RNA–Protein interactions for RNA: ENST00000586856.1

ERCC2-209, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-209ENST00000586856 IFNL3Q8IZI9 196 aa28.77■■■□□ 2.2
ERCC2-209ENST00000586856 ACER1Q8TDN7 264 aa28.77■■■□□ 2.2
ERCC2-209ENST00000586856 FAM227BQ96M60 508 aa28.77■■■□□ 2.2
ERCC2-209ENST00000586856 ARHGAP39Q9C0H5 1083 aa28.77■■■□□ 2.2
ERCC2-209ENST00000586856 HELLSQ9NRZ9 838 aa28.77■■■□□ 2.2
ERCC2-209ENST00000586856 GREB1LQ9C091 1923 aaPredicted RBP28.77■■■□□ 2.2
ERCC2-209ENST00000586856 KIF22Q14807 665 aa28.76■■■□□ 2.19
ERCC2-209ENST00000586856 ZYXQ15942 572 aaKnown RBP28.76■■■□□ 2.19
ERCC2-209ENST00000586856 EMILIN3Q9NT22 766 aa28.76■■■□□ 2.19
ERCC2-209ENST00000586856 HPS5Q9UPZ3 1129 aa28.76■■■□□ 2.19
ERCC2-209ENST00000586856 MGAMO43451 1857 aa28.76■■■□□ 2.19
ERCC2-209ENST00000586856 NMIQ13287 307 aaPredicted RBP28.75■■■□□ 2.19
ERCC2-209ENST00000586856 C12orf42Q96LP6 360 aa28.75■■■□□ 2.19
ERCC2-209ENST00000586856 CCDC17Q96LX7 622 aa28.75■■■□□ 2.19
ERCC2-209ENST00000586856 KIAA1683Q9H0B3 1180 aa28.75■■■□□ 2.19
ERCC2-209ENST00000586856 NAPBQ9H115 298 aa28.75■■■□□ 2.19
ERCC2-209ENST00000586856 ASCC2Q9H1I8 757 aaPredicted RBP28.75■■■□□ 2.19
ERCC2-209ENST00000586856 CCDC85CA6NKD9 419 aa28.74■■■□□ 2.19
ERCC2-209ENST00000586856 FOXP2O15409 715 aa28.74■■■□□ 2.19
ERCC2-209ENST00000586856 OSBPP22059 807 aa28.74■■■□□ 2.19
ERCC2-209ENST00000586856 ARHGEF6Q15052 776 aa28.74■■■□□ 2.19
ERCC2-209ENST00000586856 CLEC10AQ8IUN9 316 aa28.74■■■□□ 2.19
ERCC2-209ENST00000586856 ECM2O94769 699 aaPredicted RBP28.73■■■□□ 2.19
ERCC2-209ENST00000586856 USP14P54578 494 aa28.73■■■□□ 2.19
ERCC2-209ENST00000586856 IRX3P78415 501 aaPredicted RBP28.73■■■□□ 2.19
ERCC2-209ENST00000586856 STK11IPQ8N1F8 1099 aa28.73■■■□□ 2.19
ERCC2-209ENST00000586856 SDSP20132 328 aa28.72■■■□□ 2.19
ERCC2-209ENST00000586856 CTGFP29279 349 aa28.72■■■□□ 2.19
ERCC2-209ENST00000586856 HOXA7P31268 230 aaPredicted RBP28.72■■■□□ 2.19
ERCC2-209ENST00000586856 ICA1Q05084 483 aa28.72■■■□□ 2.19
ERCC2-209ENST00000586856 MCMDC2Q4G0Z9 681 aa28.72■■■□□ 2.19
ERCC2-209ENST00000586856 PTPN22Q9Y2R2 807 aa28.72■■■□□ 2.19
ERCC2-209ENST00000586856 VPS53Q5VIR6 699 aa28.71■■■□□ 2.19
ERCC2-209ENST00000586856 A0A1W2PRG0 241 aa28.7■■■□□ 2.18
ERCC2-209ENST00000586856 VCAM1P19320 739 aa28.7■■■□□ 2.18
ERCC2-209ENST00000586856 RASA1P20936 1047 aa28.7■■■□□ 2.18
ERCC2-209ENST00000586856 ANKRD13CQ8N6S4 541 aa28.7■■■□□ 2.18
ERCC2-209ENST00000586856 TRIM47Q96LD4 638 aa28.7■■■□□ 2.18
ERCC2-209ENST00000586856 PSMC4P43686 418 aa28.69■■■□□ 2.18
ERCC2-209ENST00000586856 GCLCP48506 637 aaPredicted RBP28.69■■■□□ 2.18
ERCC2-209ENST00000586856 PPARAQ07869 468 aa28.69■■■□□ 2.18
ERCC2-209ENST00000586856 TTC22Q5TAA0 569 aa28.69■■■□□ 2.18
ERCC2-209ENST00000586856 ZNF589Q86UQ0 364 aaPredicted RBP28.69■■■□□ 2.18
ERCC2-209ENST00000586856 MKNK2Q9HBH9 465 aa28.69■■■□□ 2.18
ERCC2-209ENST00000586856 CCDC171Q6TFL3 1326 aa28.69■■■□□ 2.18
ERCC2-209ENST00000586856 GNRH1P01148 92 aa28.68■■■□□ 2.18
ERCC2-209ENST00000586856 GSPT1P15170 499 aaKnown RBP28.68■■■□□ 2.18
ERCC2-209ENST00000586856 FAM110CQ1W6H9 321 aa28.68■■■□□ 2.18
ERCC2-209ENST00000586856 ARHGEF10LQ9HCE6 1279 aa28.68■■■□□ 2.18
ERCC2-209ENST00000586856 DIAPH3Q9NSV4 1193 aa28.68■■■□□ 2.18
ERCC2-209ENST00000586856 PRDM1O75626 825 aa28.67■■■□□ 2.18
ERCC2-209ENST00000586856 FCGRTP55899 365 aa28.67■■■□□ 2.18
ERCC2-209ENST00000586856 SIAH1Q8IUQ4 282 aa28.67■■■□□ 2.18
ERCC2-209ENST00000586856 P2RX7Q99572 595 aaKnown RBP28.67■■■□□ 2.18
ERCC2-209ENST00000586856 ZNF287Q9HBT7 754 aa28.67■■■□□ 2.18
ERCC2-209ENST00000586856 FMNL1O95466 1100 aaPredicted RBP28.66■■■□□ 2.18
ERCC2-209ENST00000586856 SLC3A2P08195 630 aaKnown RBP28.66■■■□□ 2.18
ERCC2-209ENST00000586856 HERVK_113P62684 666 aa28.66■■■□□ 2.18
ERCC2-209ENST00000586856 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.66■■■□□ 2.18
ERCC2-209ENST00000586856 SH2D4AQ9H788 454 aa28.66■■■□□ 2.18
ERCC2-209ENST00000586856 KANSL2Q9H9L4 492 aa28.66■■■□□ 2.18
ERCC2-209ENST00000586856 PTCH2Q9Y6C5 1203 aa28.66■■■□□ 2.18
ERCC2-209ENST00000586856 USP17L15C9J2P7 530 aa28.65■■■□□ 2.18
ERCC2-209ENST00000586856 USP17L13C9JLJ4 530 aa28.65■■■□□ 2.18
ERCC2-209ENST00000586856 USP17L11C9JVI0 530 aa28.65■■■□□ 2.18
ERCC2-209ENST00000586856 USP17L18D6R9N7 530 aa28.65■■■□□ 2.18
ERCC2-209ENST00000586856 USP17L22D6RA61 530 aa28.65■■■□□ 2.18
ERCC2-209ENST00000586856 USP17L17D6RBQ6 530 aa28.65■■■□□ 2.18
ERCC2-209ENST00000586856 USP17L19D6RCP7 530 aa28.65■■■□□ 2.18
ERCC2-209ENST00000586856 USP17L20D6RJB6 530 aa28.65■■■□□ 2.18
ERCC2-209ENST00000586856 HIP1O00291 1037 aa28.65■■■□□ 2.18
ERCC2-209ENST00000586856 USP17L24Q0WX57 530 aa28.65■■■□□ 2.18
ERCC2-209ENST00000586856 TMX2Q9Y320 296 aa28.65■■■□□ 2.18
ERCC2-209ENST00000586856 EEF2P13639 858 aaKnown RBP28.64■■■□□ 2.18
ERCC2-209ENST00000586856 ATP2B2Q01814 1243 aa28.64■■■□□ 2.18
ERCC2-209ENST00000586856 PDE4BQ07343 736 aa28.64■■■□□ 2.18
ERCC2-209ENST00000586856 ALX1Q15699 326 aa28.64■■■□□ 2.18
ERCC2-209ENST00000586856 CWC27Q6UX04 472 aaKnown RBP28.64■■■□□ 2.18
ERCC2-209ENST00000586856 RPAP3Q9H6T3 665 aaPredicted RBP28.64■■■□□ 2.18
ERCC2-209ENST00000586856 SRRDQ9UH36 339 aa28.64■■■□□ 2.18
ERCC2-209ENST00000586856 HSPD1P10809 573 aaKnown RBP28.63■■■□□ 2.17
ERCC2-209ENST00000586856 PRMT2P55345 433 aa28.63■■■□□ 2.17
ERCC2-209ENST00000586856 CATSPERGQ6ZRH7 1159 aa28.63■■■□□ 2.17
ERCC2-209ENST00000586856 MORF4L1Q9UBU8 362 aa28.63■■■□□ 2.17
ERCC2-209ENST00000586856 ZMYM6O95789 1325 aa28.63■■■□□ 2.17
ERCC2-209ENST00000586856 MYH4Q9Y623 1939 aa28.63■■■□□ 2.17
ERCC2-209ENST00000586856 PLIN4Q96Q06 1357 aa28.62■■■□□ 2.17
ERCC2-209ENST00000586856 MFAP1P55081 439 aaKnown RBP28.62■■■□□ 2.17
ERCC2-209ENST00000586856 CTDSPL2Q05D32 466 aa28.62■■■□□ 2.17
ERCC2-209ENST00000586856 KIAA1755Q5JYT7 1200 aa28.62■■■□□ 2.17
ERCC2-209ENST00000586856 ZNF444Q8N0Y2 327 aaPredicted RBP28.62■■■□□ 2.17
ERCC2-209ENST00000586856 GTF3C2Q8WUA4 911 aaPredicted RBP28.62■■■□□ 2.17
ERCC2-209ENST00000586856 LPAR1Q92633 364 aa28.62■■■□□ 2.17
ERCC2-209ENST00000586856 VCPKMTQ9H867 229 aa28.62■■■□□ 2.17
ERCC2-209ENST00000586856 TXNRD2Q9NNW7 524 aa28.62■■■□□ 2.17
ERCC2-209ENST00000586856 MYPNQ86TC9 1320 aa28.62■■■□□ 2.17
ERCC2-209ENST00000586856 LAMA4Q16363 1823 aa28.62■■■□□ 2.17
ERCC2-209ENST00000586856 PARP14Q460N5 1801 aa28.62■■■□□ 2.17
ERCC2-209ENST00000586856 HOXD10P28358 340 aa28.61■■■□□ 2.17
ERCC2-209ENST00000586856 CENPQQ7L2Z9 268 aaPredicted RBP28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms