RNA–Protein interactions for RNA: ENST00000587098.1

CCDC130-207, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 617 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-207ENST00000587098 BCRP11274 1271 aa17.49■□□□□ 0.39
CCDC130-207ENST00000587098 GSPT1P15170 499 aaKnown RBP17.49■□□□□ 0.39
CCDC130-207ENST00000587098 PABPC4Q13310 644 aaKnown RBP eCLIP17.49■□□□□ 0.39
CCDC130-207ENST00000587098 ZYXQ15942 572 aaKnown RBP17.49■□□□□ 0.39
CCDC130-207ENST00000587098 PKN2Q16513 984 aaKnown RBP17.49■□□□□ 0.39
CCDC130-207ENST00000587098 ZNF589Q86UQ0 364 aaPredicted RBP17.49■□□□□ 0.39
CCDC130-207ENST00000587098 SIAH1Q8IUQ4 282 aa17.49■□□□□ 0.39
CCDC130-207ENST00000587098 KIAA1683Q9H0B3 1180 aa17.49■□□□□ 0.39
CCDC130-207ENST00000587098 MKNK2Q9HBH9 465 aa17.49■□□□□ 0.39
CCDC130-207ENST00000587098 A0A1W2PRG0 241 aa17.48■□□□□ 0.39
CCDC130-207ENST00000587098 RASA1P20936 1047 aa17.48■□□□□ 0.39
CCDC130-207ENST00000587098 OSBPP22059 807 aa17.48■□□□□ 0.39
CCDC130-207ENST00000587098 HOXA7P31268 230 aaPredicted RBP17.48■□□□□ 0.39
CCDC130-207ENST00000587098 LACTBP83111 547 aaPredicted RBP17.48■□□□□ 0.39
CCDC130-207ENST00000587098 ALX1Q15699 326 aa17.48■□□□□ 0.39
CCDC130-207ENST00000587098 C12orf42Q96LP6 360 aa17.48■□□□□ 0.39
CCDC130-207ENST00000587098 FEZ1Q99689 392 aa17.48■□□□□ 0.39
CCDC130-207ENST00000587098 ARHGAP39Q9C0H5 1083 aa17.48■□□□□ 0.39
CCDC130-207ENST00000587098 ASCC2Q9H1I8 757 aaPredicted RBP17.48■□□□□ 0.39
CCDC130-207ENST00000587098 EFCC1Q9HA90 598 aa17.48■□□□□ 0.39
CCDC130-207ENST00000587098 PNMA3Q9UL41 463 aa17.48■□□□□ 0.39
CCDC130-207ENST00000587098 MYH8P13535 1937 aa17.48■□□□□ 0.39
CCDC130-207ENST00000587098 ECM2O94769 699 aaPredicted RBP17.47■□□□□ 0.39
CCDC130-207ENST00000587098 HSPD1P10809 573 aaKnown RBP17.47■□□□□ 0.39
CCDC130-207ENST00000587098 USP14P54578 494 aa17.47■□□□□ 0.39
CCDC130-207ENST00000587098 PPARAQ07869 468 aa17.47■□□□□ 0.39
CCDC130-207ENST00000587098 CWC27Q6UX04 472 aaKnown RBP17.47■□□□□ 0.39
CCDC130-207ENST00000587098 CENPQQ7L2Z9 268 aaPredicted RBP17.47■□□□□ 0.39
CCDC130-207ENST00000587098 CLEC10AQ8IUN9 316 aa17.47■□□□□ 0.39
CCDC130-207ENST00000587098 SMCR8Q8TEV9 937 aaPredicted RBP17.47■□□□□ 0.39
CCDC130-207ENST00000587098 P2RX7Q99572 595 aaKnown RBP17.47■□□□□ 0.39
CCDC130-207ENST00000587098 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.47■□□□□ 0.39
CCDC130-207ENST00000587098 ROBO3Q96MS0 1386 aa17.47■□□□□ 0.39
CCDC130-207ENST00000587098 LOC285556D6RIA3 1793 aa17.47■□□□□ 0.39
CCDC130-207ENST00000587098 CCDC171Q6TFL3 1326 aa17.47■□□□□ 0.39
CCDC130-207ENST00000587098 HIP1O00291 1037 aa17.46■□□□□ 0.39
CCDC130-207ENST00000587098 PRDM1O75626 825 aa17.46■□□□□ 0.39
CCDC130-207ENST00000587098 CAPN15O75808 1086 aa17.46■□□□□ 0.39
CCDC130-207ENST00000587098 FGAP02671 866 aa17.46■□□□□ 0.39
CCDC130-207ENST00000587098 CTGFP29279 349 aa17.46■□□□□ 0.39
CCDC130-207ENST00000587098 KIF22Q14807 665 aa17.46■□□□□ 0.39
CCDC130-207ENST00000587098 FBXO46Q6PJ61 603 aaPredicted RBP17.46■□□□□ 0.39
CCDC130-207ENST00000587098 ZNF444Q8N0Y2 327 aaPredicted RBP17.46■□□□□ 0.39
CCDC130-207ENST00000587098 DIAPH3Q9NSV4 1193 aa17.46■□□□□ 0.39
CCDC130-207ENST00000587098 IRX3P78415 501 aaPredicted RBP17.45■□□□□ 0.38
CCDC130-207ENST00000587098 ICA1Q05084 483 aa17.45■□□□□ 0.38
CCDC130-207ENST00000587098 CTDSPL2Q05D32 466 aa17.45■□□□□ 0.38
CCDC130-207ENST00000587098 ARHGEF6Q15052 776 aa17.45■□□□□ 0.38
CCDC130-207ENST00000587098 ANKRD13CQ8N6S4 541 aa17.45■□□□□ 0.38
CCDC130-207ENST00000587098 KANSL2Q9H9L4 492 aa17.45■□□□□ 0.38
CCDC130-207ENST00000587098 USP17L15C9J2P7 530 aa17.44■□□□□ 0.38
CCDC130-207ENST00000587098 USP17L13C9JLJ4 530 aa17.44■□□□□ 0.38
CCDC130-207ENST00000587098 USP17L11C9JVI0 530 aa17.44■□□□□ 0.38
CCDC130-207ENST00000587098 USP17L18D6R9N7 530 aa17.44■□□□□ 0.38
CCDC130-207ENST00000587098 USP17L22D6RA61 530 aa17.44■□□□□ 0.38
CCDC130-207ENST00000587098 USP17L17D6RBQ6 530 aa17.44■□□□□ 0.38
CCDC130-207ENST00000587098 USP17L19D6RCP7 530 aa17.44■□□□□ 0.38
CCDC130-207ENST00000587098 USP17L20D6RJB6 530 aa17.44■□□□□ 0.38
CCDC130-207ENST00000587098 SLC3A2P08195 630 aaKnown RBP17.44■□□□□ 0.38
CCDC130-207ENST00000587098 EEF2P13639 858 aaKnown RBP17.44■□□□□ 0.38
CCDC130-207ENST00000587098 VCAM1P19320 739 aa17.44■□□□□ 0.38
CCDC130-207ENST00000587098 PSMC4P43686 418 aa17.44■□□□□ 0.38
CCDC130-207ENST00000587098 GCLCP48506 637 aaPredicted RBP17.44■□□□□ 0.38
CCDC130-207ENST00000587098 MFAP1P55081 439 aaKnown RBP17.44■□□□□ 0.38
CCDC130-207ENST00000587098 PDE4BQ07343 736 aa17.44■□□□□ 0.38
CCDC130-207ENST00000587098 USP17L24Q0WX57 530 aa17.44■□□□□ 0.38
CCDC130-207ENST00000587098 KIAA1755Q5JYT7 1200 aa17.44■□□□□ 0.38
CCDC130-207ENST00000587098 ZNF287Q9HBT7 754 aa17.44■□□□□ 0.38
CCDC130-207ENST00000587098 ARHGEF10LQ9HCE6 1279 aa17.44■□□□□ 0.38
CCDC130-207ENST00000587098 INCENPQ9NQS7 918 aa17.44■□□□□ 0.38
CCDC130-207ENST00000587098 HPS5Q9UPZ3 1129 aa17.44■□□□□ 0.38
CCDC130-207ENST00000587098 PTPN22Q9Y2R2 807 aa17.44■□□□□ 0.38
CCDC130-207ENST00000587098 TMX2Q9Y320 296 aa17.44■□□□□ 0.38
CCDC130-207ENST00000587098 TACC3Q9Y6A5 838 aa17.44■□□□□ 0.38
CCDC130-207ENST00000587098 CCDC85CA6NKD9 419 aa17.43■□□□□ 0.38
CCDC130-207ENST00000587098 HERVK_113P62684 666 aa17.43■□□□□ 0.38
CCDC130-207ENST00000587098 ATP2B2Q01814 1243 aa17.43■□□□□ 0.38
CCDC130-207ENST00000587098 CATSPERGQ6ZRH7 1159 aa17.43■□□□□ 0.38
CCDC130-207ENST00000587098 SKAP1Q86WV1 359 aa17.43■□□□□ 0.38
CCDC130-207ENST00000587098 CCDC136Q96JN2 1154 aa17.43■□□□□ 0.38
CCDC130-207ENST00000587098 TRIM47Q96LD4 638 aa17.43■□□□□ 0.38
CCDC130-207ENST00000587098 ANAPC4Q9UJX5 808 aa17.43■□□□□ 0.38
CCDC130-207ENST00000587098 ZSWIM8A7E2V4 1837 aa17.42■□□□□ 0.38
CCDC130-207ENST00000587098 IGKV6D-41A0A0C4DH26 115 aa17.42■□□□□ 0.38
CCDC130-207ENST00000587098 PEX10O60683 326 aa17.42■□□□□ 0.38
CCDC130-207ENST00000587098 FMNL1O95466 1100 aaPredicted RBP17.42■□□□□ 0.38
CCDC130-207ENST00000587098 NEFLP07196 543 aa17.42■□□□□ 0.38
CCDC130-207ENST00000587098 FAM110CQ1W6H9 321 aa17.42■□□□□ 0.38
CCDC130-207ENST00000587098 FAM47AQ5JRC9 791 aa17.42■□□□□ 0.38
CCDC130-207ENST00000587098 POTEEQ6S8J3 1075 aa17.42■□□□□ 0.38
CCDC130-207ENST00000587098 RPAP3Q9H6T3 665 aaPredicted RBP17.42■□□□□ 0.38
CCDC130-207ENST00000587098 VCPKMTQ9H867 229 aa17.42■□□□□ 0.38
CCDC130-207ENST00000587098 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.42■□□□□ 0.38
CCDC130-207ENST00000587098 GNRH1P01148 92 aa17.41■□□□□ 0.38
CCDC130-207ENST00000587098 CENPBP07199 599 aaPredicted RBP17.41■□□□□ 0.38
CCDC130-207ENST00000587098 CHMLP26374 656 aa17.41■□□□□ 0.38
CCDC130-207ENST00000587098 TFAP4Q01664 338 aa17.41■□□□□ 0.38
CCDC130-207ENST00000587098 NEDD1Q8NHV4 660 aa17.41■□□□□ 0.38
CCDC130-207ENST00000587098 IL25Q9H293 177 aa17.41■□□□□ 0.38
CCDC130-207ENST00000587098 SH2D4AQ9H788 454 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms