -0.64
LINC01539-201ENST00000587904 FAM163AQ96GL9 167 aaPredicted RBP11.05□□□□□ -0.64
LINC01539-201ENST00000587904 CEP89Q96ST8 783 aa11.05□□□□□ -0.64
LINC01539-201ENST00000587904 INCENPQ9NQS7 918 aa11.05□□□□□ -0.64
LINC01539-201ENST00000587904 C6orf229H3BNL8 230 aa11.04□□□□□ -0.64
LINC01539-201ENST00000587904 CDC27P30260 824 aa11.04□□□□□ -0.64
LINC01539-201ENST00000587904 ADD1P35611 737 aaKnown RBP11.04□□□□□ -0.64
LINC01539-201ENST00000587904 GYS2P54840 703 aa11.04□□□□□ -0.64
LINC01539-201ENST00000587904 NTRK3Q16288 839 aa11.04□□□□□ -0.64
LINC01539-201ENST00000587904 LRCH2Q5VUJ6 765 aa11.04□□□□□ -0.64
LINC01539-201ENST00000587904 FAM173BQ6P4H8 233 aa11.04□□□□□ -0.64
LINC01539-201ENST00000587904 TRIM22Q8IYM9 498 aa11.04□□□□□ -0.64
LINC01539-201ENST00000587904 ZNF654Q8IZM8 581 aa11.04□□□□□ -0.64
LINC01539-201ENST00000587904 CCDC112Q8NEF3 446 aa11.04□□□□□ -0.64
LINC01539-201ENST00000587904 DRC1Q96MC2 740 aa11.04□□□□□ -0.64
LINC01539-201ENST00000587904 ZSCAN10Q96SZ4 725 aaPredicted RBP11.04□□□□□ -0.64
LINC01539-201ENST00000587904 SENP2Q9HC62 589 aa11.04□□□□□ -0.64
LINC01539-201ENST00000587904 V9GYY5 206 aaPredicted RBP11.04□□□□□ -0.64
LINC01539-201ENST00000587904 MYH2Q9UKX2 1941 aa11.04□□□□□ -0.64
LINC01539-201ENST00000587904 DDX60LQ5H9U9 1706 aaKnown RBP11.04□□□□□ -0.64
LINC01539-201ENST00000587904 FMNL1O95466 1100 aaPredicted RBP11.04□□□□□ -0.64
LINC01539-201ENST00000587904 MAGEA9P43362 315 aa11.04□□□□□ -0.64
LINC01539-201ENST00000587904 USP5P45974 858 aa11.04□□□□□ -0.64
LINC01539-201ENST00000587904 SSRP1Q08945 709 aaKnown RBP11.04□□□□□ -0.64
LINC01539-201ENST00000587904 MCTP2Q6DN12 878 aa11.04□□□□□ -0.64
LINC01539-201ENST00000587904 STYK1Q6J9G0 422 aa11.04□□□□□ -0.64
LINC01539-201ENST00000587904 KRBA2Q6ZNG9 492 aa11.04□□□□□ -0.64
LINC01539-201ENST00000587904 RNF214Q8ND24 703 aa11.04□□□□□ -0.64
LINC01539-201ENST00000587904 ALG1Q9BT22 464 aa11.04□□□□□ -0.64
LINC01539-201ENST00000587904 RTFDC1Q9BY42 306 aaPredicted RBP11.04□□□□□ -0.64
LINC01539-201ENST00000587904 FAM217BQ9NTX9 383 aaPredicted RBP11.04□□□□□ -0.64
LINC01539-201ENST00000587904 STK32BQ9NY57 414 aa11.04□□□□□ -0.64
LINC01539-201ENST00000587904 MKRN1Q9UHC7 482 aaKnown RBP11.04□□□□□ -0.64
LINC01539-201ENST00000587904 RCOR1Q9UKL0 485 aa11.04□□□□□ -0.64
LINC01539-201ENST00000587904 GAKO14976 1311 aa11.03□□□□□ -0.64
LINC01539-201ENST00000587904 GPR75-ASB3A0A0A6YYF3 556 aa11.03□□□□□ -0.64
LINC01539-201ENST00000587904 DDAH1O94760 285 aa11.03□□□□□ -0.64
LINC01539-201ENST00000587904 ADCY5O95622 1261 aa11.03□□□□□ -0.64
LINC01539-201ENST00000587904 TRIM29Q14134 588 aa11.03□□□□□ -0.64
LINC01539-201ENST00000587904 C11orf91Q3C1V1 193 aa11.03□□□□□ -0.64
LINC01539-201ENST00000587904 CCDC178Q5BJE1 867 aa11.03□□□□□ -0.64
LINC01539-201ENST00000587904 SLC51AQ86UW1 340 aa11.03□□□□□ -0.64
LINC01539-201ENST00000587904 RAB11FIP4Q86YS3 637 aa11.03□□□□□ -0.64
LINC01539-201ENST00000587904 MPNDQ8N594 471 aa11.03□□□□□ -0.64
LINC01539-201ENST00000587904 GPR101Q96P66 508 aaPredicted RBP11.03□□□□□ -0.64
LINC01539-201ENST00000587904 EYA3Q99504 573 aa11.03□□□□□ -0.64
LINC01539-201ENST00000587904 DDX19AQ9NUU7 478 aaKnown RBP11.03□□□□□ -0.64
LINC01539-201ENST00000587904 JAG2Q9Y219 1238 aa11.03□□□□□ -0.64
LINC01539-201ENST00000587904 TRIM66O15016 1216 aa11.02□□□□□ -0.64
LINC01539-201ENST00000587904 RANBP6O60518 1105 aaKnown RBP11.02□□□□□ -0.64
LINC01539-201ENST00000587904 KIF23Q02241 960 aaPredicted RBP11.02□□□□□ -0.64
LINC01539-201ENST00000587904 SLC15A2Q16348 729 aa11.02□□□□□ -0.64
LINC01539-201ENST00000587904 MFSD14BQ5SR56 506 aa11.02□□□□□ -0.64
LINC01539-201ENST00000587904 IFIT1BQ5T764 474 aaKnown RBP11.02□□□□□ -0.64
LINC01539-201ENST00000587904 C12orf60Q5U649 245 aa11.02□□□□□ -0.64
LINC01539-201ENST00000587904 DPP8Q6V1X1 898 aaPredicted RBP11.02□□□□□ -0.64
LINC01539-201ENST00000587904 CATIPQ7Z7H3 387 aa11.02□□□□□ -0.64
LINC01539-201ENST00000587904 CCDC125Q86Z20 511 aa11.02□□□□□ -0.64
LINC01539-201ENST00000587904 ENAHQ8N8S7 591 aaPredicted RBP11.02□□□□□ -0.64
LINC01539-201ENST00000587904 JMYQ8N9B5 988 aa11.02□□□□□ -0.64
LINC01539-201ENST00000587904 FANCBQ8NB91 859 aa11.02□□□□□ -0.64
LINC01539-201ENST00000587904 GOLGA5Q8TBA6 731 aa11.02□□□□□ -0.64
LINC01539-201ENST00000587904 ZNF287Q9HBT7 754 aa11.02□□□□□ -0.64
LINC01539-201ENST00000587904 MCM9Q9NXL9 1143 aa11.02□□□□□ -0.64
LINC01539-201ENST00000587904 RTEL1Q9NZ71 1219 aa11.02□□□□□ -0.64
LINC01539-201ENST00000587904 TFIP11Q9UBB9 837 aaKnown RBP11.02□□□□□ -0.64
LINC01539-201ENST00000587904 USP25Q9UHP3 1055 aa11.02□□□□□ -0.64
LINC01539-201ENST00000587904 CYP2D7A0A087X1C5 515 aa11.02□□□□□ -0.65
LINC01539-201ENST00000587904 DEXIO95424 95 aa11.02□□□□□ -0.65
LINC01539-201ENST00000587904 YEATS4O95619 227 aa11.02□□□□□ -0.65
LINC01539-201ENST00000587904 RXRAP19793 462 aa11.02□□□□□ -0.65
LINC01539-201ENST00000587904 FOSBP53539 338 aa11.02□□□□□ -0.65
LINC01539-201ENST00000587904 GUCY1B3Q02153 619 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms