RNA–Protein interactions for RNA: ENST00000587165.1

LINC01140-208, Transcript of long intergenic non-protein coding RNA 1140, human

TSL 3

Gene LINC01140, Length 426 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01140-208	ENST00000587165	DOCK1	Q14185	1865 aa		6.11	□□□□□ -1.43
LINC01140-208	ENST00000587165	MINDY4B	A8MYZ0	360 aa		6.1	□□□□□ -1.43
LINC01140-208	ENST00000587165	HIP1	O00291	1037 aa		6.1	□□□□□ -1.43
LINC01140-208	ENST00000587165	RAD21	O60216	631 aa		6.1	□□□□□ -1.43
LINC01140-208	ENST00000587165	ECM2	O94769	699 aa	Predicted RBP	6.1	□□□□□ -1.43
LINC01140-208	ENST00000587165	CYP2D6	P10635	497 aa		6.1	□□□□□ -1.43
LINC01140-208	ENST00000587165	VCAM1	P19320	739 aa		6.1	□□□□□ -1.43
LINC01140-208	ENST00000587165	MAPK4	P31152	587 aa		6.1	□□□□□ -1.43
LINC01140-208	ENST00000587165	GRK4	P32298	578 aa		6.1	□□□□□ -1.43
LINC01140-208	ENST00000587165	CDK8	P49336	464 aa		6.1	□□□□□ -1.43
LINC01140-208	ENST00000587165	PDE1A	P54750	535 aa		6.1	□□□□□ -1.43
LINC01140-208	ENST00000587165	HERVK_113	P62684	666 aa		6.1	□□□□□ -1.43
LINC01140-208	ENST00000587165	PDE4B	Q07343	736 aa		6.1	□□□□□ -1.43
LINC01140-208	ENST00000587165	RRP1B	Q14684	758 aa	Known RBP	6.1	□□□□□ -1.43
LINC01140-208	ENST00000587165	SEPT2	Q15019	361 aa		6.1	□□□□□ -1.43
LINC01140-208	ENST00000587165	SBK1	Q52WX2	424 aa		6.1	□□□□□ -1.43
LINC01140-208	ENST00000587165	ZMYM1	Q5SVZ6	1142 aa		6.1	□□□□□ -1.43
LINC01140-208	ENST00000587165	C12orf60	Q5U649	245 aa		6.1	□□□□□ -1.43
LINC01140-208	ENST00000587165	B4GALNT3	Q6L9W6	998 aa		6.1	□□□□□ -1.43
LINC01140-208	ENST00000587165	C16orf86	Q6ZW13	317 aa		6.1	□□□□□ -1.43
LINC01140-208	ENST00000587165	CHD1L	Q86WJ1	897 aa		6.1	□□□□□ -1.43
LINC01140-208	ENST00000587165	SMC5	Q8IY18	1101 aa		6.1	□□□□□ -1.43
LINC01140-208	ENST00000587165	PIAS4	Q8N2W9	510 aa	Predicted RBP	6.1	□□□□□ -1.43
LINC01140-208	ENST00000587165	SLAIN1	Q8ND83	568 aa		6.1	□□□□□ -1.43
LINC01140-208	ENST00000587165	GPRC5A	Q8NFJ5	357 aa		6.1	□□□□□ -1.43
LINC01140-208	ENST00000587165	NKX2-3	Q8TAU0	364 aa		6.1	□□□□□ -1.43
LINC01140-208	ENST00000587165	PI4K2B	Q8TCG2	481 aa		6.1	□□□□□ -1.43
LINC01140-208	ENST00000587165	OTUD7A	Q8TE49	926 aa	Predicted RBP	6.1	□□□□□ -1.43
LINC01140-208	ENST00000587165	SOCS4	Q8WXH5	440 aa		6.1	□□□□□ -1.43
LINC01140-208	ENST00000587165	LPAR1	Q92633	364 aa		6.1	□□□□□ -1.43
LINC01140-208	ENST00000587165	OSBP2	Q969R2	916 aa		6.1	□□□□□ -1.43
LINC01140-208	ENST00000587165	DYNLL2	Q96FJ2	89 aa		6.1	□□□□□ -1.43
LINC01140-208	ENST00000587165	C12orf42	Q96LP6	360 aa		6.1	□□□□□ -1.43
LINC01140-208	ENST00000587165	PAGR1	Q9BTK6	254 aa		6.1	□□□□□ -1.43
LINC01140-208	ENST00000587165	TANGO6	Q9C0B7	1094 aa		6.1	□□□□□ -1.43
LINC01140-208	ENST00000587165	ARHGAP39	Q9C0H5	1083 aa		6.1	□□□□□ -1.43
LINC01140-208	ENST00000587165	KANSL2	Q9H9L4	492 aa		6.1	□□□□□ -1.43
LINC01140-208	ENST00000587165	GOPC	Q9HD26	462 aa		6.1	□□□□□ -1.43
LINC01140-208	ENST00000587165	HELLS	Q9NRZ9	838 aa		6.1	□□□□□ -1.43
LINC01140-208	ENST00000587165	DIAPH3	Q9NSV4	1193 aa		6.1	□□□□□ -1.43
LINC01140-208	ENST00000587165	STAP2	Q9UGK3	403 aa		6.1	□□□□□ -1.43
LINC01140-208	ENST00000587165	IVNS1ABP	Q9Y6Y0	642 aa		6.1	□□□□□ -1.43
LINC01140-208	ENST00000587165	GSG1L2	A8MUP6	293 aa		6.09	□□□□□ -1.43
LINC01140-208	ENST00000587165	PATL2	C9JE40	543 aa	Known RBP	6.09	□□□□□ -1.43
LINC01140-208	ENST00000587165		M0R2C6	588 aa		6.09	□□□□□ -1.43
LINC01140-208	ENST00000587165	AKR1B1	P15121	316 aa		6.09	□□□□□ -1.43
LINC01140-208	ENST00000587165	RGS19	P49795	217 aa		6.09	□□□□□ -1.43
LINC01140-208	ENST00000587165	NUCB1	Q02818	461 aa		6.09	□□□□□ -1.43
LINC01140-208	ENST00000587165	PRKCZ	Q05513	592 aa		6.09	□□□□□ -1.43
LINC01140-208	ENST00000587165	SLFNL1	Q499Z3	407 aa		6.09	□□□□□ -1.43
LINC01140-208	ENST00000587165	WDR78	Q5VTH9	848 aa		6.09	□□□□□ -1.43
LINC01140-208	ENST00000587165	CTR9	Q6PD62	1173 aa		6.09	□□□□□ -1.43
LINC01140-208	ENST00000587165	PPP4R3CP	Q6ZMV5	832 aa		6.09	□□□□□ -1.43
LINC01140-208	ENST00000587165	TRMT44	Q8IYL2	757 aa	Known RBP	6.09	□□□□□ -1.43
LINC01140-208	ENST00000587165	ZNF444	Q8N0Y2	327 aa	Predicted RBP	6.09	□□□□□ -1.43
LINC01140-208	ENST00000587165	MB21D1	Q8N884	522 aa		6.09	□□□□□ -1.43
LINC01140-208	ENST00000587165	SLC44A5	Q8NCS7	719 aa		6.09	□□□□□ -1.43
LINC01140-208	ENST00000587165	RILPL2	Q969X0	211 aa		6.09	□□□□□ -1.43
LINC01140-208	ENST00000587165	ZNF333	Q96JL9	665 aa		6.09	□□□□□ -1.43
LINC01140-208	ENST00000587165	RPAP3	Q9H6T3	665 aa	Predicted RBP	6.09	□□□□□ -1.43
LINC01140-208	ENST00000587165	HOXC10	Q9NYD6	342 aa		6.09	□□□□□ -1.43
LINC01140-208	ENST00000587165	MORF4L1	Q9UBU8	362 aa		6.09	□□□□□ -1.43
LINC01140-208	ENST00000587165	ISY1	Q9ULR0	285 aa	Known RBP	6.09	□□□□□ -1.43
LINC01140-208	ENST00000587165	RABGAP1	Q9Y3P9	1069 aa		6.09	□□□□□ -1.43
LINC01140-208	ENST00000587165	CTDP1	Q9Y5B0	961 aa	Predicted RBP	6.09	□□□□□ -1.43
LINC01140-208	ENST00000587165	LAMB1	P07942	1786 aa		6.08	□□□□□ -1.44
LINC01140-208	ENST00000587165	ROBO3	Q96MS0	1386 aa		6.08	□□□□□ -1.44
LINC01140-208	ENST00000587165	CYP2D7	A0A087X1C5	515 aa		6.08	□□□□□ -1.44
LINC01140-208	ENST00000587165	WDR46	O15213	610 aa	Known RBP	6.08	□□□□□ -1.44
LINC01140-208	ENST00000587165	ADCY3	O60266	1144 aa		6.08	□□□□□ -1.44
LINC01140-208	ENST00000587165	FLOT1	O75955	427 aa		6.08	□□□□□ -1.44
LINC01140-208	ENST00000587165	TSPY3	P0CV98	308 aa		6.08	□□□□□ -1.44
LINC01140-208	ENST00000587165	TSPY8	P0CW00	308 aa		6.08	□□□□□ -1.44
LINC01140-208	ENST00000587165	CAPN2	P17655	700 aa		6.08	□□□□□ -1.44
LINC01140-208	ENST00000587165	COPB2	P35606	906 aa		6.08	□□□□□ -1.44
LINC01140-208	ENST00000587165	RGS2	P41220	211 aa		6.08	□□□□□ -1.44
LINC01140-208	ENST00000587165	FLT3LG	P49771	235 aa		6.08	□□□□□ -1.44
LINC01140-208	ENST00000587165	ERVK-9	P63128	1117 aa		6.08	□□□□□ -1.44
LINC01140-208	ENST00000587165	ERVK-24	P63145	666 aa		6.08	□□□□□ -1.44
LINC01140-208	ENST00000587165	PPARA	Q07869	468 aa		6.08	□□□□□ -1.44
LINC01140-208	ENST00000587165	IRF5	Q13568	498 aa		6.08	□□□□□ -1.44
LINC01140-208	ENST00000587165	SHROOM1	Q2M3G4	852 aa	Predicted RBP	6.08	□□□□□ -1.44
LINC01140-208	ENST00000587165	MCMDC2	Q4G0Z9	681 aa		6.08	□□□□□ -1.44
LINC01140-208	ENST00000587165	SAMD1	Q6SPF0	538 aa	Predicted RBP	6.08	□□□□□ -1.44
LINC01140-208	ENST00000587165	CATSPERG	Q6ZRH7	1159 aa		6.08	□□□□□ -1.44
LINC01140-208	ENST00000587165	PLEKHH3	Q7Z736	793 aa		6.08	□□□□□ -1.44
LINC01140-208	ENST00000587165	IFNL3	Q8IZI9	196 aa		6.08	□□□□□ -1.44
LINC01140-208	ENST00000587165	ACER1	Q8TDN7	264 aa		6.08	□□□□□ -1.44
LINC01140-208	ENST00000587165	PXYLP1	Q8TE99	480 aa		6.08	□□□□□ -1.44
LINC01140-208	ENST00000587165	SH3TC2	Q8TF17	1288 aa		6.08	□□□□□ -1.44
LINC01140-208	ENST00000587165	P2RX7	Q99572	595 aa	Known RBP	6.08	□□□□□ -1.44
LINC01140-208	ENST00000587165	NUDT12	Q9BQG2	462 aa		6.08	□□□□□ -1.44
LINC01140-208	ENST00000587165	VCPKMT	Q9H867	229 aa		6.08	□□□□□ -1.44
LINC01140-208	ENST00000587165	TOMM22	Q9NS69	142 aa		6.08	□□□□□ -1.44
LINC01140-208	ENST00000587165	EMILIN3	Q9NT22	766 aa		6.08	□□□□□ -1.44
LINC01140-208	ENST00000587165	SLC5A4	Q9NY91	659 aa		6.08	□□□□□ -1.44
LINC01140-208	ENST00000587165	TMX2	Q9Y320	296 aa		6.08	□□□□□ -1.44
LINC01140-208	ENST00000587165	NAV1	Q8NEY1	1877 aa		6.08	□□□□□ -1.44
LINC01140-208	ENST00000587165	MYH1	P12882	1939 aa		6.07	□□□□□ -1.44
LINC01140-208	ENST00000587165	CCDC171	Q6TFL3	1326 aa		6.07	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms